FFCP PHASE1:Mm9::chr1:183950058..183950120,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13800|HGNC=|UniProt=E9QLZ9,E9QKR1,Q03173,E9QKQ9|association_with_transcript=0bp_to_ENSMUST00000078719,ENSMUST00000111024,ENSMUST00000111025,ENSMUST00000111030,NM_001083120,NM_001083121,NM_008680,NM_010135,uc007dxp.1,uc007dxq.1,uc007dxr.1,uc007dxs.1,uc007dxt.1_5end|description=CAGE_peak_1_at_Enah_5end|id=chr1:183950058..183950120,-|ontology_enrichment_celltype=CL:0000540!8.32e-13!33;CL:0000047!8.32e-13!33;CL:0000031!8.32e-13!33;CL:0000404!8.32e-13!33;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0002319!3.79e-09!43;CL:0000393!4.52e-09!39;CL:0000211!4.52e-09!39;CL:0000107!4.01e-07!9;CL:0000117!5.89e-07!23;CL:0000337!5.89e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,7.89e-13,33;CL:0000047,7.89e-13,33;CL:0000031,7.89e-13,33;CL:0000404,7.89e-13,33;CL:0000221,1.11e-09,44;CL:0000133,1.11e-09,44;CL:0002319,3.66e-09,43;CL:0000393,4.37e-09,39;CL:0000211,4.37e-09,39;CL:0000107,3.91e-07,9;CL:0000117,5.74e-07,23;CL:0000337,5.74e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.79e-13!73;UBERON:0005743!6.79e-13!73;UBERON:0000073!7.57e-12!75;UBERON:0001016!7.57e-12!75;UBERON:0004121!6.71e-11!102;UBERON:0000924!6.71e-11!102;UBERON:0006601!6.71e-11!102;UBERON:0000468!2.78e-09!333;UBERON:0002346!8.56e-08!71;UBERON:0003075!8.56e-08!71;UBERON:0007284!8.56e-08!71;UBERON:0000033!1.11e-07!63;UBERON:0000922!2.55e-07!328;UBERON:0002410!4.01e-07!9;UBERON:0001049!6.17e-07!52;UBERON:0005068!6.17e-07!52;UBERON:0006241!6.17e-07!52;UBERON:0007135!6.17e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.45e-13,73;UBERON:0004121,5.77e-12,95;UBERON:0000924,5.77e-12,95;UBERON:0006601,5.77e-12,95;UBERON:0001016,7.22e-12,75;UBERON:0010314,2.64e-11,92;UBERON:0010371,2.11e-09,73;UBERON:0002346,6.39e-09,64;UBERON:0003075,6.39e-09,64;UBERON:0007284,6.39e-09,64;UBERON:0000922,6.40e-08,320;UBERON:0000073,2.69e-07,54;UBERON:0002410,3.91e-07,9;UBERON:0001049,6.02e-07,52;UBERON:0005068,6.02e-07,52;UBERON:0006241,6.02e-07,52;UBERON:0007135,6.02e-07,52|phase1_expression=76.8714466103011,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.936258105287974,0,0.0797721589953364,0,0,0.333109761815663,0.607425802169478,0,0,0,0,27.1288095581913,5.26242041364692,17.2391860831697,0,0.22940928106717,0.57423196411502,0,0,0,0,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,15.2335149750449,17.132701376098,32.6713218847793,22.6893489860931,37.0642765846759,37.5663372475947,42.5801478972681,32.6168362387095,47.4383462404406,0.167782606057736,0,0,3.8588915405392,5.73066879877513,4.64104883049698,68.1806473096844,44.9642332381228,57.6786577190623,15.9256930072492,17.7858959222228,8.99899717281399,6.92206453796882,9.2362414942993,22.1704081783619,31.1216827310459,76.8340027205819,65.0728622758749,72.9827615889296,44.5615535669934,38.4311261255808,68.8398291588042,67.6669025388749,53.3146896233812,44.0463523997555,70.6110979611088,68.2013007657721,74.7795251430199,58.5520919055422,62.5096044668112,48.0194758282375,51.7741601229146,56.6881499251965,60.1042314366282,58.7995041700295,73.0685827635178,3.25622631332691,5.51672388779534,22.0297011413275,1.72084775396277,1.3599426674155,0,1.29955283489534,0,14.8871085339657,75.6710632246576,54.2952749619996,46.2874842608546,81.125809791368,61.5967091588726,114.662357867991,177.766675788333,29.4427815775251,22.5490280272838,24.7706978057244,11.3042040921869,5.43769555659061,37.5558611834007,39.2076838491467,27.0974275697806,31.1330921295679,25.4721262533932,34.9238460193043,22.9969862133306,26.6970565153124,60.8763292632828,4.42305275974937,63.0890714794896,30.0344465106135,28.6076399349781,20.5030937339934,33.9625724533395,30.9981126083913,6.38642638021478,0.11981512450592,0.599902730993408,0,69.6526473232426,53.9850711325979,63.958065225448,46.0634448509533,40.1473268008619,82.4918536901454,64.7342639640353,35.1345805283591,32.4702193292343,39.4247503156533,18.7293251738962,55.3011882591491,51.9578756019649,50.9575827349138,46.1156742577288,60.0762287506225,50.9892606733702,51.3485450587314,41.1338359475035,65.3171018586512,87.5561151177003,66.1576226856448,56.9908904311695,55.8874970943452,71.7399463035663,67.4965407418054,45.9769156350719,0,0,0.284163499395593,69.1800080268576,55.1136240955576,57.9799837904468,65.8150364926884,63.358082622664,62.0153793807261,61.3889614141077,72.1655449764976,84.8884039009322,73.8873726111527,54.0110956820223,54.4782400148151,45.4681960892784,55.5461791686358,45.0933567034849,56.9885760608785,68.740281069362,1.32167513193519,6.61126416658861,46.2835503661458,67.5808715113876,54.2532012166013,40.5383884492919,38.4714015851626,29.1045207952215,10.4396393539793,21.2461651593974,21.3634927480229,21.6862554524854,24.1755468027709,11.6846523125049,15.561939590978,12.9441827615339,27.881181440103,41.8149556151607,37.1935527721165,38.0827983070738,38.5965449463575,46.7104560469522,36.6771915320692,33.0646731474309,29.5157608341785,33.9342200784951,0.296452627087149,11.846002505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| ||
|EntrezGene=13800 | |||
|HGNC= | |||
|UniProt=E9QLZ9,E9QKR1,Q03173,E9QKQ9 | |||
|association_with_transcript=0bp_to_ENSMUST00000078719,ENSMUST00000111024,ENSMUST00000111025,ENSMUST00000111030,NM_001083120,NM_001083121,NM_008680,NM_010135,uc007dxp.1,uc007dxq.1,uc007dxr.1,uc007dxs.1,uc007dxt.1_5end | |||
|description=CAGE_peak_1_at_Enah_5end | |||
|id=chr1:183950058..183950120,- | |||
|ontology_enrichment_celltype=CL:0000540!8.32e-13!33;CL:0000047!8.32e-13!33;CL:0000031!8.32e-13!33;CL:0000404!8.32e-13!33;CL:0000221!1.15e-09!44;CL:0000133!1.15e-09!44;CL:0002319!3.79e-09!43;CL:0000393!4.52e-09!39;CL:0000211!4.52e-09!39;CL:0000107!4.01e-07!9;CL:0000117!5.89e-07!23;CL:0000337!5.89e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.89e-13,33;CL:0000047,7.89e-13,33;CL:0000031,7.89e-13,33;CL:0000404,7.89e-13,33;CL:0000221,1.11e-09,44;CL:0000133,1.11e-09,44;CL:0002319,3.66e-09,43;CL:0000393,4.37e-09,39;CL:0000211,4.37e-09,39;CL:0000107,3.91e-07,9;CL:0000117,5.74e-07,23;CL:0000337,5.74e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.79e-13!73;UBERON:0005743!6.79e-13!73;UBERON:0000073!7.57e-12!75;UBERON:0001016!7.57e-12!75;UBERON:0004121!6.71e-11!102;UBERON:0000924!6.71e-11!102;UBERON:0006601!6.71e-11!102;UBERON:0000468!2.78e-09!333;UBERON:0002346!8.56e-08!71;UBERON:0003075!8.56e-08!71;UBERON:0007284!8.56e-08!71;UBERON:0000033!1.11e-07!63;UBERON:0000922!2.55e-07!328;UBERON:0002410!4.01e-07!9;UBERON:0001049!6.17e-07!52;UBERON:0005068!6.17e-07!52;UBERON:0006241!6.17e-07!52;UBERON:0007135!6.17e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.45e-13,73;UBERON:0004121,5.77e-12,95;UBERON:0000924,5.77e-12,95;UBERON:0006601,5.77e-12,95;UBERON:0001016,7.22e-12,75;UBERON:0010314,2.64e-11,92;UBERON:0010371,2.11e-09,73;UBERON:0002346,6.39e-09,64;UBERON:0003075,6.39e-09,64;UBERON:0007284,6.39e-09,64;UBERON:0000922,6.40e-08,320;UBERON:0000073,2.69e-07,54;UBERON:0002410,3.91e-07,9;UBERON:0001049,6.02e-07,52;UBERON:0005068,6.02e-07,52;UBERON:0006241,6.02e-07,52;UBERON:0007135,6.02e-07,52 | |||
|phase1_expression=76.8714466103011,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.936258105287974,0,0.0797721589953364,0,0,0.333109761815663,0.607425802169478,0,0,0,0,27.1288095581913,5.26242041364692,17.2391860831697,0,0.22940928106717,0.57423196411502,0,0,0,0,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,15.2335149750449,17.132701376098,32.6713218847793,22.6893489860931,37.0642765846759,37.5663372475947,42.5801478972681,32.6168362387095,47.4383462404406,0.167782606057736,0,0,3.8588915405392,5.73066879877513,4.64104883049698,68.1806473096844,44.9642332381228,57.6786577190623,15.9256930072492,17.7858959222228,8.99899717281399,6.92206453796882,9.2362414942993,22.1704081783619,31.1216827310459,76.8340027205819,65.0728622758749,72.9827615889296,44.5615535669934,38.4311261255808,68.8398291588042,67.6669025388749,53.3146896233812,44.0463523997555,70.6110979611088,68.2013007657721,74.7795251430199,58.5520919055422,62.5096044668112,48.0194758282375,51.7741601229146,56.6881499251965,60.1042314366282,58.7995041700295,73.0685827635178,3.25622631332691,5.51672388779534,22.0297011413275,1.72084775396277,1.3599426674155,0,1.29955283489534,0,14.8871085339657,75.6710632246576,54.2952749619996,46.2874842608546,81.125809791368,61.5967091588726,114.662357867991,177.766675788333,29.4427815775251,22.5490280272838,24.7706978057244,11.3042040921869,5.43769555659061,37.5558611834007,39.2076838491467,27.0974275697806,31.1330921295679,25.4721262533932,34.9238460193043,22.9969862133306,26.6970565153124,60.8763292632828,4.42305275974937,63.0890714794896,30.0344465106135,28.6076399349781,20.5030937339934,33.9625724533395,30.9981126083913,6.38642638021478,0.11981512450592,0.599902730993408,0,69.6526473232426,53.9850711325979,63.958065225448,46.0634448509533,40.1473268008619,82.4918536901454,64.7342639640353,35.1345805283591,32.4702193292343,39.4247503156533,18.7293251738962,55.3011882591491,51.9578756019649,50.9575827349138,46.1156742577288,60.0762287506225,50.9892606733702,51.3485450587314,41.1338359475035,65.3171018586512,87.5561151177003,66.1576226856448,56.9908904311695,55.8874970943452,71.7399463035663,67.4965407418054,45.9769156350719,0,0,0.284163499395593,69.1800080268576,55.1136240955576,57.9799837904468,65.8150364926884,63.358082622664,62.0153793807261,61.3889614141077,72.1655449764976,84.8884039009322,73.8873726111527,54.0110956820223,54.4782400148151,45.4681960892784,55.5461791686358,45.0933567034849,56.9885760608785,68.740281069362,1.32167513193519,6.61126416658861,46.2835503661458,67.5808715113876,54.2532012166013,40.5383884492919,38.4714015851626,29.1045207952215,10.4396393539793,21.2461651593974,21.3634927480229,21.6862554524854,24.1755468027709,11.6846523125049,15.561939590978,12.9441827615339,27.881181440103,41.8149556151607,37.1935527721165,38.0827983070738,38.5965449463575,46.7104560469522,36.6771915320692,33.0646731474309,29.5157608341785,33.9342200784951,0.296452627087149,11.8460025058427,8.64859578498093,3.82265591054251,3.44862206360455,2.894125917029,4.07401362850272,4.02774592431135,2.7562988551756,2.74561413188081,18.6898668485561,5.58211421502755,5.61667811606209,3.03094653536534,1.79397413521912,0.964887042726734,27.7129785249907,48.3203100014736,40.7412441105065,32.7608015546113,40.3667227056224,48.5768146581266,51.179382790493,55.4179559916149,52.807773275574,45.4002613779989,57.4037167166954,27.8567635016755,30.2198718265317,25.0242871346015,0,0,18.1952781017043,23.4546234359023,61.3303253753365,62.5910406402365,62.4592141885133,26.7619182836635,91.1818754112982,92.5339823983033,110.943049832391,70.0178578000977,78.8707306251675,100.209091899247,105.655593137147,112.226249437944,122.143923385476,57.8378369559253,67.1376603035111,28.4904965867608,40.8846267977476,53.285349720129,5.30980553359851,48.7989078671513,38.6974152914881,29.2337873621642,32.1879063240042,41.8111801203741,40.8316703205789,32.7180356529755,27.8067955140083,24.3348303610578,18.9753495434998,26.8152412445286,76.2584716888485,57.9796722780819,40.3599093402194,56.799314283372,51.7833482235439,49.9432689285798,47.0610198922066,26.1839856238555,39.659518662767,30.7156502752539,69.245916989258,37.7589519235989,71.6902054529821,48.5519045671655,33.5436286648813,36.9317024426388,15.1570035047522,71.3887412740462,2.39219233116994,20.0195261924326,7.40778109478847,2.0720530270516,2.46049609897845,3.20289442489132,0.339956859987711,0,0.276399947608848,22.9120948323627,49.1902470018665,54.0829782557418,50.9785208678902,52.4811622996316,46.0745009504435,54.0806029003131,60.0064088565939,42.6662185433968,28.1264492043191,25.474911836564,19.1655599152625,49.7890098326449,40.5373301619889,51.9184672878607,38.2313077494084,36.4945231060081,43.891607253512,62.2376959554081,78.8542270081346,37.4455387280309,26.7867905819815,11.3764003426144,35.6796378910689,33.5864829928985,24.2951938968477,18.2607229580831,11.5235185773134,9.85602686063745,8.56599257612548,6.25991989678515,4.57240839929999,4.2346997757473,6.43222012882366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| |||
|short_description=p1@Enah | |||
}} |
Revision as of 19:58, 13 September 2013
Short description: | p1@Enah |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Enah_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000078719, ENSMUST00000111024, ENSMUST00000111025, ENSMUST00000111030, NM_001083120, NM_001083121, NM_008680, NM_010135, uc007dxp.1, uc007dxq.1, uc007dxr.1, uc007dxs.1, uc007dxt.1_5end |
EntrezGene: | Enah |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.89e-13 | 33 |
neuronal stem cell | 7.89e-13 | 33 |
neuroblast | 7.89e-13 | 33 |
electrically signaling cell | 7.89e-13 | 33 |
ectodermal cell | 1.11e-09 | 44 |
neurectodermal cell | 1.11e-09 | 44 |
neural cell | 3.66e-09 | 43 |
electrically responsive cell | 4.37e-09 | 39 |
electrically active cell | 4.37e-09 | 39 |
autonomic neuron | 3.91e-07 | 9 |
CNS neuron (sensu Vertebrata) | 5.74e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.74e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.45e-13 | 73 |
ectoderm-derived structure | 5.77e-12 | 95 |
ectoderm | 5.77e-12 | 95 |
presumptive ectoderm | 5.77e-12 | 95 |
nervous system | 7.22e-12 | 75 |
structure with developmental contribution from neural crest | 2.64e-11 | 92 |
ecto-epithelium | 2.11e-09 | 73 |
neurectoderm | 6.39e-09 | 64 |
neural plate | 6.39e-09 | 64 |
presumptive neural plate | 6.39e-09 | 64 |
embryo | 6.40e-08 | 320 |
regional part of nervous system | 2.69e-07 | 54 |
autonomic nervous system | 3.91e-07 | 9 |
neural tube | 6.02e-07 | 52 |
neural rod | 6.02e-07 | 52 |
future spinal cord | 6.02e-07 | 52 |
neural keel | 6.02e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.