FFCP PHASE1:Hg19::chr6:7389625..7389642,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=285782|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21622|TSSclassifier=S|UniProt=E7EUJ7,D6R9A7,D6RCC6|association_with_transcript=0bp_to_ENST00000338150,ENST00000379918,ENST00000442019,ENST00000509324,ENST00000512086,ENST00000512691_5end|coexpression_cluster_id=C8|description=CAGE_peak_2_at_CAGE1_5end|id=chr6:7389625..7389642,-|ontology_enrichment_celltype=CL:0000738!2.57e-28!140;CL:0000037!1.30e-23!172;CL:0000566!1.30e-23!172;CL:0000988!1.73e-22!182;CL:0002032!2.39e-18!165;CL:0000837!2.39e-18!165;CL:0000838!1.63e-17!52;CL:0002031!3.55e-17!124;CL:0002087!4.18e-17!119;CL:0000542!4.75e-17!53;CL:0000051!4.75e-17!53;CL:0000624!3.40e-13!6;CL:0000791!1.24e-10!18;CL:0000789!1.24e-10!18;CL:0002420!1.24e-10!18;CL:0002419!1.24e-10!18;CL:0000790!1.24e-10!18;CL:0000094!7.52e-10!8;CL:0000084!2.42e-08!25;CL:0000827!2.42e-08!25;CL:0000623!3.65e-08!3;CL:0000825!3.65e-08!3;CL:0000784!1.06e-07!3;CL:0000766!1.64e-07!76;CL:0000767!1.66e-07!3;CL:0000081!6.67e-07!11;CL:0000898!7.01e-07!3;CL:0000236!8.78e-07!14|ontology_enrichment_celltype_v019=CL:0000094;3.67e-21;8!CL:0000623;1.99e-16;3!CL:0000784;1.86e-15;3!CL:0000081;3.08e-15;11!CL:0000767;5.83e-15;3!CL:0000624;1.54e-13;6!CL:0000791;9.38e-13;18!CL:0000789;9.38e-13;18!CL:0002419;9.38e-13;18!CL:0000542;3.41e-11;53!CL:0000771;9.17e-11;2!CL:0000236;4.84e-09;13!CL:0000084;6.55e-09;25!CL:0000097;8.40e-09;5!CL:0002393;6.57e-08;6!CL:0002397;6.57e-08;6!CL:0000226;4.98e-07;3!CL:0000842;4.98e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,1.78e-29,136;CL:0000037,4.37e-26,168;CL:0000988,2.10e-24,177;CL:0000094,3.75e-21,8;CL:0002032,8.23e-19,161;CL:0000837,8.23e-19,161;CL:0000838,3.48e-18,52;CL:0000542,8.88e-18,53;CL:0000051,8.88e-18,53;CL:0000623,1.99e-16,3;CL:0000825,1.99e-16,3;CL:0000784,2.16e-15,3;CL:0000081,3.12e-15,11;CL:0000767,5.98e-15,3;CL:0002031,1.76e-14,120;CL:0002087,8.23e-14,115;CL:0000624,1.34e-13,6;CL:0000791,8.50e-13,18;CL:0000789,8.50e-13,18;CL:0002420,8.50e-13,18;CL:0002419,8.50e-13,18;CL:0000790,8.50e-13,18;CL:0000771,7.73e-11,2;CL:0000084,6.12e-09,25;CL:0000827,6.12e-09,25;CL:0000097,1.14e-08,5;CL:0002028,1.14e-08,5;CL:0000134,1.22e-08,354;CL:0000236,2.12e-08,14;CL:0002320,2.47e-08,361;CL:0000766,2.80e-08,72;CL:0000219,2.94e-07,386;CL:0000226,6.20e-07,3;CL:0000842,6.20e-07,3;CL:0000034,8.55e-07,441|ontology_enrichment_development_v019=CL:0000790;9.38e-13;18!CL:0000051;3.41e-11;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.44e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.157421562627358,3.14691421479123,2.30297638858328,1.70297735647684,0,0,0,0,0,2.64240395401362,3.87796785972314,2.80762226458198,3.68918480216948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0.850417199860174,0,0.44931452458598,0.600707571366025,0.803627933485401,0,0,0,1.75996244461323,0,0,2.13365111283254,0.400395987036012,0,0.661044872784862,0,5.12291672198504,1.76171156811282,3.44045905312706,1.32171328579026,2.24203425192614,0,7.08155172409799,5.10913991573914,5.75684197198626,0.83593247695339,0.651844533267181,0.946895611469467,1.94826728407911,0.779873198196215,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0.910415432919148,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,1.91610246800961,1.03088233644789,1.51811815211702,0,0,0,0.903450714466637,0,0,0,0,6.8546292696409,3.7441627409691,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0,2.14641561874808,4.57595928624102,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.44119953416961,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5802762549426,8.84073056924021,8.85566950330264,0,0,0,0,0,0,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=285782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21622 | |||
|TSSclassifier=S | |||
|UniProt=E7EUJ7,D6R9A7,D6RCC6 | |||
|association_with_transcript=0bp_to_ENST00000338150,ENST00000379918,ENST00000442019,ENST00000509324,ENST00000512086,ENST00000512691_5end | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_2_at_CAGE1_5end | |||
|id=chr6:7389625..7389642,- | |||
|ontology_enrichment_celltype=CL:0000738!2.57e-28!140;CL:0000037!1.30e-23!172;CL:0000566!1.30e-23!172;CL:0000988!1.73e-22!182;CL:0002032!2.39e-18!165;CL:0000837!2.39e-18!165;CL:0000838!1.63e-17!52;CL:0002031!3.55e-17!124;CL:0002087!4.18e-17!119;CL:0000542!4.75e-17!53;CL:0000051!4.75e-17!53;CL:0000624!3.40e-13!6;CL:0000791!1.24e-10!18;CL:0000789!1.24e-10!18;CL:0002420!1.24e-10!18;CL:0002419!1.24e-10!18;CL:0000790!1.24e-10!18;CL:0000094!7.52e-10!8;CL:0000084!2.42e-08!25;CL:0000827!2.42e-08!25;CL:0000623!3.65e-08!3;CL:0000825!3.65e-08!3;CL:0000784!1.06e-07!3;CL:0000766!1.64e-07!76;CL:0000767!1.66e-07!3;CL:0000081!6.67e-07!11;CL:0000898!7.01e-07!3;CL:0000236!8.78e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.67e-21;8!CL:0000623;1.99e-16;3!CL:0000784;1.86e-15;3!CL:0000081;3.08e-15;11!CL:0000767;5.83e-15;3!CL:0000624;1.54e-13;6!CL:0000791;9.38e-13;18!CL:0000789;9.38e-13;18!CL:0002419;9.38e-13;18!CL:0000542;3.41e-11;53!CL:0000771;9.17e-11;2!CL:0000236;4.84e-09;13!CL:0000084;6.55e-09;25!CL:0000097;8.40e-09;5!CL:0002393;6.57e-08;6!CL:0002397;6.57e-08;6!CL:0000226;4.98e-07;3!CL:0000842;4.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.78e-29,136;CL:0000037,4.37e-26,168;CL:0000988,2.10e-24,177;CL:0000094,3.75e-21,8;CL:0002032,8.23e-19,161;CL:0000837,8.23e-19,161;CL:0000838,3.48e-18,52;CL:0000542,8.88e-18,53;CL:0000051,8.88e-18,53;CL:0000623,1.99e-16,3;CL:0000825,1.99e-16,3;CL:0000784,2.16e-15,3;CL:0000081,3.12e-15,11;CL:0000767,5.98e-15,3;CL:0002031,1.76e-14,120;CL:0002087,8.23e-14,115;CL:0000624,1.34e-13,6;CL:0000791,8.50e-13,18;CL:0000789,8.50e-13,18;CL:0002420,8.50e-13,18;CL:0002419,8.50e-13,18;CL:0000790,8.50e-13,18;CL:0000771,7.73e-11,2;CL:0000084,6.12e-09,25;CL:0000827,6.12e-09,25;CL:0000097,1.14e-08,5;CL:0002028,1.14e-08,5;CL:0000134,1.22e-08,354;CL:0000236,2.12e-08,14;CL:0002320,2.47e-08,361;CL:0000766,2.80e-08,72;CL:0000219,2.94e-07,386;CL:0000226,6.20e-07,3;CL:0000842,6.20e-07,3;CL:0000034,8.55e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;9.38e-13;18!CL:0000051;3.41e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.44e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.157421562627358,3.14691421479123,2.30297638858328,1.70297735647684,0,0,0,0,0,2.64240395401362,3.87796785972314,2.80762226458198,3.68918480216948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0.850417199860174,0,0.44931452458598,0.600707571366025,0.803627933485401,0,0,0,1.75996244461323,0,0,2.13365111283254,0.400395987036012,0,0.661044872784862,0,5.12291672198504,1.76171156811282,3.44045905312706,1.32171328579026,2.24203425192614,0,7.08155172409799,5.10913991573914,5.75684197198626,0.83593247695339,0.651844533267181,0.946895611469467,1.94826728407911,0.779873198196215,0.294605907474837,0.443067789167242,0.270803863765016,0.384273959177026,0.910415432919148,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,1.91610246800961,1.03088233644789,1.51811815211702,0,0,0,0.903450714466637,0,0,0,0,6.8546292696409,3.7441627409691,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0,2.14641561874808,4.57595928624102,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.44119953416961,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5802762549426,8.84073056924021,8.85566950330264,0,0,0,0,0,0,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.2942852049117,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,7.42631242538746,6.16317499359211,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CAGE1 | |||
}} |
Revision as of 21:46, 13 September 2013
Short description: | p2@CAGE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CAGE1_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 0bp_to_ENST00000338150, ENST00000379918, ENST00000442019, ENST00000509324, ENST00000512086, ENST00000512691_5end |
EntrezGene: | CAGE1 |
HGNC: | 21622 |
UniProt: | E7EUJ7D6R9A7D6RCC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.44e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.