FFCP PHASE1:Hg19::chr6:79315735..79315760,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_ENST00000449463_5end|coexpression_cluster_id=C328|description=CAGE_peak_1_at_ENST00000449463_5end|id=chr6:79315735..79315760,-|ontology_enrichment_celltype=CL:0002139!1.80e-27!24;CL:0000071!1.89e-20!18;CL:0002546!1.89e-20!18;CL:0000115!2.73e-17!35;CL:0002620!2.96e-16!23;CL:0002078!1.46e-15!44;CL:0000213!2.27e-15!57;CL:0000215!2.27e-15!57;CL:0000222!3.63e-14!119;CL:0000057!3.05e-13!75;CL:0000076!1.80e-12!62;CL:0000220!4.57e-12!246;CL:0002321!8.84e-12!248;CL:0000055!2.45e-11!180;CL:1000413!1.20e-10!9;CL:0005020!1.40e-08!6;CL:0002138!1.40e-08!6;CL:0005022!1.40e-08!6;CL:0002543!1.42e-08!6;CL:0002371!2.98e-08!591;CL:0000144!3.25e-08!625;CL:0002544!5.48e-08!6;CL:0000548!1.05e-07!679;CL:0000004!1.05e-07!679;CL:0000255!1.05e-07!679;CL:0000012!1.79e-07!682|ontology_enrichment_celltype_v019=CL:0002139;1.52e-46;24!CL:0000071;5.07e-30;18!CL:0000115;2.69e-25;36!CL:0002138;8.01e-19;6!CL:0002543;1.52e-18;6!CL:1000413;2.86e-15;9!CL:0002078;4.79e-15;45!CL:0000213;1.22e-14;58!CL:0000215;1.22e-14;58!CL:0002544;2.08e-12;6!CL:0000076;3.80e-12;63!CL:0002618;1.13e-10;3!CL:0002620;5.96e-09;23|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-46,24;CL:0000071,3.06e-30,18;CL:0002546,3.06e-30,18;CL:0000115,2.72e-29,36;CL:0000213,1.55e-26,58;CL:0000215,1.55e-26,58;CL:0002078,9.34e-25,45;CL:0005020,9.76e-19,6;CL:0002138,9.76e-19,6;CL:0005022,9.76e-19,6;CL:0002543,1.01e-18,6;CL:0000076,1.23e-17,63;CL:1000413,2.08e-15,9;CL:0000222,1.49e-13,121;CL:0002544,1.47e-12,6;CL:0002618,1.10e-10,3;CL:0000066,2.13e-09,253;CL:0002620,3.69e-09,23;CL:0002321,7.80e-08,250|ontology_enrichment_development_v019=CL:0002546;5.07e-30;18!CL:0005022;8.01e-19;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!4.01e-21!79;UBERON:0007798!4.01e-21!79;UBERON:0001986!1.89e-20!18;UBERON:0004638!1.89e-20!18;UBERON:0004852!1.89e-20!18;UBERON:0000055!2.20e-16!69;UBERON:0000487!1.64e-15!22;UBERON:0006914!3.00e-14!25;UBERON:0004535!3.89e-14!110;UBERON:0001009!2.43e-13!113;UBERON:0001981!7.95e-13!60;UBERON:0007500!7.95e-13!60;UBERON:0004537!7.95e-13!60;UBERON:0006965!7.95e-13!60;UBERON:0002097!1.38e-11!40;UBERON:0003915!1.20e-10!9;UBERON:0004700!1.20e-10!9;UBERON:0001917!1.20e-10!9;UBERON:0002199!2.32e-10!45;UBERON:0002416!2.32e-10!45;UBERON:0004872!3.46e-09!84;UBERON:0003102!8.04e-09!95;UBERON:0001637!4.15e-07!42;UBERON:0003509!4.15e-07!42;UBERON:0004572!4.15e-07!42|ontology_enrichment_uberon_v019=UBERON:0004638;5.07e-30;18!UBERON:0001986;5.07e-30;18!UBERON:0004852;5.07e-30;18!UBERON:0000487;6.41e-24;22!UBERON:0006914;1.25e-20;25!UBERON:0003915;2.86e-15;9!UBERON:0004700;2.86e-15;9!UBERON:0001917;2.86e-15;9!UBERON:0000490;3.25e-15;33!UBERON:0001473;6.31e-14;8!UBERON:0004536;6.31e-14;8!UBERON:0006558;6.31e-14;8!UBERON:0001638;4.11e-12;9!UBERON:0003920;4.11e-12;9!UBERON:0004582;4.11e-12;9!UBERON:0002465;5.50e-11;10!UBERON:0000055;1.08e-09;65!UBERON:0002049;4.76e-09;75!UBERON:0007798;4.76e-09;75!UBERON:0007500;5.35e-07;56!UBERON:0001981;5.35e-07;56!UBERON:0004537;5.35e-07;56|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.06e-30,18;UBERON:0001986,3.06e-30,18;UBERON:0004852,3.06e-30,18;UBERON:0000487,4.27e-24,22;UBERON:0006914,8.79e-21,25;UBERON:0002049,5.69e-18,78;UBERON:0007798,5.69e-18,78;UBERON:0003915,2.08e-15,9;UBERON:0004700,2.08e-15,9;UBERON:0001917,2.08e-15,9;UBERON:0000055,1.51e-14,68;UBERON:0001473,7.29e-14,8;UBERON:0004536,7.29e-14,8;UBERON:0006558,7.29e-14,8;UBERON:0001638,3.14e-12,9;UBERON:0003920,3.14e-12,9;UBERON:0004582,3.14e-12,9;UBERON:0004535,4.83e-11,109;UBERON:0002465,6.16e-11,10;UBERON:0001009,1.40e-10,112;UBERON:0007500,4.48e-08,59;UBERON:0001981,4.48e-08,59;UBERON:0004537,4.48e-08,59;UBERON:0006965,4.48e-08,59|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,3.1042115644759,1.58102614247627,0,0,0,0,0,0,0,0,0,4.77029777680092,0.860234595106124,1.73570250803797,2.26123176769604,0.419499436209906,1.10047216776027,1.67195973229448,21.965424529393,21.3459757612026,13.0541038978221,2.01414658554573,0.760272105718513,0.976248230192678,1.10298924103761,1.62028389576352,15.627452449714,3.14341121676638,3.26573293401634,1.53316637465883,3.79706263827252,1.46561395144326,0,0,0,0.993943903390637,1.64619665163954,0.662045904066094,0.860509862246441,0,0,0,0.49333509683432,0,0.404132016209064,0,0.151357427644931,0,0.937285727335186,0,1.1409436430889,0,0.117434498643765,0.809364721840658,0.702254033511242,0.61246251376468,1.10550885580591,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000449463_5end | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_1_at_ENST00000449463_5end | |||
|id=chr6:79315735..79315760,- | |||
|ontology_enrichment_celltype=CL:0002139!1.80e-27!24;CL:0000071!1.89e-20!18;CL:0002546!1.89e-20!18;CL:0000115!2.73e-17!35;CL:0002620!2.96e-16!23;CL:0002078!1.46e-15!44;CL:0000213!2.27e-15!57;CL:0000215!2.27e-15!57;CL:0000222!3.63e-14!119;CL:0000057!3.05e-13!75;CL:0000076!1.80e-12!62;CL:0000220!4.57e-12!246;CL:0002321!8.84e-12!248;CL:0000055!2.45e-11!180;CL:1000413!1.20e-10!9;CL:0005020!1.40e-08!6;CL:0002138!1.40e-08!6;CL:0005022!1.40e-08!6;CL:0002543!1.42e-08!6;CL:0002371!2.98e-08!591;CL:0000144!3.25e-08!625;CL:0002544!5.48e-08!6;CL:0000548!1.05e-07!679;CL:0000004!1.05e-07!679;CL:0000255!1.05e-07!679;CL:0000012!1.79e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.52e-46;24!CL:0000071;5.07e-30;18!CL:0000115;2.69e-25;36!CL:0002138;8.01e-19;6!CL:0002543;1.52e-18;6!CL:1000413;2.86e-15;9!CL:0002078;4.79e-15;45!CL:0000213;1.22e-14;58!CL:0000215;1.22e-14;58!CL:0002544;2.08e-12;6!CL:0000076;3.80e-12;63!CL:0002618;1.13e-10;3!CL:0002620;5.96e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-46,24;CL:0000071,3.06e-30,18;CL:0002546,3.06e-30,18;CL:0000115,2.72e-29,36;CL:0000213,1.55e-26,58;CL:0000215,1.55e-26,58;CL:0002078,9.34e-25,45;CL:0005020,9.76e-19,6;CL:0002138,9.76e-19,6;CL:0005022,9.76e-19,6;CL:0002543,1.01e-18,6;CL:0000076,1.23e-17,63;CL:1000413,2.08e-15,9;CL:0000222,1.49e-13,121;CL:0002544,1.47e-12,6;CL:0002618,1.10e-10,3;CL:0000066,2.13e-09,253;CL:0002620,3.69e-09,23;CL:0002321,7.80e-08,250 | |||
|ontology_enrichment_development_v019=CL:0002546;5.07e-30;18!CL:0005022;8.01e-19;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.01e-21!79;UBERON:0007798!4.01e-21!79;UBERON:0001986!1.89e-20!18;UBERON:0004638!1.89e-20!18;UBERON:0004852!1.89e-20!18;UBERON:0000055!2.20e-16!69;UBERON:0000487!1.64e-15!22;UBERON:0006914!3.00e-14!25;UBERON:0004535!3.89e-14!110;UBERON:0001009!2.43e-13!113;UBERON:0001981!7.95e-13!60;UBERON:0007500!7.95e-13!60;UBERON:0004537!7.95e-13!60;UBERON:0006965!7.95e-13!60;UBERON:0002097!1.38e-11!40;UBERON:0003915!1.20e-10!9;UBERON:0004700!1.20e-10!9;UBERON:0001917!1.20e-10!9;UBERON:0002199!2.32e-10!45;UBERON:0002416!2.32e-10!45;UBERON:0004872!3.46e-09!84;UBERON:0003102!8.04e-09!95;UBERON:0001637!4.15e-07!42;UBERON:0003509!4.15e-07!42;UBERON:0004572!4.15e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.07e-30;18!UBERON:0001986;5.07e-30;18!UBERON:0004852;5.07e-30;18!UBERON:0000487;6.41e-24;22!UBERON:0006914;1.25e-20;25!UBERON:0003915;2.86e-15;9!UBERON:0004700;2.86e-15;9!UBERON:0001917;2.86e-15;9!UBERON:0000490;3.25e-15;33!UBERON:0001473;6.31e-14;8!UBERON:0004536;6.31e-14;8!UBERON:0006558;6.31e-14;8!UBERON:0001638;4.11e-12;9!UBERON:0003920;4.11e-12;9!UBERON:0004582;4.11e-12;9!UBERON:0002465;5.50e-11;10!UBERON:0000055;1.08e-09;65!UBERON:0002049;4.76e-09;75!UBERON:0007798;4.76e-09;75!UBERON:0007500;5.35e-07;56!UBERON:0001981;5.35e-07;56!UBERON:0004537;5.35e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.06e-30,18;UBERON:0001986,3.06e-30,18;UBERON:0004852,3.06e-30,18;UBERON:0000487,4.27e-24,22;UBERON:0006914,8.79e-21,25;UBERON:0002049,5.69e-18,78;UBERON:0007798,5.69e-18,78;UBERON:0003915,2.08e-15,9;UBERON:0004700,2.08e-15,9;UBERON:0001917,2.08e-15,9;UBERON:0000055,1.51e-14,68;UBERON:0001473,7.29e-14,8;UBERON:0004536,7.29e-14,8;UBERON:0006558,7.29e-14,8;UBERON:0001638,3.14e-12,9;UBERON:0003920,3.14e-12,9;UBERON:0004582,3.14e-12,9;UBERON:0004535,4.83e-11,109;UBERON:0002465,6.16e-11,10;UBERON:0001009,1.40e-10,112;UBERON:0007500,4.48e-08,59;UBERON:0001981,4.48e-08,59;UBERON:0004537,4.48e-08,59;UBERON:0006965,4.48e-08,59 | |||
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|short_description=p1@ENST00000449463 | |||
}} |
Revision as of 21:55, 13 September 2013
Short description: | p1@ENST00000449463 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000449463_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 0bp_to_ENST00000449463_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.03e-46 | 24 |
blood vessel endothelial cell | 3.06e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.06e-30 | 18 |
endothelial cell | 2.72e-29 | 36 |
lining cell | 1.55e-26 | 58 |
barrier cell | 1.55e-26 | 58 |
meso-epithelial cell | 9.34e-25 | 45 |
lymphangioblast | 9.76e-19 | 6 |
endothelial cell of lymphatic vessel | 9.76e-19 | 6 |
vascular lymphangioblast | 9.76e-19 | 6 |
vein endothelial cell | 1.01e-18 | 6 |
squamous epithelial cell | 1.23e-17 | 63 |
endothelial cell of artery | 2.08e-15 | 9 |
mesodermal cell | 1.49e-13 | 121 |
aortic endothelial cell | 1.47e-12 | 6 |
endothelial cell of umbilical vein | 1.10e-10 | 3 |
epithelial cell | 2.13e-09 | 253 |
skin fibroblast | 3.69e-09 | 23 |
embryonic cell | 7.80e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.06e-30 | 18 |
endothelium | 3.06e-30 | 18 |
cardiovascular system endothelium | 3.06e-30 | 18 |
simple squamous epithelium | 4.27e-24 | 22 |
squamous epithelium | 8.79e-21 | 25 |
vasculature | 5.69e-18 | 78 |
vascular system | 5.69e-18 | 78 |
endothelial tube | 2.08e-15 | 9 |
arterial system endothelium | 2.08e-15 | 9 |
endothelium of artery | 2.08e-15 | 9 |
vessel | 1.51e-14 | 68 |
lymphatic vessel | 7.29e-14 | 8 |
lymph vasculature | 7.29e-14 | 8 |
lymphatic part of lymphoid system | 7.29e-14 | 8 |
vein | 3.14e-12 | 9 |
venous blood vessel | 3.14e-12 | 9 |
venous system | 3.14e-12 | 9 |
cardiovascular system | 4.83e-11 | 109 |
lymphoid system | 6.16e-11 | 10 |
circulatory system | 1.40e-10 | 112 |
epithelial tube open at both ends | 4.48e-08 | 59 |
blood vessel | 4.48e-08 | 59 |
blood vasculature | 4.48e-08 | 59 |
vascular cord | 4.48e-08 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.