FFCP PHASE1:Mm9::chr1:180485828..180485847,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1426|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:180485828..180485847,+|id=chr1:180485828..180485847,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003103,4.60e-13,43;UBERON:0002113,4.95e-11,14;UBERON:0003918,4.95e-11,14;UBERON:0011143,4.95e-11,14;UBERON:0005095,4.95e-11,14;UBERON:0007687,4.95e-11,14;UBERON:0007100,1.52e-08,18;UBERON:0000948,1.52e-08,18;UBERON:0005498,1.52e-08,18;UBERON:0004140,1.52e-08,18;UBERON:0009881,1.52e-08,18;UBERON:0004141,1.52e-08,18;UBERON:0003084,1.52e-08,18;UBERON:0007005,1.52e-08,18;UBERON:0004139,1.52e-08,18;UBERON:0004291,1.52e-08,18;UBERON:0006554,1.78e-08,18;UBERON:0001008,5.29e-08,19;UBERON:0000489,3.41e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405017814995072,0,0,0.220868540951614,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.30559649555362,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,1.75668478206928,0.83778682725382,0,0,0,0,0.299581278809645,0,0.502617408451458,0,0,0,0,0.712875546952214,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.896796041993948,0.187403449119458,0.776110112217047,1.72454394346274,2.08016688184601,0.879755620819744,0,0.834141747676794,0,0,0.59710280045548,0,0,0,1.86413195281952,3.51789089971644,1.2604344302271,0.473489471170421,1.37734962223183,2.00547246753592,1.62773761325285,0.804820204198858,0.700592054203017,0.493679549740441,0.656669856316381,0,0,0,0,0.630869845692382,0.411618449517138,0,0,2.77274725695804,3.0190767341857,0.38660238396628,0.605050573870028,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,1.02823661348756,1.1270773567308,3.66572390121566,1.93952487167626,3.15611189506434,1.26473074248515,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.938760993154008,0,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.425820255624806,0,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.73260649706906,0.428736758158132,0,0,1.38097570952153,0,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0.207574695168353,1.59609949360412,0.682934423016537,1.21553358534147,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.37456602987953,0.0640251524048693,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0,0.685738504770831,0.70990322463735,0,0.581385666529314,0.188218760830661,0.25384382367503,0.548783918618318,0.789209134313529,0.271608227691724,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0,0.499621155875892,0,0,0,0,0|short_description=p@chr1:180485828..180485847,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1426 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:180485828..180485847,+ | |||
|id=chr1:180485828..180485847,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,4.60e-13,43;UBERON:0002113,4.95e-11,14;UBERON:0003918,4.95e-11,14;UBERON:0011143,4.95e-11,14;UBERON:0005095,4.95e-11,14;UBERON:0007687,4.95e-11,14;UBERON:0007100,1.52e-08,18;UBERON:0000948,1.52e-08,18;UBERON:0005498,1.52e-08,18;UBERON:0004140,1.52e-08,18;UBERON:0009881,1.52e-08,18;UBERON:0004141,1.52e-08,18;UBERON:0003084,1.52e-08,18;UBERON:0007005,1.52e-08,18;UBERON:0004139,1.52e-08,18;UBERON:0004291,1.52e-08,18;UBERON:0006554,1.78e-08,18;UBERON:0001008,5.29e-08,19;UBERON:0000489,3.41e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405017814995072,0,0,0.220868540951614,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.30559649555362,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,1.75668478206928,0.83778682725382,0,0,0,0,0.299581278809645,0,0.502617408451458,0,0,0,0,0.712875546952214,0.124406970610093,0,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.896796041993948,0.187403449119458,0.776110112217047,1.72454394346274,2.08016688184601,0.879755620819744,0,0.834141747676794,0,0,0.59710280045548,0,0,0,1.86413195281952,3.51789089971644,1.2604344302271,0.473489471170421,1.37734962223183,2.00547246753592,1.62773761325285,0.804820204198858,0.700592054203017,0.493679549740441,0.656669856316381,0,0,0,0,0.630869845692382,0.411618449517138,0,0,2.77274725695804,3.0190767341857,0.38660238396628,0.605050573870028,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0.189667900953082,1.02823661348756,1.1270773567308,3.66572390121566,1.93952487167626,3.15611189506434,1.26473074248515,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.938760993154008,0,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.425820255624806,0,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0,0.492422699235184,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.73260649706906,0.428736758158132,0,0,1.38097570952153,0,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0.207574695168353,1.59609949360412,0.682934423016537,1.21553358534147,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.37456602987953,0.0640251524048693,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0,0.685738504770831,0.70990322463735,0,0.581385666529314,0.188218760830661,0.25384382367503,0.548783918618318,0.789209134313529,0.271608227691724,0,0.474540072496697,0.394017929502254,0,0.154936841185966,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p@chr1:180485828..180485847,+ | |||
}} |
Revision as of 19:53, 13 September 2013
Short description: | p@chr1:180485828..180485847, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:180485828..180485847, + |
Coexpression cluster: | MCL_coexpression_mm9:1426 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 4.60e-13 | 43 |
kidney | 4.95e-11 | 14 |
kidney mesenchyme | 4.95e-11 | 14 |
upper urinary tract | 4.95e-11 | 14 |
kidney rudiment | 4.95e-11 | 14 |
kidney field | 4.95e-11 | 14 |
primary circulatory organ | 1.52e-08 | 18 |
heart | 1.52e-08 | 18 |
primitive heart tube | 1.52e-08 | 18 |
primary heart field | 1.52e-08 | 18 |
anterior lateral plate mesoderm | 1.52e-08 | 18 |
heart tube | 1.52e-08 | 18 |
heart primordium | 1.52e-08 | 18 |
cardiac mesoderm | 1.52e-08 | 18 |
cardiogenic plate | 1.52e-08 | 18 |
heart rudiment | 1.52e-08 | 18 |
urinary system structure | 1.78e-08 | 18 |
renal system | 5.29e-08 | 19 |
cavitated compound organ | 3.41e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.