FFCP PHASE1:Mm9::chr1:58784094..58784105,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=659|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:58784094..58784105,+|id=chr1:58784094..58784105,+|ontology_enrichment_celltype=CL:0000355!9.69e-12!9;CL:0000144!7.04e-11!121;CL:0000012!7.04e-11!121;CL:0000034!2.48e-10!97;CL:0000215!2.03e-08!3;CL:0002371!3.14e-08!118;CL:0000624!4.10e-08!8;CL:0000222!4.90e-08!7;CL:0000893!1.49e-07!6;CL:0002489!1.49e-07!6;CL:0000898!1.49e-07!6;CL:0000809!1.49e-07!6;CL:0000810!1.49e-07!6;CL:0000895!1.49e-07!6;CL:0000808!1.49e-07!6;CL:0000894!1.49e-07!6;CL:0000806!1.49e-07!6;CL:0000807!1.49e-07!6;CL:0000805!1.49e-07!6;CL:0002425!1.49e-07!6;CL:0002436!1.49e-07!6;CL:0002427!1.49e-07!6;CL:0002428!1.49e-07!6;CL:0002429!1.49e-07!6;CL:0002433!1.49e-07!6;CL:0002431!1.49e-07!6;CL:0002432!1.49e-07!6;CL:0000988!1.54e-07!32;CL:0002032!1.54e-07!32;CL:0000037!1.54e-07!32;CL:0000566!1.54e-07!32;CL:0000837!1.54e-07!32;CL:0000219!2.33e-07!54;CL:0000723!3.35e-07!91;CL:0000048!3.35e-07!91;CL:0000791!3.67e-07!9;CL:0000789!3.67e-07!9;CL:0002420!3.67e-07!9;CL:0002419!3.67e-07!9;CL:0000790!3.67e-07!9;CL:0000192!4.84e-07!3;CL:0000359!4.84e-07!3;CL:0002539!4.84e-07!3;CL:0000514!4.84e-07!3|ontology_enrichment_celltype_v019_2=CL:0000893,8.56e-15,6;CL:0002489,8.56e-15,6;CL:0000898,8.56e-15,6;CL:0000809,8.56e-15,6;CL:0000810,8.56e-15,6;CL:0000895,8.56e-15,6;CL:0000808,8.56e-15,6;CL:0000894,8.56e-15,6;CL:0000806,8.56e-15,6;CL:0000807,8.56e-15,6;CL:0000805,8.56e-15,6;CL:0002425,8.56e-15,6;CL:0002436,8.56e-15,6;CL:0002427,8.56e-15,6;CL:0002428,8.56e-15,6;CL:0002429,8.56e-15,6;CL:0002433,8.56e-15,6;CL:0002431,8.56e-15,6;CL:0002432,8.56e-15,6;CL:0000624,3.81e-11,8;CL:0000791,6.33e-10,9;CL:0000789,6.33e-10,9;CL:0002420,6.33e-10,9;CL:0002419,6.33e-10,9;CL:0000790,6.33e-10,9;CL:0000215,3.35e-08,3;CL:0000084,3.81e-08,11;CL:0000827,3.81e-08,11;CL:0000988,1.57e-07,32;CL:0002032,1.57e-07,32;CL:0000037,1.57e-07,32;CL:0000837,1.57e-07,32;CL:0000838,1.78e-07,12;CL:0000034,2.49e-07,97;CL:0000219,6.55e-07,54;CL:0000542,6.56e-07,13;CL:0000051,6.56e-07,13;CL:0000213,7.38e-07,1;CL:0002078,7.38e-07,1;CL:0000115,7.38e-07,1;CL:0002262,7.38e-07,1;CL:1000398,7.38e-07,1|ontology_enrichment_disease=DOID:0060100!4.43e-08!3;DOID:4045!4.43e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.29e-07,3;DOID:4045,1.29e-07,3|ontology_enrichment_uberon=UBERON:0001134!9.69e-12!9;UBERON:0002036!9.69e-12!9;UBERON:0002385!9.69e-12!9;UBERON:0000486!9.69e-12!9;UBERON:0001015!9.69e-12!9;UBERON:0004290!9.69e-12!9;UBERON:0003082!9.69e-12!9;UBERON:0000383!1.81e-10!10;UBERON:0002329!1.99e-09!11;UBERON:0003077!1.99e-09!11;UBERON:0003059!1.99e-09!11;UBERON:0007282!1.99e-09!11;UBERON:0009618!1.99e-09!11;UBERON:0007285!1.99e-09!11;UBERON:0000055!1.31e-07!5;UBERON:0001981!1.31e-07!5;UBERON:0002049!1.31e-07!5;UBERON:0007500!1.31e-07!5;UBERON:0007798!1.31e-07!5;UBERON:0004537!1.31e-07!5;UBERON:0006965!1.31e-07!5;UBERON:0001135!4.84e-07!3;UBERON:0004237!4.84e-07!3;UBERON:0004695!4.84e-07!3;UBERON:0002111!4.84e-07!3;UBERON:0004178!4.84e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.38e-07,1;UBERON:0001281,7.38e-07,1;UBERON:0000353,7.38e-07,1;UBERON:0003497,7.38e-07,1;UBERON:0003909,7.38e-07,1;UBERON:0003928,7.38e-07,1;UBERON:0003835,7.38e-07,1;UBERON:0003513,7.38e-07,1;UBERON:0001280,7.38e-07,1;UBERON:0004647,7.38e-07,1;UBERON:0002294,7.38e-07,1;UBERON:0001173,7.38e-07,1;UBERON:0004912,7.38e-07,1;UBERON:0005171,7.38e-07,1|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,5.20918271961167,1.63845168425395,3.4243593645101,1.83475965689274,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0.646413698057667,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,1.0470474879476,1.17646297606203,1.36609096991689,1.94204141212461,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8931548333296,0.302286240427142,2.6087803983151,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0.599902730993408,1.39777249780371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,1.11961161858926,1.93479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:58784094..58784105,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=659 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:58784094..58784105,+ | |||
|id=chr1:58784094..58784105,+ | |||
|ontology_enrichment_celltype=CL:0000355!9.69e-12!9;CL:0000144!7.04e-11!121;CL:0000012!7.04e-11!121;CL:0000034!2.48e-10!97;CL:0000215!2.03e-08!3;CL:0002371!3.14e-08!118;CL:0000624!4.10e-08!8;CL:0000222!4.90e-08!7;CL:0000893!1.49e-07!6;CL:0002489!1.49e-07!6;CL:0000898!1.49e-07!6;CL:0000809!1.49e-07!6;CL:0000810!1.49e-07!6;CL:0000895!1.49e-07!6;CL:0000808!1.49e-07!6;CL:0000894!1.49e-07!6;CL:0000806!1.49e-07!6;CL:0000807!1.49e-07!6;CL:0000805!1.49e-07!6;CL:0002425!1.49e-07!6;CL:0002436!1.49e-07!6;CL:0002427!1.49e-07!6;CL:0002428!1.49e-07!6;CL:0002429!1.49e-07!6;CL:0002433!1.49e-07!6;CL:0002431!1.49e-07!6;CL:0002432!1.49e-07!6;CL:0000988!1.54e-07!32;CL:0002032!1.54e-07!32;CL:0000037!1.54e-07!32;CL:0000566!1.54e-07!32;CL:0000837!1.54e-07!32;CL:0000219!2.33e-07!54;CL:0000723!3.35e-07!91;CL:0000048!3.35e-07!91;CL:0000791!3.67e-07!9;CL:0000789!3.67e-07!9;CL:0002420!3.67e-07!9;CL:0002419!3.67e-07!9;CL:0000790!3.67e-07!9;CL:0000192!4.84e-07!3;CL:0000359!4.84e-07!3;CL:0002539!4.84e-07!3;CL:0000514!4.84e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,8.56e-15,6;CL:0002489,8.56e-15,6;CL:0000898,8.56e-15,6;CL:0000809,8.56e-15,6;CL:0000810,8.56e-15,6;CL:0000895,8.56e-15,6;CL:0000808,8.56e-15,6;CL:0000894,8.56e-15,6;CL:0000806,8.56e-15,6;CL:0000807,8.56e-15,6;CL:0000805,8.56e-15,6;CL:0002425,8.56e-15,6;CL:0002436,8.56e-15,6;CL:0002427,8.56e-15,6;CL:0002428,8.56e-15,6;CL:0002429,8.56e-15,6;CL:0002433,8.56e-15,6;CL:0002431,8.56e-15,6;CL:0002432,8.56e-15,6;CL:0000624,3.81e-11,8;CL:0000791,6.33e-10,9;CL:0000789,6.33e-10,9;CL:0002420,6.33e-10,9;CL:0002419,6.33e-10,9;CL:0000790,6.33e-10,9;CL:0000215,3.35e-08,3;CL:0000084,3.81e-08,11;CL:0000827,3.81e-08,11;CL:0000988,1.57e-07,32;CL:0002032,1.57e-07,32;CL:0000037,1.57e-07,32;CL:0000837,1.57e-07,32;CL:0000838,1.78e-07,12;CL:0000034,2.49e-07,97;CL:0000219,6.55e-07,54;CL:0000542,6.56e-07,13;CL:0000051,6.56e-07,13;CL:0000213,7.38e-07,1;CL:0002078,7.38e-07,1;CL:0000115,7.38e-07,1;CL:0002262,7.38e-07,1;CL:1000398,7.38e-07,1 | |||
|ontology_enrichment_disease=DOID:0060100!4.43e-08!3;DOID:4045!4.43e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.29e-07,3;DOID:4045,1.29e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!9.69e-12!9;UBERON:0002036!9.69e-12!9;UBERON:0002385!9.69e-12!9;UBERON:0000486!9.69e-12!9;UBERON:0001015!9.69e-12!9;UBERON:0004290!9.69e-12!9;UBERON:0003082!9.69e-12!9;UBERON:0000383!1.81e-10!10;UBERON:0002329!1.99e-09!11;UBERON:0003077!1.99e-09!11;UBERON:0003059!1.99e-09!11;UBERON:0007282!1.99e-09!11;UBERON:0009618!1.99e-09!11;UBERON:0007285!1.99e-09!11;UBERON:0000055!1.31e-07!5;UBERON:0001981!1.31e-07!5;UBERON:0002049!1.31e-07!5;UBERON:0007500!1.31e-07!5;UBERON:0007798!1.31e-07!5;UBERON:0004537!1.31e-07!5;UBERON:0006965!1.31e-07!5;UBERON:0001135!4.84e-07!3;UBERON:0004237!4.84e-07!3;UBERON:0004695!4.84e-07!3;UBERON:0002111!4.84e-07!3;UBERON:0004178!4.84e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.38e-07,1;UBERON:0001281,7.38e-07,1;UBERON:0000353,7.38e-07,1;UBERON:0003497,7.38e-07,1;UBERON:0003909,7.38e-07,1;UBERON:0003928,7.38e-07,1;UBERON:0003835,7.38e-07,1;UBERON:0003513,7.38e-07,1;UBERON:0001280,7.38e-07,1;UBERON:0004647,7.38e-07,1;UBERON:0002294,7.38e-07,1;UBERON:0001173,7.38e-07,1;UBERON:0004912,7.38e-07,1;UBERON:0005171,7.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,5.20918271961167,1.63845168425395,3.4243593645101,1.83475965689274,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0.646413698057667,0,0,0,0,0,0,0,0,0,0.418531630736908,1.5626706890476,1.0470474879476,1.17646297606203,1.36609096991689,1.94204141212461,0.125896817975577,0.101376931219515,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8931548333296,0.302286240427142,2.6087803983151,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0.599902730993408,1.39777249780371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,1.54408744268829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,1.11961161858926,1.93479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:58784094..58784105,+ | |||
}} |
Revision as of 20:36, 13 September 2013
Short description: | p@chr1:58784094..58784105, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:58784094..58784105, + |
Coexpression cluster: | MCL_coexpression_mm9:659 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bile duct | 7.38e-07 | 1 |
hepatic sinusoid | 7.38e-07 | 1 |
parenchyma | 7.38e-07 | 1 |
abdomen blood vessel | 7.38e-07 | 1 |
sinusoid | 7.38e-07 | 1 |
digestive system duct | 7.38e-07 | 1 |
abdominal segment blood vessel | 7.38e-07 | 1 |
trunk blood vessel | 7.38e-07 | 1 |
liver parenchyma | 7.38e-07 | 1 |
liver lobule | 7.38e-07 | 1 |
biliary system | 7.38e-07 | 1 |
biliary tree | 7.38e-07 | 1 |
biliary bud | 7.38e-07 | 1 |
hepatic duct | 7.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.29e-07 | 3 |
muscle cancer | 1.29e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.