FFCP PHASE1:Mm9::chr1:6204887..6204898,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12421|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=143bp_to_ENSMUST00000162210_5end|description=CAGE_peak_11_at_Rb1cc1_5end|id=chr1:6204887..6204898,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.05e-12,14;UBERON:0003135,2.29e-11,15;UBERON:0003101,1.05e-10,16;UBERON:0000079,1.05e-10,16;UBERON:0004176,4.01e-10,17;UBERON:0009196,4.01e-10,17;UBERON:0009117,4.01e-10,17;UBERON:0000991,1.33e-09,18;UBERON:0005564,1.33e-09,18;UBERON:0003133,2.18e-07,24;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,2.12608225377674,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0.254140454146129,0.149790639404823,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.233530684734339,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,19.1655599152625,0,0,0.194451188344048,0,0,0.234714477291508,0,0,7.48910774560619,9.50499020650956,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0,1.35942722695261,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p11@Rb1cc1}} | ||
|EntrezGene=12421 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt= | |||
|association_with_transcript=143bp_to_ENSMUST00000162210_5end | |||
|description=CAGE_peak_11_at_Rb1cc1_5end | |||
|id=chr1:6204887..6204898,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.05e-12,14;UBERON:0003135,2.29e-11,15;UBERON:0003101,1.05e-10,16;UBERON:0000079,1.05e-10,16;UBERON:0004176,4.01e-10,17;UBERON:0009196,4.01e-10,17;UBERON:0009117,4.01e-10,17;UBERON:0000991,1.33e-09,18;UBERON:0005564,1.33e-09,18;UBERON:0003133,2.18e-07,24;UBERON:0005156,7.12e-07,26;UBERON:0000990,7.12e-07,26 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0.174840804837995,0,0,0,0,0.137114433605739,0,2.12608225377674,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0.254140454146129,0.149790639404823,0,0,0.173824320192276,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.233530684734339,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,19.1655599152625,0,0,0.194451188344048,0,0,0.234714477291508,0,0,7.48910774560619,9.50499020650956,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0,1.35942722695261,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p11@Rb1cc1 | |||
}} |
Revision as of 20:40, 13 September 2013
Short description: | p11@Rb1cc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Rb1cc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 143bp_to_ENSMUST00000162210_5end |
EntrezGene: | Rb1cc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 4.05e-12 | 14 |
male reproductive organ | 2.29e-11 | 15 |
male organism | 1.05e-10 | 16 |
male reproductive system | 1.05e-10 | 16 |
external genitalia | 4.01e-10 | 17 |
indifferent external genitalia | 4.01e-10 | 17 |
indifferent gonad | 4.01e-10 | 17 |
gonad | 1.33e-09 | 18 |
gonad primordium | 1.33e-09 | 18 |
reproductive organ | 2.18e-07 | 24 |
reproductive structure | 7.12e-07 | 26 |
reproductive system | 7.12e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.