FFCP PHASE1:Hg19::chr6:56819602..56819607,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221336|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20871|TSSclassifier=S|UniProt=Q5SZK0,Q5SZJ8|association_with_transcript=-165bp_to_ENST00000322055,ENST00000370750,NM_152731,uc003pdg.2,uc010kab.2_5end|description=CAGE_peak_5_at_BEND6_5end|id=chr6:56819602..56819607,+|ontology_enrichment_celltype=CL:0000057!4.78e-10!75;CL:0002620!6.60e-09!23|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;1.35e-12;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.78e-12;5!DOID:450;1.78e-12;5!DOID:66;1.78e-12;5!DOID:423;1.78e-12;5!DOID:0080000;1.78e-12;5!DOID:11722;1.78e-12;5|ontology_enrichment_disease_v019_2=DOID:17,5.84e-12,5;DOID:450,5.84e-12,5;DOID:66,5.84e-12,5;DOID:423,5.84e-12,5;DOID:0080000,5.84e-12,5;DOID:11722,5.84e-12,5|ontology_enrichment_uberon=UBERON:0001049!1.09e-24!57;UBERON:0005068!1.09e-24!57;UBERON:0006241!1.09e-24!57;UBERON:0007135!1.09e-24!57;UBERON:0002616!2.67e-22!59;UBERON:0000955!1.42e-21!69;UBERON:0006238!1.42e-21!69;UBERON:0001017!6.05e-21!82;UBERON:0003075!1.66e-20!86;UBERON:0007284!1.66e-20!86;UBERON:0005743!1.64e-19!86;UBERON:0002780!2.45e-19!41;UBERON:0001890!2.45e-19!41;UBERON:0006240!2.45e-19!41;UBERON:0002020!7.55e-19!34;UBERON:0003528!7.55e-19!34;UBERON:0001893!1.61e-18!34;UBERON:0002346!1.62e-18!90;UBERON:0003080!1.64e-18!42;UBERON:0002791!7.88e-18!33;UBERON:0000073!1.78e-17!94;UBERON:0001016!1.78e-17!94;UBERON:0001869!2.58e-17!32;UBERON:0000033!1.98e-15!123;UBERON:0002619!1.69e-14!22;UBERON:0000153!1.84e-14!129;UBERON:0007811!1.84e-14!129;UBERON:0003056!6.18e-14!61;UBERON:0001950!6.38e-13!20;UBERON:0000956!7.37e-13!25;UBERON:0000203!7.37e-13!25;UBERON:0004121!1.51e-10!169;UBERON:0000475!3.28e-10!365;UBERON:0000924!1.00e-09!173;UBERON:0006601!1.00e-09!173;UBERON:0002308!1.22e-07!9;UBERON:0000125!1.22e-07!9;UBERON:0002420!1.40e-07!9;UBERON:0007245!1.40e-07!9;UBERON:0010009!1.40e-07!9;UBERON:0010011!1.40e-07!9;UBERON:0000454!1.40e-07!9;UBERON:0003076!2.27e-07!15;UBERON:0003057!2.27e-07!15;UBERON:0007023!9.24e-07!115|ontology_enrichment_uberon_v019=UBERON:0002619;1.61e-21;22!UBERON:0000956;9.90e-19;25!UBERON:0000203;9.90e-19;25!UBERON:0002791;1.38e-17;32!UBERON:0003528;1.75e-16;34!UBERON:0002020;1.75e-16;34!UBERON:0001950;1.92e-16;20!UBERON:0001869;6.83e-16;32!UBERON:0001893;1.17e-15;34!UBERON:0002780;1.96e-14;41!UBERON:0001890;1.96e-14;41!UBERON:0000073;3.47e-14;53!UBERON:0002616;3.47e-14;53!UBERON:0002021;1.78e-12;5!UBERON:0002680;6.11e-11;9!UBERON:0001895;6.11e-11;9!UBERON:0002702;4.47e-09;2!UBERON:0000955;6.48e-09;68!UBERON:0001017;7.12e-09;75!UBERON:0001954;1.24e-08;2!UBERON:0003022;1.24e-08;2!UBERON:0002421;1.24e-08;2!UBERON:0002600;1.24e-08;2!UBERON:0004733;4.06e-08;12!UBERON:0002028;4.06e-08;12!UBERON:0004732;1.82e-07;13!UBERON:0001872;1.95e-07;5!UBERON:0000349;1.95e-07;5!UBERON:0001016;3.97e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.22e-27,53;UBERON:0002616,5.22e-27,53;UBERON:0001049,2.64e-25,56;UBERON:0005068,2.64e-25,56;UBERON:0006241,2.64e-25,56;UBERON:0007135,2.64e-25,56;UBERON:0002619,1.95e-22,22;UBERON:0003528,7.31e-22,34;UBERON:0002020,7.31e-22,34;UBERON:0002791,2.76e-20,32;UBERON:0002780,3.89e-20,41;UBERON:0001890,3.89e-20,41;UBERON:0003080,3.89e-20,41;UBERON:0006240,3.89e-20,41;UBERON:0000955,1.28e-19,68;UBERON:0006238,1.28e-19,68;UBERON:0000956,1.56e-19,25;UBERON:0000203,1.56e-19,25;UBERON:0003075,3.05e-19,82;UBERON:0007284,3.05e-19,82;UBERON:0001893,6.16e-19,34;UBERON:0002346,4.29e-18,86;UBERON:0001017,1.53e-17,81;UBERON:0001869,2.30e-17,32;UBERON:0001950,2.86e-17,20;UBERON:0001016,2.71e-15,89;UBERON:0003056,3.78e-14,61;UBERON:0010371,5.05e-14,104;UBERON:0002021,3.83e-13,5;UBERON:0007023,1.55e-12,114;UBERON:0002680,5.38e-11,9;UBERON:0001895,5.38e-11,9;UBERON:0010092,5.38e-11,9;UBERON:0010314,5.47e-11,132;UBERON:0004121,9.73e-10,171;UBERON:0000924,9.73e-10,171;UBERON:0006601,9.73e-10,171;UBERON:0002702,2.11e-09,2;UBERON:0001954,1.21e-08,2;UBERON:0003022,1.21e-08,2;UBERON:0002421,1.21e-08,2;UBERON:0002600,1.21e-08,2;UBERON:0004733,3.70e-08,12;UBERON:0002028,3.70e-08,12;UBERON:0007277,3.70e-08,12;UBERON:0000349,1.18e-07,5;UBERON:0001872,1.32e-07,5;UBERON:0004732,1.67e-07,13|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.893922188854576,0.872338524100369,0,1.26343974685366,0,0,0,0,0,0.247532705920093,0.994192127183747,0,0.602694528023977,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,1.44846518960824,0,0.486634870302636,0.189069634328136,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0.2384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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221336 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20871 | |||
|TSSclassifier=S | |||
|UniProt=Q5SZK0,Q5SZJ8 | |||
|association_with_transcript=-165bp_to_ENST00000322055,ENST00000370750,NM_152731,uc003pdg.2,uc010kab.2_5end | |||
|description=CAGE_peak_5_at_BEND6_5end | |||
|id=chr6:56819602..56819607,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.78e-10!75;CL:0002620!6.60e-09!23 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.35e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.78e-12;5!DOID:450;1.78e-12;5!DOID:66;1.78e-12;5!DOID:423;1.78e-12;5!DOID:0080000;1.78e-12;5!DOID:11722;1.78e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.84e-12,5;DOID:450,5.84e-12,5;DOID:66,5.84e-12,5;DOID:423,5.84e-12,5;DOID:0080000,5.84e-12,5;DOID:11722,5.84e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.09e-24!57;UBERON:0005068!1.09e-24!57;UBERON:0006241!1.09e-24!57;UBERON:0007135!1.09e-24!57;UBERON:0002616!2.67e-22!59;UBERON:0000955!1.42e-21!69;UBERON:0006238!1.42e-21!69;UBERON:0001017!6.05e-21!82;UBERON:0003075!1.66e-20!86;UBERON:0007284!1.66e-20!86;UBERON:0005743!1.64e-19!86;UBERON:0002780!2.45e-19!41;UBERON:0001890!2.45e-19!41;UBERON:0006240!2.45e-19!41;UBERON:0002020!7.55e-19!34;UBERON:0003528!7.55e-19!34;UBERON:0001893!1.61e-18!34;UBERON:0002346!1.62e-18!90;UBERON:0003080!1.64e-18!42;UBERON:0002791!7.88e-18!33;UBERON:0000073!1.78e-17!94;UBERON:0001016!1.78e-17!94;UBERON:0001869!2.58e-17!32;UBERON:0000033!1.98e-15!123;UBERON:0002619!1.69e-14!22;UBERON:0000153!1.84e-14!129;UBERON:0007811!1.84e-14!129;UBERON:0003056!6.18e-14!61;UBERON:0001950!6.38e-13!20;UBERON:0000956!7.37e-13!25;UBERON:0000203!7.37e-13!25;UBERON:0004121!1.51e-10!169;UBERON:0000475!3.28e-10!365;UBERON:0000924!1.00e-09!173;UBERON:0006601!1.00e-09!173;UBERON:0002308!1.22e-07!9;UBERON:0000125!1.22e-07!9;UBERON:0002420!1.40e-07!9;UBERON:0007245!1.40e-07!9;UBERON:0010009!1.40e-07!9;UBERON:0010011!1.40e-07!9;UBERON:0000454!1.40e-07!9;UBERON:0003076!2.27e-07!15;UBERON:0003057!2.27e-07!15;UBERON:0007023!9.24e-07!115 | |||
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| |||
|short_description=p5@BEND6 | |||
}} |
Revision as of 21:31, 13 September 2013
Short description: | p5@BEND6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_BEND6_5end |
Coexpression cluster: | NA |
Association with transcript: | -165bp_to_ENST00000322055, ENST00000370750, NM_152731, uc003pdg.2, uc010kab.2_5end |
EntrezGene: | BEND6 |
HGNC: | 20871 |
UniProt: | Q5SZK0Q5SZJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.84e-12 | 5 |
myotonic disease | 5.84e-12 | 5 |
muscle tissue disease | 5.84e-12 | 5 |
myopathy | 5.84e-12 | 5 |
muscular disease | 5.84e-12 | 5 |
myotonic dystrophy | 5.84e-12 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.