FFCP PHASE1:Mm9::chr1:74171089..74171146,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21961|HGNC=|MCL_coexpression_id=3279|UniProt=E9Q0S6,E9Q6Y2|association_with_transcript=-68bp_to_ENSMUST00000169786,ENSMUST00000171899,NM_027884,uc011wmx.1_5end|description=CAGE_peak_2_at_Tns1_5end|id=chr1:74171089..74171146,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!1.45e-07!43;UBERON:0007100!4.81e-07!18;UBERON:0000948!4.81e-07!18;UBERON:0005498!4.81e-07!18;UBERON:0004140!4.81e-07!18;UBERON:0009881!4.81e-07!18;UBERON:0004141!4.81e-07!18;UBERON:0003084!4.81e-07!18;UBERON:0007005!4.81e-07!18;UBERON:0004139!4.81e-07!18;UBERON:0004291!4.81e-07!18;UBERON:0002553!6.61e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.91e-07,43;UBERON:0007100,2.73e-07,18;UBERON:0000948,2.73e-07,18;UBERON:0005498,2.73e-07,18;UBERON:0004140,2.73e-07,18;UBERON:0009881,2.73e-07,18;UBERON:0004141,2.73e-07,18;UBERON:0003084,2.73e-07,18;UBERON:0007005,2.73e-07,18;UBERON:0004139,2.73e-07,18;UBERON:0004291,2.73e-07,18;UBERON:0002553,8.34e-07,39|phase1_expression=4.64431656603902,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0,0.171200729931206,0.0874204024189974,0,0.404950534779652,0,0,0.274228867211478,0,6.20816018102809,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0,1.00717454380462,1.4192770370732,0,2.34717403304412,8.93903141159831,6.81027166476863,9.72149495371417,1.67983705950435,1.43752564364972,0,0.725362142011344,0,1.54355661621568,2.0057340795713,4.12537673821954,1.41621522601718,1.5869729378161,3.80298842103708,1.0165335962074,0.889294796111139,0.449949858640699,0,0,0.599200221036809,1.15265491596466,3.11068836925433,2.43010688997043,2.3135745748652,1.42825492201902,2.20868540951614,1.34739879136449,1.53352753629178,2.75765635983006,0,0.510749352340751,0.921639199537461,1.18697658957174,1.37231465403614,2.6045668527838,1.11673199600552,1.12552522006336,0.15279824777681,1.17851434189467,1.56608848879013,1.4911955666024,0.075726193333184,0,5.79728977403356,0,0,0.539703191637817,2.59910566979068,7.16843019355737,6.17955448579708,0,0,0,2.67602497575693,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,4.5673551887624,0.517875767294343,11.4300447079915,1.38788261412909,4.26251669636998,3.92046345335299,2.41156224884196,4.70354828542819,9.67632753238501,4.44950941921873,51.6219704204085,0.884610551949874,2.26473589926373,1.54589062922275,3.87900202508178,0,2.92780797011547,0.628340120440365,3.0654846625031,0.599075622529601,0.599902730993408,0.127070227073065,1.3481157546434,1.83000241127451,0.628271760564322,0.173824320192276,0.511430914660661,1.24672826735736,0.648965052271031,3.7680564624617,2.73695335342205,1.26361379216837,9.25944165900485,1.04096354370163,1.14951052216736,3.42118046630164,2.56198190320716,1.56483948048054,2.0498195245576,1.21812241927647,4.65666067330228,0.646703978798527,1.51284864134255,2.63926686245923,3.06874025398605,3.33656699070717,3.1342694986995,6.1734640922383,4.17971960318836,0,0.51469581422943,0.568326998791185,1.86413195281952,1.64168241986767,3.78130329068131,5.44512891845984,7.47704080640135,9.56456099901745,13.2544348507732,16.6329508867764,15.5297905348335,21.228220638839,21.1776028662033,33.3192807233467,24.2691979126052,21.735461413814,30.330650639844,2.10289948564127,0.514523061896422,0.330418782983798,0.793351699990633,1.2797295032114,2.32236671860439,1.67527699718721,1.00841762311671,2.2237804384487,0.951128130562796,0.474529061544512,1.15289268306808,1.00534083520108,2.38747766449381,1.75467678407208,1.79763881730844,0.864552199498777,0.796565093017469,0.758671603812327,1.48523066392647,2.25415471346161,5.49858585182348,4.26695471768777,5.89140887078676,11.0031574596208,26.5698266363284,18.9968460688064,21.4711065223933,3.55743152504579,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.648540907100142,1.37280706594041,0,1.86070473834252,2.18426371180192,4.2938409251009,2.15276896226295,1.92977408545347,1.29327233116623,1.51593129416388,3.09633455239849,2.20668611507745,3.75504397261603,5.52770649557992,7.61739650835244,4.48807390072937,3.15270288212382,2.6575762757853,4.14582398509466,3.11340297959902,2.59027472798843,2.74833211304872,0,0,8.35999264132362,7.72622889653251,1.60550589987792,0.820481806145422,0,3.02965112645248,0.315508219416257,0.390438744296638,1.07711698866399,0.238968797952552,0.222798674082394,0,1.21443210502468,0.584511715822624,1.58115111178609,0.642642632843614,5.96148357874728,2.49291845134157,4.88660878060728,3.62934270539578,42.4784442687881,0.971122544619926,2.11626489875326,2.82907619633847,9.15435867930396,10.4527950300935,8.78656196771952,6.90714086007261,7.48644494607915,16.7499481705982,22.1379078007497,37.1287955693473,22.1285743739962,2.16073312837572,2.45781499187234,2.57204442037911,1.59606210278046,3.21063871683727,3.45552943264454,6.69822888052118,5.39744928546534,8.0496186928251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| ||
|EntrezGene=21961 | |||
|HGNC= | |||
|MCL_coexpression_id=3279 | |||
|UniProt=E9Q0S6,E9Q6Y2 | |||
|association_with_transcript=-68bp_to_ENSMUST00000169786,ENSMUST00000171899,NM_027884,uc011wmx.1_5end | |||
|description=CAGE_peak_2_at_Tns1_5end | |||
|id=chr1:74171089..74171146,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.45e-07!43;UBERON:0007100!4.81e-07!18;UBERON:0000948!4.81e-07!18;UBERON:0005498!4.81e-07!18;UBERON:0004140!4.81e-07!18;UBERON:0009881!4.81e-07!18;UBERON:0004141!4.81e-07!18;UBERON:0003084!4.81e-07!18;UBERON:0007005!4.81e-07!18;UBERON:0004139!4.81e-07!18;UBERON:0004291!4.81e-07!18;UBERON:0002553!6.61e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.91e-07,43;UBERON:0007100,2.73e-07,18;UBERON:0000948,2.73e-07,18;UBERON:0005498,2.73e-07,18;UBERON:0004140,2.73e-07,18;UBERON:0009881,2.73e-07,18;UBERON:0004141,2.73e-07,18;UBERON:0003084,2.73e-07,18;UBERON:0007005,2.73e-07,18;UBERON:0004139,2.73e-07,18;UBERON:0004291,2.73e-07,18;UBERON:0002553,8.34e-07,39 | |||
|phase1_expression=4.64431656603902,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0,0.171200729931206,0.0874204024189974,0,0.404950534779652,0,0,0.274228867211478,0,6.20816018102809,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0,1.00717454380462,1.4192770370732,0,2.34717403304412,8.93903141159831,6.81027166476863,9.72149495371417,1.67983705950435,1.43752564364972,0,0.725362142011344,0,1.54355661621568,2.0057340795713,4.12537673821954,1.41621522601718,1.5869729378161,3.80298842103708,1.0165335962074,0.889294796111139,0.449949858640699,0,0,0.599200221036809,1.15265491596466,3.11068836925433,2.43010688997043,2.3135745748652,1.42825492201902,2.20868540951614,1.34739879136449,1.53352753629178,2.75765635983006,0,0.510749352340751,0.921639199537461,1.18697658957174,1.37231465403614,2.6045668527838,1.11673199600552,1.12552522006336,0.15279824777681,1.17851434189467,1.56608848879013,1.4911955666024,0.075726193333184,0,5.79728977403356,0,0,0.539703191637817,2.59910566979068,7.16843019355737,6.17955448579708,0,0,0,2.67602497575693,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,4.5673551887624,0.517875767294343,11.4300447079915,1.38788261412909,4.26251669636998,3.92046345335299,2.41156224884196,4.70354828542819,9.67632753238501,4.44950941921873,51.6219704204085,0.884610551949874,2.26473589926373,1.54589062922275,3.87900202508178,0,2.92780797011547,0.628340120440365,3.0654846625031,0.599075622529601,0.599902730993408,0.127070227073065,1.3481157546434,1.83000241127451,0.628271760564322,0.173824320192276,0.511430914660661,1.24672826735736,0.648965052271031,3.7680564624617,2.73695335342205,1.26361379216837,9.25944165900485,1.04096354370163,1.14951052216736,3.42118046630164,2.56198190320716,1.56483948048054,2.0498195245576,1.21812241927647,4.65666067330228,0.646703978798527,1.51284864134255,2.63926686245923,3.06874025398605,3.33656699070717,3.1342694986995,6.1734640922383,4.17971960318836,0,0.51469581422943,0.568326998791185,1.86413195281952,1.64168241986767,3.78130329068131,5.44512891845984,7.47704080640135,9.56456099901745,13.2544348507732,16.6329508867764,15.5297905348335,21.228220638839,21.1776028662033,33.3192807233467,24.2691979126052,21.735461413814,30.330650639844,2.10289948564127,0.514523061896422,0.330418782983798,0.793351699990633,1.2797295032114,2.32236671860439,1.67527699718721,1.00841762311671,2.2237804384487,0.951128130562796,0.474529061544512,1.15289268306808,1.00534083520108,2.38747766449381,1.75467678407208,1.79763881730844,0.864552199498777,0.796565093017469,0.758671603812327,1.48523066392647,2.25415471346161,5.49858585182348,4.26695471768777,5.89140887078676,11.0031574596208,26.5698266363284,18.9968460688064,21.4711065223933,3.55743152504579,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.648540907100142,1.37280706594041,0,1.86070473834252,2.18426371180192,4.2938409251009,2.15276896226295,1.92977408545347,1.29327233116623,1.51593129416388,3.09633455239849,2.20668611507745,3.75504397261603,5.52770649557992,7.61739650835244,4.48807390072937,3.15270288212382,2.6575762757853,4.14582398509466,3.11340297959902,2.59027472798843,2.74833211304872,0,0,8.35999264132362,7.72622889653251,1.60550589987792,0.820481806145422,0,3.02965112645248,0.315508219416257,0.390438744296638,1.07711698866399,0.238968797952552,0.222798674082394,0,1.21443210502468,0.584511715822624,1.58115111178609,0.642642632843614,5.96148357874728,2.49291845134157,4.88660878060728,3.62934270539578,42.4784442687881,0.971122544619926,2.11626489875326,2.82907619633847,9.15435867930396,10.4527950300935,8.78656196771952,6.90714086007261,7.48644494607915,16.7499481705982,22.1379078007497,37.1287955693473,22.1285743739962,2.16073312837572,2.45781499187234,2.57204442037911,1.59606210278046,3.21063871683727,3.45552943264454,6.69822888052118,5.39744928546534,8.04961869282517,8.15955072803359,14.1802177529673,4.52100394748536,7.72005439080395,6.08798954415996,5.25250879184196,1.45740418314925,1.66882771809459,1.02522528478712,2.06386867963222,1.85194527369712,0.565105371014073,0.410082683163076,0,3.0596117398894,2.37917468950219,1.93479963326193,4.77335309007557,0.632671987162271,1.62655573701479,0.86404272657441,2.50905955217362,1.52853794622324,3.64133735239016,6.94289028092822,10.2084817373772,0.648074866458964,11.8054469486516,2.25477175473676,5.38259565758324,5.62558867554132,8.94475466382619,7.62042958518613,9.63049915297436,10.6795087167636,11.8485990207995,2.30690557736564,0.241584120826006,3.16833006883652,1.26404448251271,1.62180172232131,1.33524244314275,0.389762468933385,0.537080087002444,1.39076948346885,0.120195449519969,0.295379054349154,0.403865799792591,0.0762068066549998,0.201652370273681,0.38983152295901,0,0,10.4295976462997,0.443971906748129,0,1.17519231454855,6.95482538515886,0.93841237725591,1.83151624267265,3.21552568618599,7.02200945649509,0.564751842617067,0,0.572895513439397,0.343706364687375,0,1.5107877947794,0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| |||
|short_description=p2@Tns1 | |||
}} | |||
Revision as of 20:54, 13 September 2013
| Short description: | p2@Tns1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Tns1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3279 |
| Association with transcript: | -68bp_to_ENSMUST00000169786, ENSMUST00000171899, NM_027884, uc011wmx.1_5end |
| EntrezGene: | Tns1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| compound organ | 1.91e-07 | 43 |
| primary circulatory organ | 2.73e-07 | 18 |
| heart | 2.73e-07 | 18 |
| primitive heart tube | 2.73e-07 | 18 |
| primary heart field | 2.73e-07 | 18 |
| anterior lateral plate mesoderm | 2.73e-07 | 18 |
| heart tube | 2.73e-07 | 18 |
| heart primordium | 2.73e-07 | 18 |
| cardiac mesoderm | 2.73e-07 | 18 |
| cardiogenic plate | 2.73e-07 | 18 |
| heart rudiment | 2.73e-07 | 18 |
| anatomical cavity | 8.34e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
