FFCP PHASE1:Mm9::chr2:125608510..125608538,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70354|HGNC=|MCL_coexpression_id=28|UniProt=A2AQE2,E9Q1S2,Q8C7M0|association_with_transcript=67bp_to_ENSMUST00000053699,ENSMUST00000167822,NM_177608,uc008mcz.1_5end|description=CAGE_peak_2_at_Secisbp2l_5end|id=chr2:125608510..125608538,-|ontology_enrichment_celltype=CL:0000117!5.29e-09!23;CL:0000337!5.29e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.29e-09,23;CL:0000337,5.29e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.77e-13!94;UBERON:0002020!5.45e-13!34;UBERON:0007811!7.38e-13!86;UBERON:0000033!3.72e-12!63;UBERON:0004121!9.42e-12!102;UBERON:0000924!9.42e-12!102;UBERON:0006601!9.42e-12!102;UBERON:0001049!1.02e-11!52;UBERON:0005068!1.02e-11!52;UBERON:0006241!1.02e-11!52;UBERON:0007135!1.02e-11!52;UBERON:0002791!2.59e-11!29;UBERON:0003528!2.59e-11!29;UBERON:0001893!2.59e-11!29;UBERON:0000955!3.32e-11!50;UBERON:0006238!3.32e-11!50;UBERON:0002616!1.23e-10!49;UBERON:0002346!1.37e-10!71;UBERON:0003075!1.37e-10!71;UBERON:0007284!1.37e-10!71;UBERON:0003056!1.89e-10!49;UBERON:0003080!2.91e-09!40;UBERON:0001017!5.87e-09!73;UBERON:0005743!5.87e-09!73;UBERON:0000073!7.38e-09!75;UBERON:0001016!7.38e-09!75;UBERON:0002780!9.04e-09!39;UBERON:0001890!9.04e-09!39;UBERON:0006240!9.04e-09!39;UBERON:0000956!2.63e-08!21;UBERON:0001869!2.63e-08!21;UBERON:0000203!2.63e-08!21;UBERON:0000064!4.94e-08!99;UBERON:0007023!4.13e-07!51;UBERON:0002021!5.64e-07!10;UBERON:0000411!5.64e-07!10;UBERON:0001950!5.64e-07!10;UBERON:0000468!7.70e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0010371,7.56e-15,73;UBERON:0004121,3.41e-13,95;UBERON:0000924,3.41e-13,95;UBERON:0006601,3.41e-13,95;UBERON:0002020,5.45e-13,34;UBERON:0002346,2.04e-12,64;UBERON:0003075,2.04e-12,64;UBERON:0007284,2.04e-12,64;UBERON:0000073,2.58e-12,54;UBERON:0001049,1.02e-11,52;UBERON:0005068,1.02e-11,52;UBERON:0006241,1.02e-11,52;UBERON:0007135,1.02e-11,52;UBERON:0003528,2.59e-11,29;UBERON:0002791,2.59e-11,29;UBERON:0001893,2.59e-11,29;UBERON:0003056,1.89e-10,49;UBERON:0000955,3.76e-10,47;UBERON:0006238,3.76e-10,47;UBERON:0002616,1.34e-09,46;UBERON:0003080,2.91e-09,40;UBERON:0001017,5.87e-09,73;UBERON:0001016,7.38e-09,75;UBERON:0002780,9.04e-09,39;UBERON:0001890,9.04e-09,39;UBERON:0006240,9.04e-09,39;UBERON:0000956,2.63e-08,21;UBERON:0001869,2.63e-08,21;UBERON:0000203,2.63e-08,21;UBERON:0007023,4.13e-07,51;UBERON:0002021,5.64e-07,10;UBERON:0000411,5.64e-07,10;UBERON:0001950,5.64e-07,10|phase1_expression=9.92922852049723,18.4956966048861,19.1099680543605,13.0059610861937,12.5223932486587,3.69334398206158,7.47560449905682,20.5306084272106,5.63154888606667,6.08567768437183,10.4442960617558,11.9658238493005,18.318478102639,18.5331253128274,6.99530499812892,5.87178275430495,13.2916756844348,13.5648731104042,13.0258711925452,8.48779303596061,16.1582251287033,8.14185799847259,6.79119451761232,8.79958325363737,7.34109699414944,15.5042630311055,7.75371593086335,8.40337807474967,10.8313349090133,12.6015064879965,7.09537634096975,4.44521471421742,4.30545351309199,0,5.19932915552294,2.99222361645286,4.69589519403449,12.5559489221072,7.813353445238,6.80580867165938,9.41170380849623,8.19654581950135,9.71020706062307,10.7012295279241,12.3679856087808,11.1963518818626,10.1710874765245,7.41285531693518,2.85592037554813,7.38833616482277,6.7193482380174,4.31257693094915,7.55021727259814,18.1340535502836,16.4685961579807,9.26133969729409,9.74213695791773,7.73508138416164,25.6941905291689,23.8045940672415,24.719424736741,4.40497891689872,4.4464739805557,6.74924787961049,4.94433181283487,4.2628806896766,4.79360176829448,6.53171119046643,28.2035745479059,18.6308194897733,25.4493203235172,17.7103610330358,15.9025349485162,26.580503429645,24.6322860516867,14.7075005857603,20.9220173898839,21.8345348125671,20.5832754563366,31.2570501920559,23.4208367622169,27.0874952689515,12.8424179540635,18.5711661310454,18.488587980994,24.7488011797881,25.6269025438385,25.1639251864156,13.5549886066399,12.8471652181535,12.7540375028738,4.30211938490693,6.79971333707751,7.55584468292944,18.1937396885347,16.1289679355041,13.3422199125164,6.64678258054425,4.41636207824877,4.94675404314476,16.1969932743183,5.13305909657271,10.1922095882658,21.3320010945999,4.5463118612355,4.30711771307668,4.54972000513305,15.300639882354,34.1798006414267,16.1801931580659,6.59244241711316,10.3518262626128,10.8389283710347,9.3448037142626,14.9337658062345,12.0639927676488,16.8092578059374,19.5209131841881,11.4999371753484,6.95597454773859,8.17113618303456,7.75800405016355,27.9587641827183,27.5213949190854,21.3635640949724,14.3055950916811,4.79260498023681,2.39961092397363,4.82866862877646,29.3589653233452,55.8150735438724,43.6020601831639,36.3292829201858,26.8501230196847,26.3890816590641,32.772735139687,14.9703864859965,11.8186622079588,21.734157225296,143.942229426348,10.6698763229417,8.5063778640385,13.6847218652065,15.6733010549144,22.3159717216355,23.9572656932669,18.4592397382666,53.2928943722372,9.05385570317937,14.5611681729221,14.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| ||
|EntrezGene=70354 | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt=A2AQE2,E9Q1S2,Q8C7M0 | |||
|association_with_transcript=67bp_to_ENSMUST00000053699,ENSMUST00000167822,NM_177608,uc008mcz.1_5end | |||
|description=CAGE_peak_2_at_Secisbp2l_5end | |||
|id=chr2:125608510..125608538,- | |||
|ontology_enrichment_celltype=CL:0000117!5.29e-09!23;CL:0000337!5.29e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.29e-09,23;CL:0000337,5.29e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.77e-13!94;UBERON:0002020!5.45e-13!34;UBERON:0007811!7.38e-13!86;UBERON:0000033!3.72e-12!63;UBERON:0004121!9.42e-12!102;UBERON:0000924!9.42e-12!102;UBERON:0006601!9.42e-12!102;UBERON:0001049!1.02e-11!52;UBERON:0005068!1.02e-11!52;UBERON:0006241!1.02e-11!52;UBERON:0007135!1.02e-11!52;UBERON:0002791!2.59e-11!29;UBERON:0003528!2.59e-11!29;UBERON:0001893!2.59e-11!29;UBERON:0000955!3.32e-11!50;UBERON:0006238!3.32e-11!50;UBERON:0002616!1.23e-10!49;UBERON:0002346!1.37e-10!71;UBERON:0003075!1.37e-10!71;UBERON:0007284!1.37e-10!71;UBERON:0003056!1.89e-10!49;UBERON:0003080!2.91e-09!40;UBERON:0001017!5.87e-09!73;UBERON:0005743!5.87e-09!73;UBERON:0000073!7.38e-09!75;UBERON:0001016!7.38e-09!75;UBERON:0002780!9.04e-09!39;UBERON:0001890!9.04e-09!39;UBERON:0006240!9.04e-09!39;UBERON:0000956!2.63e-08!21;UBERON:0001869!2.63e-08!21;UBERON:0000203!2.63e-08!21;UBERON:0000064!4.94e-08!99;UBERON:0007023!4.13e-07!51;UBERON:0002021!5.64e-07!10;UBERON:0000411!5.64e-07!10;UBERON:0001950!5.64e-07!10;UBERON:0000468!7.70e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,7.56e-15,73;UBERON:0004121,3.41e-13,95;UBERON:0000924,3.41e-13,95;UBERON:0006601,3.41e-13,95;UBERON:0002020,5.45e-13,34;UBERON:0002346,2.04e-12,64;UBERON:0003075,2.04e-12,64;UBERON:0007284,2.04e-12,64;UBERON:0000073,2.58e-12,54;UBERON:0001049,1.02e-11,52;UBERON:0005068,1.02e-11,52;UBERON:0006241,1.02e-11,52;UBERON:0007135,1.02e-11,52;UBERON:0003528,2.59e-11,29;UBERON:0002791,2.59e-11,29;UBERON:0001893,2.59e-11,29;UBERON:0003056,1.89e-10,49;UBERON:0000955,3.76e-10,47;UBERON:0006238,3.76e-10,47;UBERON:0002616,1.34e-09,46;UBERON:0003080,2.91e-09,40;UBERON:0001017,5.87e-09,73;UBERON:0001016,7.38e-09,75;UBERON:0002780,9.04e-09,39;UBERON:0001890,9.04e-09,39;UBERON:0006240,9.04e-09,39;UBERON:0000956,2.63e-08,21;UBERON:0001869,2.63e-08,21;UBERON:0000203,2.63e-08,21;UBERON:0007023,4.13e-07,51;UBERON:0002021,5.64e-07,10;UBERON:0000411,5.64e-07,10;UBERON:0001950,5.64e-07,10 | |||
|phase1_expression=9.92922852049723,18.4956966048861,19.1099680543605,13.0059610861937,12.5223932486587,3.69334398206158,7.47560449905682,20.5306084272106,5.63154888606667,6.08567768437183,10.4442960617558,11.9658238493005,18.318478102639,18.5331253128274,6.99530499812892,5.87178275430495,13.2916756844348,13.5648731104042,13.0258711925452,8.48779303596061,16.1582251287033,8.14185799847259,6.79119451761232,8.79958325363737,7.34109699414944,15.5042630311055,7.75371593086335,8.40337807474967,10.8313349090133,12.6015064879965,7.09537634096975,4.44521471421742,4.30545351309199,0,5.19932915552294,2.99222361645286,4.69589519403449,12.5559489221072,7.813353445238,6.80580867165938,9.41170380849623,8.19654581950135,9.71020706062307,10.7012295279241,12.3679856087808,11.1963518818626,10.1710874765245,7.41285531693518,2.85592037554813,7.38833616482277,6.7193482380174,4.31257693094915,7.55021727259814,18.1340535502836,16.4685961579807,9.26133969729409,9.74213695791773,7.73508138416164,25.6941905291689,23.8045940672415,24.719424736741,4.40497891689872,4.4464739805557,6.74924787961049,4.94433181283487,4.2628806896766,4.79360176829448,6.53171119046643,28.2035745479059,18.6308194897733,25.4493203235172,17.7103610330358,15.9025349485162,26.580503429645,24.6322860516867,14.7075005857603,20.9220173898839,21.8345348125671,20.5832754563366,31.2570501920559,23.4208367622169,27.0874952689515,12.8424179540635,18.5711661310454,18.488587980994,24.7488011797881,25.6269025438385,25.1639251864156,13.5549886066399,12.8471652181535,12.7540375028738,4.30211938490693,6.79971333707751,7.55584468292944,18.1937396885347,16.1289679355041,13.3422199125164,6.64678258054425,4.41636207824877,4.94675404314476,16.1969932743183,5.13305909657271,10.1922095882658,21.3320010945999,4.5463118612355,4.30711771307668,4.54972000513305,15.300639882354,34.1798006414267,16.1801931580659,6.59244241711316,10.3518262626128,10.8389283710347,9.3448037142626,14.9337658062345,12.0639927676488,16.8092578059374,19.5209131841881,11.4999371753484,6.95597454773859,8.17113618303456,7.75800405016355,27.9587641827183,27.5213949190854,21.3635640949724,14.3055950916811,4.79260498023681,2.39961092397363,4.82866862877646,29.3589653233452,55.8150735438724,43.6020601831639,36.3292829201858,26.8501230196847,26.3890816590641,32.772735139687,14.9703864859965,11.8186622079588,21.734157225296,143.942229426348,10.6698763229417,8.5063778640385,13.6847218652065,15.6733010549144,22.3159717216355,23.9572656932669,18.4592397382666,53.2928943722372,9.05385570317937,14.5611681729221,14.6039433056078,15.7820927347854,17.2389294519871,14.626590993931,14.404749548556,9.15557627365069,6.31991868581911,5.1469581422943,5.11494298912067,9.73491130916859,11.9608290590359,10.4435995647389,12.0739815148457,12.3961466000864,11.5700334665534,12.7893669612724,7.51165523918934,14.9459638229977,10.2027106946358,11.1633875573785,12.1603214318784,9.79539915749726,9.00155472693308,12.7496097822353,41.6374098156972,39.0008480917488,25.4422462897524,19.5693419331023,11.7308537794379,11.8440702648824,10.5671318284117,11.0925938542838,12.2307924114679,11.7939888189787,14.7104009078799,14.493508015713,14.8287773192159,14.1259095149217,14.2323783596958,10.7858329038507,10.3746263939853,16.1304431336037,7.39704813717019,10.5108631600951,25.9227792048085,15.4775009162439,11.8311017172252,14.9389296366379,16.8209188750524,18.7464887934095,11.6179058602617,12.8333050478673,10.6722945751374,9.84386123724955,7.86235980452812,7.87017393346988,10.3458661908136,9.88826354984909,6.87489799809833,10.64475708568,11.5116011010275,5.76578967694971,8.62609239164127,10.7920874823866,12.4815069245824,11.6186283855671,15.7869723899283,12.5435315554475,28.2672380954905,9.09558776498327,9.94086356296358,11.712410918488,13.6120344007331,15.410575684647,15.2347930167049,21.6598349122157,22.2265553189729,24.8040452406628,17.3805697836661,17.8611013040154,16.9231282228578,23.1438493730419,12.0633027151418,11.4220193601929,31.9646777462374,19.0396354950265,23.2798355482298,19.8087750340823,7.86887737808042,8.07906967053994,13.2513452154828,12.4940398174924,11.6328634775711,10.5146271099123,10.0259403337077,12.4553673547086,8.90583543684768,11.1057226006299,12.6492088942888,40.8078071855695,15.329529202493,9.61554259803178,15.1484872198826,14.1874305756381,2.65490276679926,7.52619972080442,9.37203026590728,8.86443874852721,10.6308681437078,9.53048958626175,11.8877014857382,14.5413491791002,8.19943970284859,11.6933600436252,15.8127912862498,16.5016869197099,18.0432991049508,11.1637878299412,6.72665155670323,10.2881776815164,15.2512600932355,11.5939731441346,9.87294123612726,7.30715877875038,15.4883327322049,22.0305353698373,13.4522322813527,36.2749756471256,25.8343082713449,18.5160679529438,18.0252239444736,18.0554989719567,11.9507143018239,26.8866687915239,16.0618627949982,10.9385040020508,12.4080333337707,11.8672127912955,15.0363650493128,10.7525741407066,7.47905091972963,7.97723278244851,9.25939824489639,7.63736494412091,10.4390877881775,12.40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| |||
|short_description=p2@Secisbp2l | |||
}} |
Revision as of 21:56, 13 September 2013
Short description: | p2@Secisbp2l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Secisbp2l_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 67bp_to_ENSMUST00000053699, ENSMUST00000167822, NM_177608, uc008mcz.1_5end |
EntrezGene: | Secisbp2l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.29e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.29e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 7.56e-15 | 73 |
ectoderm-derived structure | 3.41e-13 | 95 |
ectoderm | 3.41e-13 | 95 |
presumptive ectoderm | 3.41e-13 | 95 |
gray matter | 5.45e-13 | 34 |
neurectoderm | 2.04e-12 | 64 |
neural plate | 2.04e-12 | 64 |
presumptive neural plate | 2.04e-12 | 64 |
regional part of nervous system | 2.58e-12 | 54 |
neural tube | 1.02e-11 | 52 |
neural rod | 1.02e-11 | 52 |
future spinal cord | 1.02e-11 | 52 |
neural keel | 1.02e-11 | 52 |
brain grey matter | 2.59e-11 | 29 |
regional part of telencephalon | 2.59e-11 | 29 |
telencephalon | 2.59e-11 | 29 |
pre-chordal neural plate | 1.89e-10 | 49 |
brain | 3.76e-10 | 47 |
future brain | 3.76e-10 | 47 |
regional part of brain | 1.34e-09 | 46 |
anterior neural tube | 2.91e-09 | 40 |
central nervous system | 5.87e-09 | 73 |
nervous system | 7.38e-09 | 75 |
regional part of forebrain | 9.04e-09 | 39 |
forebrain | 9.04e-09 | 39 |
future forebrain | 9.04e-09 | 39 |
cerebral cortex | 2.63e-08 | 21 |
cerebral hemisphere | 2.63e-08 | 21 |
pallium | 2.63e-08 | 21 |
adult organism | 4.13e-07 | 51 |
occipital lobe | 5.64e-07 | 10 |
visual cortex | 5.64e-07 | 10 |
neocortex | 5.64e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.