FFCP PHASE1:Hg19::chr6:40555038..40555051,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57497|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21226|TSSclassifier=S|UniProt=Q9ULH4|association_with_transcript=74bp_to_NM_020737,uc003oph.1_5end|coexpression_cluster_id=C3|description=CAGE_peak_5_at_LRFN2_5end|id=chr6:40555038..40555051,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;6.07e-12;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!1.91e-67!41;UBERON:0001890!1.91e-67!41;UBERON:0006240!1.91e-67!41;UBERON:0001049!5.85e-67!57;UBERON:0005068!5.85e-67!57;UBERON:0006241!5.85e-67!57;UBERON:0007135!5.85e-67!57;UBERON:0003080!1.01e-65!42;UBERON:0005743!3.27e-64!86;UBERON:0001017!4.09e-64!82;UBERON:0002619!1.99e-63!22;UBERON:0001950!6.62e-63!20;UBERON:0000955!3.59e-61!69;UBERON:0006238!3.59e-61!69;UBERON:0000073!1.22e-60!94;UBERON:0001016!1.22e-60!94;UBERON:0002616!2.56e-60!59;UBERON:0001893!1.90e-59!34;UBERON:0001869!4.96e-58!32;UBERON:0002791!8.80e-56!33;UBERON:0000956!1.48e-55!25;UBERON:0000203!1.48e-55!25;UBERON:0002346!6.55e-55!90;UBERON:0003075!2.24e-54!86;UBERON:0007284!2.24e-54!86;UBERON:0003056!1.42e-50!61;UBERON:0002020!3.18e-49!34;UBERON:0003528!3.18e-49!34;UBERON:0007023!4.09e-39!115;UBERON:0000033!7.33e-38!123;UBERON:0000153!9.64e-36!129;UBERON:0007811!9.64e-36!129;UBERON:0000924!3.67e-33!173;UBERON:0006601!3.67e-33!173;UBERON:0004121!3.60e-32!169;UBERON:0000200!4.06e-26!6;UBERON:0001872!7.05e-22!5;UBERON:0001871!1.08e-18!7;UBERON:0000025!8.94e-16!194;UBERON:0002021!3.44e-14!5;UBERON:0002771!1.29e-13!3;UBERON:0004111!3.58e-12!241;UBERON:0000483!3.55e-10!309;UBERON:0000064!3.88e-10!219;UBERON:0001870!5.20e-10!2;UBERON:0000119!5.33e-10!312;UBERON:0000477!6.65e-10!286;UBERON:0001894!2.18e-09!7;UBERON:0006222!2.18e-09!7;UBERON:0002360!4.17e-09!2;UBERON:0000094!4.17e-09!2;UBERON:0007645!4.17e-09!2;UBERON:0001905!4.92e-09!2;UBERON:0002757!4.92e-09!2;UBERON:0010134!4.92e-09!2;UBERON:0002784!4.92e-09!2;UBERON:0005408!4.92e-09!2;UBERON:0001899!4.92e-09!2;UBERON:0001897!5.12e-09!2;UBERON:0000475!8.25e-09!365;UBERON:0000349!7.84e-08!5|ontology_enrichment_uberon_v019=UBERON:0001950;1.83e-90;20!UBERON:0002619;2.13e-82;22!UBERON:0000956;1.26e-72;25!UBERON:0000203;1.26e-72;25!UBERON:0001869;1.06e-63;32!UBERON:0001893;6.15e-58;34!UBERON:0002791;2.81e-55;32!UBERON:0003528;8.47e-54;34!UBERON:0002020;8.47e-54;34!UBERON:0000200;1.03e-51;6!UBERON:0002780;7.37e-36;41!UBERON:0001890;7.37e-36;41!UBERON:0001872;1.33e-28;5!UBERON:0002021;6.67e-28;5!UBERON:0001870;1.51e-26;3!UBERON:0000073;7.58e-24;53!UBERON:0002616;7.58e-24;53!UBERON:0001017;2.91e-19;75!UBERON:0000955;1.23e-18;68!UBERON:0002771;2.64e-18;2!UBERON:0002702;2.64e-18;2!UBERON:0001016;7.68e-13;83!UBERON:0001871;9.93e-12;6!UBERON:0002581;1.80e-10;1!UBERON:0002022;1.80e-10;1!UBERON:0002902;5.06e-10;1!UBERON:0001882;5.06e-10;1!UBERON:0003112;5.06e-10;1!UBERON:0011158;5.06e-10;1!UBERON:0009899;5.06e-10;1!UBERON:0007190;5.06e-10;1!UBERON:0003128;5.06e-10;1!UBERON:0005403;5.06e-10;1!UBERON:0001703;5.06e-10;1!UBERON:0002241;5.06e-10;1!UBERON:0007023;2.34e-08;114!UBERON:0011216;8.11e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.38e-90,20;UBERON:0002619,1.64e-82,22;UBERON:0001869,3.47e-73,32;UBERON:0000956,1.00e-72,25;UBERON:0000203,1.00e-72,25;UBERON:0001893,7.43e-69,34;UBERON:0002791,1.40e-64,32;UBERON:0003528,9.54e-61,34;UBERON:0002020,9.54e-61,34;UBERON:0002780,6.09e-57,41;UBERON:0001890,6.09e-57,41;UBERON:0003080,6.09e-57,41;UBERON:0006240,6.09e-57,41;UBERON:0000200,7.08e-52,6;UBERON:0000073,1.08e-43,53;UBERON:0002616,1.08e-43,53;UBERON:0000955,7.15e-42,68;UBERON:0006238,7.15e-42,68;UBERON:0001049,2.98e-41,56;UBERON:0005068,2.98e-41,56;UBERON:0006241,2.98e-41,56;UBERON:0007135,2.98e-41,56;UBERON:0001017,7.76e-39,81;UBERON:0003056,1.05e-37,61;UBERON:0001016,9.68e-35,89;UBERON:0002346,2.09e-29,86;UBERON:0001872,1.54e-28,5;UBERON:0002021,9.53e-28,5;UBERON:0003075,1.82e-27,82;UBERON:0007284,1.82e-27,82;UBERON:0001870,6.05e-27,3;UBERON:0007023,1.66e-24,114;UBERON:0010371,4.02e-21,104;UBERON:0004121,7.37e-19,171;UBERON:0000924,7.37e-19,171;UBERON:0006601,7.37e-19,171;UBERON:0002702,1.56e-18,2;UBERON:0010314,3.32e-18,132;UBERON:0002771,4.89e-18,2;UBERON:0011216,2.77e-15,223;UBERON:0001871,9.79e-12,6;UBERON:0002022,1.65e-10,1;UBERON:0002581,1.98e-10,1;UBERON:0007190,2.84e-10,1;UBERON:0000025,3.62e-10,192;UBERON:0003112,8.99e-10,1;UBERON:0011158,8.99e-10,1;UBERON:0003128,8.99e-10,1;UBERON:0001703,8.99e-10,1;UBERON:0002241,8.99e-10,1;UBERON:0004761,8.99e-10,1;UBERON:0009617,8.99e-10,1;UBERON:0002902,1.07e-09,1;UBERON:0009899,1.07e-09,1;UBERON:0001882,1.17e-09,1;UBERON:0005403,1.17e-09,1;UBERON:0004111,1.50e-07,240|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57497 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21226 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULH4 | |||
|association_with_transcript=74bp_to_NM_020737,uc003oph.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_LRFN2_5end | |||
|id=chr6:40555038..40555051,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.07e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.91e-67!41;UBERON:0001890!1.91e-67!41;UBERON:0006240!1.91e-67!41;UBERON:0001049!5.85e-67!57;UBERON:0005068!5.85e-67!57;UBERON:0006241!5.85e-67!57;UBERON:0007135!5.85e-67!57;UBERON:0003080!1.01e-65!42;UBERON:0005743!3.27e-64!86;UBERON:0001017!4.09e-64!82;UBERON:0002619!1.99e-63!22;UBERON:0001950!6.62e-63!20;UBERON:0000955!3.59e-61!69;UBERON:0006238!3.59e-61!69;UBERON:0000073!1.22e-60!94;UBERON:0001016!1.22e-60!94;UBERON:0002616!2.56e-60!59;UBERON:0001893!1.90e-59!34;UBERON:0001869!4.96e-58!32;UBERON:0002791!8.80e-56!33;UBERON:0000956!1.48e-55!25;UBERON:0000203!1.48e-55!25;UBERON:0002346!6.55e-55!90;UBERON:0003075!2.24e-54!86;UBERON:0007284!2.24e-54!86;UBERON:0003056!1.42e-50!61;UBERON:0002020!3.18e-49!34;UBERON:0003528!3.18e-49!34;UBERON:0007023!4.09e-39!115;UBERON:0000033!7.33e-38!123;UBERON:0000153!9.64e-36!129;UBERON:0007811!9.64e-36!129;UBERON:0000924!3.67e-33!173;UBERON:0006601!3.67e-33!173;UBERON:0004121!3.60e-32!169;UBERON:0000200!4.06e-26!6;UBERON:0001872!7.05e-22!5;UBERON:0001871!1.08e-18!7;UBERON:0000025!8.94e-16!194;UBERON:0002021!3.44e-14!5;UBERON:0002771!1.29e-13!3;UBERON:0004111!3.58e-12!241;UBERON:0000483!3.55e-10!309;UBERON:0000064!3.88e-10!219;UBERON:0001870!5.20e-10!2;UBERON:0000119!5.33e-10!312;UBERON:0000477!6.65e-10!286;UBERON:0001894!2.18e-09!7;UBERON:0006222!2.18e-09!7;UBERON:0002360!4.17e-09!2;UBERON:0000094!4.17e-09!2;UBERON:0007645!4.17e-09!2;UBERON:0001905!4.92e-09!2;UBERON:0002757!4.92e-09!2;UBERON:0010134!4.92e-09!2;UBERON:0002784!4.92e-09!2;UBERON:0005408!4.92e-09!2;UBERON:0001899!4.92e-09!2;UBERON:0001897!5.12e-09!2;UBERON:0000475!8.25e-09!365;UBERON:0000349!7.84e-08!5 | |||
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|short_description=p5@LRFN2 | |||
}} |
Revision as of 20:56, 13 September 2013
Short description: | p5@LRFN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LRFN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 74bp_to_NM_020737, uc003oph.1_5end |
EntrezGene: | LRFN2 |
HGNC: | 21226 |
UniProt: | Q9ULH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.