Personal tools

FFCP PHASE1:Mm9::chr1:175263635..175263651,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=13349|HGNC=|MCL_coexpression_id=15|UniProt=Q9QUI6,Q7TSL2|association_with_transcript=-1bp_to_ENSMUST00000038227,NM_010045,uc007drg.1_5end|description=CAGE_peak_1_at_Darc_5end|id=chr1:175263635..175263651,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!4.30e-08!25;UBERON:0002330!4.30e-08!25;UBERON:0009854!9.05e-08!23;UBERON:0009856!9.05e-08!23;UBERON:0002107!2.96e-07!22;UBERON:0007499!2.96e-07!22;UBERON:0006925!2.96e-07!22;UBERON:0009497!2.96e-07!22;UBERON:0000015!2.96e-07!22;UBERON:0002423!2.96e-07!22;UBERON:0006235!2.96e-07!22;UBERON:0008835!2.96e-07!22;UBERON:0003894!2.96e-07!22;UBERON:0004161!2.96e-07!22;UBERON:0008836!2.96e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0009854,9.68e-11,23;UBERON:0009856,9.68e-11,23;UBERON:0002365,1.39e-10,25;UBERON:0002330,1.39e-10,25;UBERON:0002107,6.44e-10,22;UBERON:0007499,6.44e-10,22;UBERON:0006925,6.44e-10,22;UBERON:0009497,6.44e-10,22;UBERON:0000015,6.44e-10,22;UBERON:0002423,6.44e-10,22;UBERON:0006235,6.44e-10,22;UBERON:0008835,6.44e-10,22;UBERON:0003894,6.44e-10,22;UBERON:0004161,6.44e-10,22;UBERON:0008836,6.44e-10,22;UBERON:0007023,2.93e-08,51;UBERON:0005172,1.20e-07,49;UBERON:0005173,1.20e-07,49;UBERON:0002417,1.20e-07,49;UBERON:0000916,1.20e-07,49;UBERON:0005256,1.74e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3297561890506,11.5410902412201,11.8925519281785,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,7.62036808151557,6.1506478758457,0,0,0,0,0.837063261473815,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71920063963254,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.856952953211411,0,0.244981598429908,0,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,1.47314292736834,0.427115042397309,0,0.227178579999552,0.151143120213571,23.4790235848359,10.3250865237766,0.679971333707751,0,0,0.448026887097336,4.49422144421606,0,0,0,0,0,0,0,0,0,0,2.16949371466214,10.616453229534,0.593768556259299,0,1.82679286987285,0.922461989024234,0.60289056221049,0.23517741427141,0.502666365318702,0,2.02439099687876,8.84610551949874,0.647067399789637,6.40440403535141,7.75800405016355,3.72783522436244,0.878342391034642,0.628340120440365,1.78819938646014,0,0,0,3.59497534571574,4.57500602818627,0.125654352112864,2.9550134432687,1.53429274398198,0,0.486723789203273,0,7.58882520721567,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0,0.60281927134286,0,0,0,0,0.646703978798527,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.540186184383045,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.292399974850665,1.09775057645525,0.268412837520744,0.841159794256509,0.308713837137853,0,5.28901133327089,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0.570676878337677,1.89811624617805,0.164698954724011,0,0.198956472041151,0.19496408711912,0.898819408654221,3.24207074812041,1.7922714592893,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,1.77871576252289,6.17326891149548,11.2038627214526,10.3436571697033,11.9687471619217,15.9176925436595,14.5136735515409,6.04161888646702,1.13494658742525,3.0201755450689,1.43768206527355,1.11642284300551,0.624075346229121,1.01031551178845,1.4351793081753,0,0.369506380333209,0,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0.491764273019036,3.03530420935206,0.642202359951168,1.40654023910644,0,6.5642441073137,0,0,0,0,0,0,0,0,0,1.28528526568723,1.56134093729095,0.35613120733451,0.651547837414304,2.8044920905331,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.775284879504663,0,0,1.26414703174326,1.05418608574999,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0,1.98475558249466,2.63818004706368,0.322928853391811,0.542816324353403,0.954978752025092,1.47726809770555,0.291480836629851,1.11255181206306,10.9357363710626,0.619160603889667,4.07427960213366,7.34636982318295,7.10809984149331,8.69357058184786,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,2.09404753587224,4.92536898508813,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0.576060012515731,1.89606672376907,0,0.102710957164827,0,0,0.198681354781265,0.600977247599844,0.590758108698309,1.11063094942962,0.381034033274999,0.302478555410522,1.07203668813728,0.384847366561318,0.701261413089414,1.58711268530648,0,0,0,2.89784391048286,1.31377732815827,0.915758121336325,3.85863082342319,3.51100472824754,0,0,1.14579102687879,1.3748254587495,0,0,0,0,1.35942722695261,0,0,1.19707462020309,1.19513524027894,1.21553358534147,0.209613162627982,1.10306105070008,0.888986911206461,0.412070114477788,0,0.252697211763798,1.01391719956096,1.13175804831646,0.561849044819294,0.89635213366817,1.14870937911227,0.476293691283074,0.695305955669133,1.15745532278223,1.23625770240992,0.588795680537589,1.71434626192708,0.887379030796687,0.953744759789284,0.726732083161643,1.31753132581463,0.676916863133412,0.548783918618318,0.526139422875686,0.543216455383447,1.12228454331548,1.06771516311757,0.394017929502254,0.818462086339379,0.464810523557898,0.771626443924566,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,1.10295709559758,2.78241402744506|short_description=p1@Darc}}
|EntrezGene=13349
|HGNC=
|MCL_coexpression_id=15
|UniProt=Q9QUI6,Q7TSL2
|association_with_transcript=-1bp_to_ENSMUST00000038227,NM_010045,uc007drg.1_5end
|description=CAGE_peak_1_at_Darc_5end
|id=chr1:175263635..175263651,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!4.30e-08!25;UBERON:0002330!4.30e-08!25;UBERON:0009854!9.05e-08!23;UBERON:0009856!9.05e-08!23;UBERON:0002107!2.96e-07!22;UBERON:0007499!2.96e-07!22;UBERON:0006925!2.96e-07!22;UBERON:0009497!2.96e-07!22;UBERON:0000015!2.96e-07!22;UBERON:0002423!2.96e-07!22;UBERON:0006235!2.96e-07!22;UBERON:0008835!2.96e-07!22;UBERON:0003894!2.96e-07!22;UBERON:0004161!2.96e-07!22;UBERON:0008836!2.96e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0009854,9.68e-11,23;UBERON:0009856,9.68e-11,23;UBERON:0002365,1.39e-10,25;UBERON:0002330,1.39e-10,25;UBERON:0002107,6.44e-10,22;UBERON:0007499,6.44e-10,22;UBERON:0006925,6.44e-10,22;UBERON:0009497,6.44e-10,22;UBERON:0000015,6.44e-10,22;UBERON:0002423,6.44e-10,22;UBERON:0006235,6.44e-10,22;UBERON:0008835,6.44e-10,22;UBERON:0003894,6.44e-10,22;UBERON:0004161,6.44e-10,22;UBERON:0008836,6.44e-10,22;UBERON:0007023,2.93e-08,51;UBERON:0005172,1.20e-07,49;UBERON:0005173,1.20e-07,49;UBERON:0002417,1.20e-07,49;UBERON:0000916,1.20e-07,49;UBERON:0005256,1.74e-07,45
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3297561890506,11.5410902412201,11.8925519281785,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,7.62036808151557,6.1506478758457,0,0,0,0,0.837063261473815,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71920063963254,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.856952953211411,0,0.244981598429908,0,0,0,0,0,0.263772575460388,0.182975287204819,0,0,0,0.15279824777681,1.47314292736834,0.427115042397309,0,0.227178579999552,0.151143120213571,23.4790235848359,10.3250865237766,0.679971333707751,0,0,0.448026887097336,4.49422144421606,0,0,0,0,0,0,0,0,0,0,2.16949371466214,10.616453229534,0.593768556259299,0,1.82679286987285,0.922461989024234,0.60289056221049,0.23517741427141,0.502666365318702,0,2.02439099687876,8.84610551949874,0.647067399789637,6.40440403535141,7.75800405016355,3.72783522436244,0.878342391034642,0.628340120440365,1.78819938646014,0,0,0,3.59497534571574,4.57500602818627,0.125654352112864,2.9550134432687,1.53429274398198,0,0.486723789203273,0,7.58882520721567,0.758168275301024,0.210441855886474,0.390361328888111,0.229902104433473,0,0.60281927134286,0,0,0,0,0.646703978798527,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.540186184383045,0,0.196764231747404,0,0,0,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.292399974850665,1.09775057645525,0.268412837520744,0.841159794256509,0.308713837137853,0,5.28901133327089,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0.570676878337677,1.89811624617805,0.164698954724011,0,0.198956472041151,0.19496408711912,0.898819408654221,3.24207074812041,1.7922714592893,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,1.77871576252289,6.17326891149548,11.2038627214526,10.3436571697033,11.9687471619217,15.9176925436595,14.5136735515409,6.04161888646702,1.13494658742525,3.0201755450689,1.43768206527355,1.11642284300551,0.624075346229121,1.01031551178845,1.4351793081753,0,0.369506380333209,0,0.162964976442026,0,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0.491764273019036,3.03530420935206,0.642202359951168,1.40654023910644,0,6.5642441073137,0,0,0,0,0,0,0,0,0,1.28528526568723,1.56134093729095,0.35613120733451,0.651547837414304,2.8044920905331,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0.775284879504663,0,0,1.26414703174326,1.05418608574999,0,0,0,0.129358683782755,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0,0,1.98475558249466,2.63818004706368,0.322928853391811,0.542816324353403,0.954978752025092,1.47726809770555,0.291480836629851,1.11255181206306,10.9357363710626,0.619160603889667,4.07427960213366,7.34636982318295,7.10809984149331,8.69357058184786,0,0,0,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,2.09404753587224,4.92536898508813,1.24267862617385,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0.576060012515731,1.89606672376907,0,0.102710957164827,0,0,0.198681354781265,0.600977247599844,0.590758108698309,1.11063094942962,0.381034033274999,0.302478555410522,1.07203668813728,0.384847366561318,0.701261413089414,1.58711268530648,0,0,0,2.89784391048286,1.31377732815827,0.915758121336325,3.85863082342319,3.51100472824754,0,0,1.14579102687879,1.3748254587495,0,0,0,0,1.35942722695261,0,0,1.19707462020309,1.19513524027894,1.21553358534147,0.209613162627982,1.10306105070008,0.888986911206461,0.412070114477788,0,0.252697211763798,1.01391719956096,1.13175804831646,0.561849044819294,0.89635213366817,1.14870937911227,0.476293691283074,0.695305955669133,1.15745532278223,1.23625770240992,0.588795680537589,1.71434626192708,0.887379030796687,0.953744759789284,0.726732083161643,1.31753132581463,0.676916863133412,0.548783918618318,0.526139422875686,0.543216455383447,1.12228454331548,1.06771516311757,0.394017929502254,0.818462086339379,0.464810523557898,0.771626443924566,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,1.10295709559758,2.78241402744506
|short_description=p1@Darc
}}

Revision as of 19:48, 13 September 2013

Short description:p1@Darc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Darc_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: -1bp_to_ENSMUST00000038227, NM_010045, uc007drg.1_5end
EntrezGene:Darc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Darc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.54
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.59
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H611.20
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D711.97
liver, embryo E16.CNhs10523.462-17F515.92
liver, embryo E17.CNhs10510.481-18A314.51
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G210.94
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H17.11
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.11
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum9.68e-1123
sac9.68e-1123
exocrine gland1.39e-1025
exocrine system1.39e-1025
liver6.44e-1022
epithelial sac6.44e-1022
digestive gland6.44e-1022
epithelium of foregut-midgut junction6.44e-1022
anatomical boundary6.44e-1022
hepatobiliary system6.44e-1022
foregut-midgut junction6.44e-1022
hepatic diverticulum6.44e-1022
liver primordium6.44e-1022
septum transversum6.44e-1022
liver bud6.44e-1022
adult organism2.93e-0851
abdomen element1.20e-0749
abdominal segment element1.20e-0749
abdominal segment of trunk1.20e-0749
abdomen1.20e-0749
trunk mesenchyme1.74e-0745







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:175263635..175263651,-&oldid=2968044"