FFCP PHASE1:Mm9::chr2:131178593..131178625,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=51902|HGNC=|MCL_coexpression_id=60|UniProt=Q8BGI1|association_with_transcript=0bp_to_ENSMUST00000059372,ENSMUST00000148058_5end|description=CAGE_peak_2_at_Rnf24_5end|id=chr2:131178593..131178625,-|ontology_enrichment_celltype=CL:0000117!3.50e-14!23;CL:0000337!3.50e-14!23;CL:0000393!2.17e-11!39;CL:0000211!2.17e-11!39;CL:0000540!2.49e-11!33;CL:0000047!2.49e-11!33;CL:0000031!2.49e-11!33;CL:0000404!2.49e-11!33;CL:0002319!8.84e-11!43;CL:0000221!1.10e-10!44;CL:0000133!1.10e-10!44;CL:0000055!1.19e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.96e-14,23;CL:0000337,2.96e-14,23;CL:0000393,1.91e-11,39;CL:0000211,1.91e-11,39;CL:0000540,2.19e-11,33;CL:0000047,2.19e-11,33;CL:0000031,2.19e-11,33;CL:0000404,2.19e-11,33;CL:0002319,7.83e-11,43;CL:0000221,9.78e-11,44;CL:0000133,9.78e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.73e-24!73;UBERON:0005743!1.73e-24!73;UBERON:0000073!8.63e-24!75;UBERON:0001016!8.63e-24!75;UBERON:0001049!3.60e-23!52;UBERON:0005068!3.60e-23!52;UBERON:0006241!3.60e-23!52;UBERON:0007135!3.60e-23!52;UBERON:0000033!4.53e-22!63;UBERON:0000955!4.77e-22!50;UBERON:0006238!4.77e-22!50;UBERON:0002616!1.65e-21!49;UBERON:0002346!6.70e-21!71;UBERON:0003075!6.70e-21!71;UBERON:0007284!6.70e-21!71;UBERON:0002020!6.89e-20!34;UBERON:0003056!3.66e-19!49;UBERON:0004121!5.24e-19!102;UBERON:0000924!5.24e-19!102;UBERON:0006601!5.24e-19!102;UBERON:0003080!9.69e-18!40;UBERON:0002791!2.34e-17!29;UBERON:0003528!2.34e-17!29;UBERON:0001893!2.34e-17!29;UBERON:0002780!3.72e-17!39;UBERON:0001890!3.72e-17!39;UBERON:0006240!3.72e-17!39;UBERON:0000956!1.22e-12!21;UBERON:0001869!1.22e-12!21;UBERON:0000203!1.22e-12!21;UBERON:0000153!3.39e-11!94;UBERON:0002619!3.44e-10!17;UBERON:0007811!1.78e-09!86;UBERON:0000025!2.74e-09!114;UBERON:0004111!6.67e-08!122;UBERON:0002021!7.50e-07!10;UBERON:0000411!7.50e-07!10;UBERON:0001950!7.50e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.28e-24,73;UBERON:0000073,2.27e-24,54;UBERON:0001016,6.45e-24,75;UBERON:0002346,8.05e-24,64;UBERON:0003075,8.05e-24,64;UBERON:0007284,8.05e-24,64;UBERON:0001049,2.71e-23,52;UBERON:0005068,2.71e-23,52;UBERON:0006241,2.71e-23,52;UBERON:0007135,2.71e-23,52;UBERON:0004121,4.33e-21,95;UBERON:0000924,4.33e-21,95;UBERON:0006601,4.33e-21,95;UBERON:0010371,1.01e-20,73;UBERON:0000955,1.59e-20,47;UBERON:0006238,1.59e-20,47;UBERON:0002616,5.40e-20,46;UBERON:0002020,5.42e-20,34;UBERON:0003056,2.91e-19,49;UBERON:0003080,7.84e-18,40;UBERON:0003528,1.90e-17,29;UBERON:0002791,1.90e-17,29;UBERON:0001893,1.90e-17,29;UBERON:0002780,3.04e-17,39;UBERON:0001890,3.04e-17,39;UBERON:0006240,3.04e-17,39;UBERON:0010314,9.48e-16,92;UBERON:0000956,1.05e-12,21;UBERON:0001869,1.05e-12,21;UBERON:0000203,1.05e-12,21;UBERON:0002619,3.08e-10,17;UBERON:0000025,3.40e-09,114;UBERON:0004111,8.91e-08,122;UBERON:0002021,7.00e-07,10;UBERON:0000411,7.00e-07,10;UBERON:0001950,7.00e-07,10|phase1_expression=4.00372117761985,3.14077866875425,1.36499771816861,0.60492842261366,0,0.503637815735669,0.467225281191051,1.16210991097419,0.422366166455,1.40438715793196,0.513653904676515,0.957265907944037,0.513602189793617,0.262261207256992,0.333109761815663,0.809901069559304,0,0.473193248037357,0.137114433605739,1.27316895539409,8.33424243480484,0.695036658406197,1.04479915655574,0.47997726838022,1.60586496747019,1.14846392823004,2.15380998079537,0.646413698057667,0.760093677825496,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0,0.332469290716985,0,5.02237956884289,3.906676722619,4.18818995179039,7.05877785637217,3.41522742479223,5.34061388334269,5.03587271902309,5.5757312170733,3.30384153891027,4.69434806608824,3.48840250208714,3.73466510648602,5.44403717407994,2.65974201088189,2.87505128729943,0.671130424230945,0.725362142011344,0.672187598284928,4.11615097657515,1.43266719969378,2.57836046138721,13.7575193384526,13.7537654610729,17.747279298173,2.71075625655306,1.77858959222228,1.3498495759221,0.988866362566974,1.4209602298922,2.99600110518405,1.92109152660777,12.5464430893258,13.2305819565057,17.2466468308133,6.85562362569129,8.39300455616131,15.5563315002992,15.814502718009,16.5459381589804,6.60695285996332,10.853423737241,8.44835932909339,16.6176722540044,13.2657083223494,18.7528813400434,8.37548997004143,9.56696437053856,6.72312290217964,6.48182888042069,8.25755748634797,13.7935589910722,2.12033341332915,2.26714680320357,1.44932244350839,1.72084775396277,2.03991400112325,0.539703191637817,1.94932925234301,0.448026887097336,2.52799956237153,4.60161870960756,4.1565760736459,3.18005617059306,2.81686839553361,3.84979432242953,0,0,1.29894624606728,2.28023878927589,1.51657333504435,1.82694207550496,1.03575153458869,1.92974780784272,2.08182392119363,1.82679286987285,1.61430848079241,1.80867168663147,3.29248379979973,2.13633205260448,0.247194967734374,4.04878199375753,0.884610551949874,4.04417124868523,0.662524555381181,1.45462575940567,0,6.14839673724249,5.44561437714983,0.255457055208591,1.7972268675888,1.1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| ||
|EntrezGene=51902 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q8BGI1 | |||
|association_with_transcript=0bp_to_ENSMUST00000059372,ENSMUST00000148058_5end | |||
|description=CAGE_peak_2_at_Rnf24_5end | |||
|id=chr2:131178593..131178625,- | |||
|ontology_enrichment_celltype=CL:0000117!3.50e-14!23;CL:0000337!3.50e-14!23;CL:0000393!2.17e-11!39;CL:0000211!2.17e-11!39;CL:0000540!2.49e-11!33;CL:0000047!2.49e-11!33;CL:0000031!2.49e-11!33;CL:0000404!2.49e-11!33;CL:0002319!8.84e-11!43;CL:0000221!1.10e-10!44;CL:0000133!1.10e-10!44;CL:0000055!1.19e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.96e-14,23;CL:0000337,2.96e-14,23;CL:0000393,1.91e-11,39;CL:0000211,1.91e-11,39;CL:0000540,2.19e-11,33;CL:0000047,2.19e-11,33;CL:0000031,2.19e-11,33;CL:0000404,2.19e-11,33;CL:0002319,7.83e-11,43;CL:0000221,9.78e-11,44;CL:0000133,9.78e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.73e-24!73;UBERON:0005743!1.73e-24!73;UBERON:0000073!8.63e-24!75;UBERON:0001016!8.63e-24!75;UBERON:0001049!3.60e-23!52;UBERON:0005068!3.60e-23!52;UBERON:0006241!3.60e-23!52;UBERON:0007135!3.60e-23!52;UBERON:0000033!4.53e-22!63;UBERON:0000955!4.77e-22!50;UBERON:0006238!4.77e-22!50;UBERON:0002616!1.65e-21!49;UBERON:0002346!6.70e-21!71;UBERON:0003075!6.70e-21!71;UBERON:0007284!6.70e-21!71;UBERON:0002020!6.89e-20!34;UBERON:0003056!3.66e-19!49;UBERON:0004121!5.24e-19!102;UBERON:0000924!5.24e-19!102;UBERON:0006601!5.24e-19!102;UBERON:0003080!9.69e-18!40;UBERON:0002791!2.34e-17!29;UBERON:0003528!2.34e-17!29;UBERON:0001893!2.34e-17!29;UBERON:0002780!3.72e-17!39;UBERON:0001890!3.72e-17!39;UBERON:0006240!3.72e-17!39;UBERON:0000956!1.22e-12!21;UBERON:0001869!1.22e-12!21;UBERON:0000203!1.22e-12!21;UBERON:0000153!3.39e-11!94;UBERON:0002619!3.44e-10!17;UBERON:0007811!1.78e-09!86;UBERON:0000025!2.74e-09!114;UBERON:0004111!6.67e-08!122;UBERON:0002021!7.50e-07!10;UBERON:0000411!7.50e-07!10;UBERON:0001950!7.50e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.28e-24,73;UBERON:0000073,2.27e-24,54;UBERON:0001016,6.45e-24,75;UBERON:0002346,8.05e-24,64;UBERON:0003075,8.05e-24,64;UBERON:0007284,8.05e-24,64;UBERON:0001049,2.71e-23,52;UBERON:0005068,2.71e-23,52;UBERON:0006241,2.71e-23,52;UBERON:0007135,2.71e-23,52;UBERON:0004121,4.33e-21,95;UBERON:0000924,4.33e-21,95;UBERON:0006601,4.33e-21,95;UBERON:0010371,1.01e-20,73;UBERON:0000955,1.59e-20,47;UBERON:0006238,1.59e-20,47;UBERON:0002616,5.40e-20,46;UBERON:0002020,5.42e-20,34;UBERON:0003056,2.91e-19,49;UBERON:0003080,7.84e-18,40;UBERON:0003528,1.90e-17,29;UBERON:0002791,1.90e-17,29;UBERON:0001893,1.90e-17,29;UBERON:0002780,3.04e-17,39;UBERON:0001890,3.04e-17,39;UBERON:0006240,3.04e-17,39;UBERON:0010314,9.48e-16,92;UBERON:0000956,1.05e-12,21;UBERON:0001869,1.05e-12,21;UBERON:0000203,1.05e-12,21;UBERON:0002619,3.08e-10,17;UBERON:0000025,3.40e-09,114;UBERON:0004111,8.91e-08,122;UBERON:0002021,7.00e-07,10;UBERON:0000411,7.00e-07,10;UBERON:0001950,7.00e-07,10 | |||
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| |||
|short_description=p2@Rnf24 | |||
}} |
Revision as of 22:06, 13 September 2013
Short description: | p2@Rnf24 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rnf24_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000059372, ENSMUST00000148058_5end |
EntrezGene: | Rnf24 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.96e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.96e-14 | 23 |
electrically responsive cell | 1.91e-11 | 39 |
electrically active cell | 1.91e-11 | 39 |
neuron | 2.19e-11 | 33 |
neuronal stem cell | 2.19e-11 | 33 |
neuroblast | 2.19e-11 | 33 |
electrically signaling cell | 2.19e-11 | 33 |
neural cell | 7.83e-11 | 43 |
ectodermal cell | 9.78e-11 | 44 |
neurectodermal cell | 9.78e-11 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.