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FFCP PHASE1:Mm9::chr2:109757880..109757893,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=107515|HGNC=|UniProt=A2ARI4,A2ARI3,Q8BZR7|association_with_transcript=76bp_to_ENSMUST00000046548,ENSMUST00000111037,NM_172671,uc008lmq.1_5end|description=CAGE_peak_4_at_Lgr4_5end|id=chr2:109757880..109757893,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!2.26e-08!43;UBERON:0007100!1.22e-07!18;UBERON:0000948!1.22e-07!18;UBERON:0005498!1.22e-07!18;UBERON:0004140!1.22e-07!18;UBERON:0009881!1.22e-07!18;UBERON:0004141!1.22e-07!18;UBERON:0003084!1.22e-07!18;UBERON:0007005!1.22e-07!18;UBERON:0004139!1.22e-07!18;UBERON:0004291!1.22e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.75e-12,18;UBERON:0000948,4.75e-12,18;UBERON:0005498,4.75e-12,18;UBERON:0004140,4.75e-12,18;UBERON:0009881,4.75e-12,18;UBERON:0004141,4.75e-12,18;UBERON:0003084,4.75e-12,18;UBERON:0007005,4.75e-12,18;UBERON:0004139,4.75e-12,18;UBERON:0004291,4.75e-12,18;UBERON:0003103,5.96e-09,43;UBERON:0004535,1.51e-08,23;UBERON:0001009,1.51e-08,23;UBERON:0004872,9.59e-08,33|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,2.11724947914781,0.500895729946347,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0,0.635030673459631,0,0,0.866554859253824,0.997407872150954,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,0,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0.52091337055676,0.558365998002762,0,0.30559649555362,0.883885756421003,0.854230084794618,0.745597783301202,0.37863096666592,0.151143120213571,0.289864488701678,0,0.679971333707751,0.539703191637817,0.649776417447669,2.24013443548668,0.421333260395256,0.340860645156116,0.519572009205738,1.41335829804136,1.26759077799012,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,0.445326417194474,0.693941307064543,0.608930956624282,0.922461989024234,0,1.52865319276416,0.753999547978053,2.71914464507811,0.722996784599558,0.884610551949874,1.13236794963186,1.32504911076236,0.484875253135222,1.86391761218122,1.17112318804619,1.25668024088073,1.02182822083437,0,0,0,0.599162557619291,0.457500602818626,0,0.347648640384553,0,0.62336413367868,0.648965052271031,1.42575109390443,0.497627882440372,0.252722758433675,0.420883711772948,0.390361328888111,0.689706313300419,0,0.452114453507145,1.29269348387523,0.768682321709099,1.03071897015702,0.776110112217047,0.215567992932842,0.189106080167819,0.879755620819744,0.657587197282725,0.556094498451196,0.348252166522167,0.411564272815887,0.995171334092466,0,0,0,1.44988040774851,1.17263029990548,0.900310307305074,1.89395788468168,1.18058539048442,1.85120535464854,2.55787339225449,1.87791380979733,3.38619492864792,1.81015834904829,2.95501435342371,2.91847714365081,4.23979963533464,1.75640092232841,3.48936688776967,0,0.205809224758569,0.330418782983798,1.58670339998127,0,0.928946687441754,0.644337306610467,0.605050573870028,0.889512175379481,0.570676878337677,1.89811624617805,1.15289268306808,1.25667604400135,0.994782360205754,2.53453313254856,0,0.648414149624083,1.99141273254367,0.758671603812327,0.685491075658373,0,1.01825663922657,0.193952487167626,1.8936671370386,1.13825766823663,2.06654207171443,0.941992367048249,1.60416313098341,0.889357881261447,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,1.01850340712568,1.43848068725405,0.810676133875177,0,4.31304619582064,0,0.624075346229121,0.505157755894224,0.179397413521912,2.8946611281802,0,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.952174563544055,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0.433947175744535,0,0,2.45882136509518,3.03530420935206,0.160550589987792,0.117211686592203,0.327869890753351,1.76729649043061,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.651547837414304,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,1.55056975900933,0,0.356497378384721,1.8962205476149,1.05418608574999,2.06271086496374,0,0.36012218806262,0.776152102696527,0.428674070063185,0.709360934569094,0.356737635204141,0.164549020602121,0.913394847343798,2.11204537257339,1.90648863777438,1.10264199027481,0.8244312647074,1.45317984026315,1.32688434841943,0.477489376012546,1.64140899745061,0.582961673259701,0.370850604021019,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,1.90934123603023,0.790839983952838,0.609958401380546,0.324016022465404,0.627264888043406,2.40198820120795,2.15782954215713,1.98368293740806,1.30877970992015,2.20345454596048,0.621339313086926,0,1.34564891439581,0.496375471371293,0.777804753376191,0.645799117388655,0.337912250981556,0.938857909166032,0.781226309063701,0.734015410979976,0,0.288030006257865,0,0.608175645870493,0.616265742988964,0.25984164595559,0,0.198681354781265,0,0.147689527174577,0,0.15241361331,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,0.906921534460845,0.665957860122194,0.358855426437903,0.503653849092235,7.72758376128762,1.12609485270709,0.183151624267265,0.214368379079066,1.00314420807073,0.564751842617067,0,1.14579102687879,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.824140228955577,0.962757628775446,1.01078884705519,1.01391719956096,0.943131706930381,0.561849044819294,0.832326981263301,0.574354689556133,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.883193520806384,0.342869252385415,0.177475806159338,1.66905332963125,0.581385666529314,0.846984423737976,0.592302255241736,0.73171189149109,0.526139422875686,0.679020569229309,1.68342681497322,1.77952527186261,0.886540341380071,0.818462086339379,0.619747364743864,0.385813221962283,0,0.701794825336225,1.07435527024149,1.91288332068843,0.661774257358546,0.695603506861264|short_description=p4@Lgr4}}
|EntrezGene=107515
|HGNC=
|UniProt=A2ARI4,A2ARI3,Q8BZR7
|association_with_transcript=76bp_to_ENSMUST00000046548,ENSMUST00000111037,NM_172671,uc008lmq.1_5end
|description=CAGE_peak_4_at_Lgr4_5end
|id=chr2:109757880..109757893,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003103!2.26e-08!43;UBERON:0007100!1.22e-07!18;UBERON:0000948!1.22e-07!18;UBERON:0005498!1.22e-07!18;UBERON:0004140!1.22e-07!18;UBERON:0009881!1.22e-07!18;UBERON:0004141!1.22e-07!18;UBERON:0003084!1.22e-07!18;UBERON:0007005!1.22e-07!18;UBERON:0004139!1.22e-07!18;UBERON:0004291!1.22e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.75e-12,18;UBERON:0000948,4.75e-12,18;UBERON:0005498,4.75e-12,18;UBERON:0004140,4.75e-12,18;UBERON:0009881,4.75e-12,18;UBERON:0004141,4.75e-12,18;UBERON:0003084,4.75e-12,18;UBERON:0007005,4.75e-12,18;UBERON:0004139,4.75e-12,18;UBERON:0004291,4.75e-12,18;UBERON:0003103,5.96e-09,43;UBERON:0004535,1.51e-08,23;UBERON:0001009,1.51e-08,23;UBERON:0004872,9.59e-08,33
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,2.11724947914781,0.500895729946347,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0,0.635030673459631,0,0,0.866554859253824,0.997407872150954,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0,0.367093504323363,0,0,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,0,0.182975287204819,0.52091337055676,0.558365998002762,0,0.30559649555362,0.883885756421003,0.854230084794618,0.745597783301202,0.37863096666592,0.151143120213571,0.289864488701678,0,0.679971333707751,0.539703191637817,0.649776417447669,2.24013443548668,0.421333260395256,0.340860645156116,0.519572009205738,1.41335829804136,1.26759077799012,1.28326477414318,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,0.445326417194474,0.693941307064543,0.608930956624282,0.922461989024234,0,1.52865319276416,0.753999547978053,2.71914464507811,0.722996784599558,0.884610551949874,1.13236794963186,1.32504911076236,0.484875253135222,1.86391761218122,1.17112318804619,1.25668024088073,1.02182822083437,0,0,0,0.599162557619291,0.457500602818626,0,0.347648640384553,0,0.62336413367868,0.648965052271031,1.42575109390443,0.497627882440372,0.252722758433675,0.420883711772948,0.390361328888111,0.689706313300419,0,0.452114453507145,1.29269348387523,0.768682321709099,1.03071897015702,0.776110112217047,0.215567992932842,0.189106080167819,0.879755620819744,0.657587197282725,0.556094498451196,0.348252166522167,0.411564272815887,0.995171334092466,0,0,0,1.44988040774851,1.17263029990548,0.900310307305074,1.89395788468168,1.18058539048442,1.85120535464854,2.55787339225449,1.87791380979733,3.38619492864792,1.81015834904829,2.95501435342371,2.91847714365081,4.23979963533464,1.75640092232841,3.48936688776967,0,0.205809224758569,0.330418782983798,1.58670339998127,0,0.928946687441754,0.644337306610467,0.605050573870028,0.889512175379481,0.570676878337677,1.89811624617805,1.15289268306808,1.25667604400135,0.994782360205754,2.53453313254856,0,0.648414149624083,1.99141273254367,0.758671603812327,0.685491075658373,0,1.01825663922657,0.193952487167626,1.8936671370386,1.13825766823663,2.06654207171443,0.941992367048249,1.60416313098341,0.889357881261447,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,0.241177159752417,1.01850340712568,1.43848068725405,0.810676133875177,0,4.31304619582064,0,0.624075346229121,0.505157755894224,0.179397413521912,2.8946611281802,0,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0.952174563544055,0.390267295715598,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0.433947175744535,0,0,2.45882136509518,3.03530420935206,0.160550589987792,0.117211686592203,0.327869890753351,1.76729649043061,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.651547837414304,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,1.55056975900933,0,0.356497378384721,1.8962205476149,1.05418608574999,2.06271086496374,0,0.36012218806262,0.776152102696527,0.428674070063185,0.709360934569094,0.356737635204141,0.164549020602121,0.913394847343798,2.11204537257339,1.90648863777438,1.10264199027481,0.8244312647074,1.45317984026315,1.32688434841943,0.477489376012546,1.64140899745061,0.582961673259701,0.370850604021019,0,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,1.90934123603023,0.790839983952838,0.609958401380546,0.324016022465404,0.627264888043406,2.40198820120795,2.15782954215713,1.98368293740806,1.30877970992015,2.20345454596048,0.621339313086926,0,1.34564891439581,0.496375471371293,0.777804753376191,0.645799117388655,0.337912250981556,0.938857909166032,0.781226309063701,0.734015410979976,0,0.288030006257865,0,0.608175645870493,0.616265742988964,0.25984164595559,0,0.198681354781265,0,0.147689527174577,0,0.15241361331,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,0.906921534460845,0.665957860122194,0.358855426437903,0.503653849092235,7.72758376128762,1.12609485270709,0.183151624267265,0.214368379079066,1.00314420807073,0.564751842617067,0,1.14579102687879,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.824140228955577,0.962757628775446,1.01078884705519,1.01391719956096,0.943131706930381,0.561849044819294,0.832326981263301,0.574354689556133,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.883193520806384,0.342869252385415,0.177475806159338,1.66905332963125,0.581385666529314,0.846984423737976,0.592302255241736,0.73171189149109,0.526139422875686,0.679020569229309,1.68342681497322,1.77952527186261,0.886540341380071,0.818462086339379,0.619747364743864,0.385813221962283,0,0.701794825336225,1.07435527024149,1.91288332068843,0.661774257358546,0.695603506861264
|short_description=p4@Lgr4
}}

Revision as of 21:34, 13 September 2013

Short description:p4@Lgr4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lgr4_5end
Coexpression cluster:NA
Association with transcript: 76bp_to_ENSMUST00000046548, ENSMUST00000111037, NM_172671, uc008lmq.1_5end
EntrezGene:Lgr4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Lgr4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.39
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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