FFCP PHASE1:Mm9::chr1:39777834..39777860,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=619289|HGNC=|MCL_coexpression_id=0|UniProt=D3YU81|association_with_transcript=0bp_to_ENSMUST00000151913,NM_001145660,uc007atn.2_5end|description=CAGE_peak_1_at_Rfx8_5end|id=chr1:39777834..39777860,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!3.84e-12!18;UBERON:0005564!3.84e-12!18;UBERON:0004176!3.60e-11!17;UBERON:0009196!3.60e-11!17;UBERON:0009117!3.60e-11!17;UBERON:0000473!2.28e-10!14;UBERON:0003135!1.73e-09!15;UBERON:0003101!1.02e-08!16;UBERON:0000079!1.02e-08!16;UBERON:0003133!3.56e-08!24;UBERON:0005156!2.83e-07!26;UBERON:0000990!2.83e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.07e-10,14;UBERON:0003135,1.32e-09,15;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0004176,1.48e-08,17;UBERON:0009196,1.48e-08,17;UBERON:0009117,1.48e-08,17;UBERON:0000991,4.05e-08,18;UBERON:0005564,4.05e-08,18|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5658874605455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0.162241263067758,0.101839363850316,0,0,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,94.700413698944,0.299033092087958,0,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,29.2316786199467,56.4538812265416,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0,0,0.25384382367503,0,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p1@Rfx8}} | ||
|EntrezGene=619289 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=D3YU81 | |||
|association_with_transcript=0bp_to_ENSMUST00000151913,NM_001145660,uc007atn.2_5end | |||
|description=CAGE_peak_1_at_Rfx8_5end | |||
|id=chr1:39777834..39777860,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!3.84e-12!18;UBERON:0005564!3.84e-12!18;UBERON:0004176!3.60e-11!17;UBERON:0009196!3.60e-11!17;UBERON:0009117!3.60e-11!17;UBERON:0000473!2.28e-10!14;UBERON:0003135!1.73e-09!15;UBERON:0003101!1.02e-08!16;UBERON:0000079!1.02e-08!16;UBERON:0003133!3.56e-08!24;UBERON:0005156!2.83e-07!26;UBERON:0000990!2.83e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.07e-10,14;UBERON:0003135,1.32e-09,15;UBERON:0003101,4.76e-09,16;UBERON:0000079,4.76e-09,16;UBERON:0004176,1.48e-08,17;UBERON:0009196,1.48e-08,17;UBERON:0009117,1.48e-08,17;UBERON:0000991,4.05e-08,18;UBERON:0005564,4.05e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5658874605455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0.162241263067758,0.101839363850316,0,0,0,0.130120442962704,0.459804208866946,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0,0,0,0,0,0.16455984991348,0,0,0.292399974850665,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,94.700413698944,0.299033092087958,0,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,29.2316786199467,56.4538812265416,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0,0,0.25384382367503,0,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p1@Rfx8 | |||
}} |
Revision as of 20:21, 13 September 2013
Short description: | p1@Rfx8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rfx8_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000151913, NM_001145660, uc007atn.2_5end |
EntrezGene: | Rfx8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 3.07e-10 | 14 |
male reproductive organ | 1.32e-09 | 15 |
male organism | 4.76e-09 | 16 |
male reproductive system | 4.76e-09 | 16 |
external genitalia | 1.48e-08 | 17 |
indifferent external genitalia | 1.48e-08 | 17 |
indifferent gonad | 1.48e-08 | 17 |
gonad | 4.05e-08 | 18 |
gonad primordium | 4.05e-08 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.