FFCP PHASE1:Hg19::chr6:26402517..26402535,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11119|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1138|TSSclassifier=S|UniProt=E9PGB4|association_with_transcript=0bp_to_ENST00000082468,ENST00000414912_5end|coexpression_cluster_id=C3828|description=CAGE_peak_2_at_BTN3A1_5end|id=chr6:26402517..26402535,+|ontology_enrichment_celltype=CL:0000738!5.62e-16!140;CL:0002087!2.13e-13!119;CL:0000791!7.17e-11!18;CL:0000789!7.17e-11!18;CL:0002420!7.17e-11!18;CL:0002419!7.17e-11!18;CL:0000790!7.17e-11!18;CL:0002031!1.00e-10!124;CL:0000838!8.21e-09!52;CL:0000542!1.11e-08!53;CL:0000051!1.11e-08!53;CL:0000625!2.92e-08!11;CL:0000766!1.25e-07!76|ontology_enrichment_celltype_v019=CL:0000791;1.08e-11;18!CL:0000789;1.08e-11;18!CL:0002419;1.08e-11;18!CL:0000625;7.95e-09;11!CL:0000084;6.00e-07;25|ontology_enrichment_celltype_v019_2=CL:0000738,7.98e-17,136;CL:0002087,4.09e-14,115;CL:0002031,1.66e-11,120;CL:0000791,1.74e-11,18;CL:0000789,1.74e-11,18;CL:0002420,1.74e-11,18;CL:0002419,1.74e-11,18;CL:0000790,1.74e-11,18;CL:0000838,2.44e-09,52;CL:0000542,3.38e-09,53;CL:0000051,3.38e-09,53;CL:0000625,1.05e-08,11;CL:0000766,6.23e-08,72;CL:0000037,4.12e-07,168;CL:0000084,7.31e-07,25;CL:0000827,7.31e-07,25|ontology_enrichment_development_v019=CL:0000790;1.08e-11;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.09e-10!112;UBERON:0002390!1.33e-09!102;UBERON:0003061!1.33e-09!102;UBERON:0000178!5.29e-07!15;UBERON:0000179!5.29e-07!15;UBERON:0000463!5.29e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;4.90e-07;15!UBERON:0000179;4.90e-07;15!UBERON:0000463;4.90e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-10,108;UBERON:0002390,3.08e-10,98;UBERON:0003061,3.08e-10,98;UBERON:0000178,3.12e-07,15;UBERON:0000179,3.12e-07,15;UBERON:0000463,3.12e-07,15|phase1_expression=2.72517568905835,1.2846031433459,3.66481450649525,0,0.893922188854576,0,2.53299878168311,0.631719873426831,0.522371256399677,0.737201809504527,0.697801167972428,0.436882744260345,0.263766978228454,1.60896258848061,0.331397375727916,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,1.35433163884467,0.612002073732759,1.25381888591235,1.43117993565528,1.09499540058307,0.502170558379211,2.06316195519468,2.38091709404843,1.65292640758726,3.93364276848904,6.90892916574983,3.09632246632152,0.919421224478927,0.6024118375565,0.369754010166788,1.31694240986513,1.13735385989937,2.93600439334847,6.64794490238253,3.00816671205213,4.77423915574874,6.04571780447796,6.80176698639857,7.98484259665978,3.34415949192999,1.13362783106643,1.69808842831471,3.95129362739664,0.411167888021826,1.85823822537062,3.45230870786581,2.81776777182011,3.31075121844019,5.5159308917859,2.5819387343353,2.70852973188684,3.20011977222428,0.818718450173537,0.898893937780338,4.28517449319264,0.962787081228281,0.639337125799041,3.95821560224059,1.99463657621632,1.27867425159808,1.45104619314292,0.56738522469114,1.24564449799115,2.76373531782418,1.0429658368404,1.52032191293582,1.81619850790011,1.47311054395026,1.89877432464531,6.12640330304631,5.74031609905618,3.98351426465914,8.53697596713363,5.70672192797724,5.30394436100364,8.55038231223746,3.38158351238453,6.02791707423292,5.27988733383968,6.55366333514558,4.44754626931777,8.53460445133014,5.20514783146816,3.4485146397269,6.61044872784862,1.90810750907073,2.84606484554724,2.34894875748376,2.6759125968766,3.96513985737078,2.80254281490768,0.790152254325231,9.63877873557782,4.32311839024081,3.08402248499264,5.3499678525017,10.1035902656413,6.62826928028627,13.6378709885538,8.35578426638802,10.0166008541445,6.86755073209225,10.5613506868356,4.73937882984998,5.72261129263464,4.76869923350661,6.07970039128866,4.05724320029073,14.2355100635578,6.95606153033254,5.22677619024884,5.21222976408804,15.3288197440768,10.6524508099615,11.3858861408776,14.6540090589084,11.7195021694155,10.4549724889321,12.1965846452996,13.8225540046772,9.99445812418767,14.443412374685,7.39015197228942,7.25784275609037,6.41856469880418,9.70323506014753,2.43806866313962,2.01210257911091,1.2786256184353,1.44575660953827,0,1.15877215168659,0.795285947051099,1.94653948121054,1.41802225746102,0.665188192387692,1.40535657109002,3.99486180268024,0.364295288292542,0,1.29818957461873,2.96020553408754,0.930705723632056,2.14641561874808,2.28797964312051,1.11437250398869,0,0,0.694281003215189,0,0,0.275118041940067,0.208994966536811,0.516833518338658,1.42306505074684,0.33472061276467,1.61131726843659,0.760272105718513,0.488124115096339,0.735326160691737,0,3.66128885964727,2.91888184414021,0.675668882899933,0,0,0.366403487860815,9.22462922052443,7.75560528296651,0.872188104285069,3.47880366186723,1.13967460498122,3.17782033951725,3.44203944898576,1.41867352879343,0.560677600142307,0,1.72667283892012,1.8672662123986,1.21239604862719,0.980771418680752,2.8757911252537,0,0.234321431833797,0.312160076830321,1.1409436430889,0.298897361103602,0.587172493218824,0.6474917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9,2.5359343655004,0.509781344063451,7.98863302828755,5.86566780559552,2.49852889812322,3.03541695629618,0.705789743431384,1.44434460040503,0.730336388246517,1.37618785021362,0.860037498908708,0.315543124386369,0.951880862672806,2.61810414204226,2.645134202577,7.81189538150178,3.23522940041993,1.29787968637137,0,0.437062287854782,0,0,0,0,0,1.51557396436479,1.60778478093707,0.829169439458779,1.44806194206653,3.62497769231668,1.42838658878244,2.26061184426021,3.47618400056804,1.79410980128981,2.60953348940476,1.41482032270754,2.61260097476354,1.02669990325584,5.388164241167,2.15166616178029,1.66330178273007,0.976839223331694,8.21800563258409,0,1.88632924423832,2.34640942403454,6.72327943005765,3.66206560484165,1.99727032255654,4.6292972525936,1.60284246151616|short_description=p2@BTN3A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=11119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1138 | |||
|TSSclassifier=S | |||
|UniProt=E9PGB4 | |||
|association_with_transcript=0bp_to_ENST00000082468,ENST00000414912_5end | |||
|coexpression_cluster_id=C3828 | |||
|description=CAGE_peak_2_at_BTN3A1_5end | |||
|id=chr6:26402517..26402535,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.62e-16!140;CL:0002087!2.13e-13!119;CL:0000791!7.17e-11!18;CL:0000789!7.17e-11!18;CL:0002420!7.17e-11!18;CL:0002419!7.17e-11!18;CL:0000790!7.17e-11!18;CL:0002031!1.00e-10!124;CL:0000838!8.21e-09!52;CL:0000542!1.11e-08!53;CL:0000051!1.11e-08!53;CL:0000625!2.92e-08!11;CL:0000766!1.25e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.08e-11;18!CL:0000789;1.08e-11;18!CL:0002419;1.08e-11;18!CL:0000625;7.95e-09;11!CL:0000084;6.00e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.98e-17,136;CL:0002087,4.09e-14,115;CL:0002031,1.66e-11,120;CL:0000791,1.74e-11,18;CL:0000789,1.74e-11,18;CL:0002420,1.74e-11,18;CL:0002419,1.74e-11,18;CL:0000790,1.74e-11,18;CL:0000838,2.44e-09,52;CL:0000542,3.38e-09,53;CL:0000051,3.38e-09,53;CL:0000625,1.05e-08,11;CL:0000766,6.23e-08,72;CL:0000037,4.12e-07,168;CL:0000084,7.31e-07,25;CL:0000827,7.31e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.08e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.09e-10!112;UBERON:0002390!1.33e-09!102;UBERON:0003061!1.33e-09!102;UBERON:0000178!5.29e-07!15;UBERON:0000179!5.29e-07!15;UBERON:0000463!5.29e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.90e-07;15!UBERON:0000179;4.90e-07;15!UBERON:0000463;4.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.35e-10,108;UBERON:0002390,3.08e-10,98;UBERON:0003061,3.08e-10,98;UBERON:0000178,3.12e-07,15;UBERON:0000179,3.12e-07,15;UBERON:0000463,3.12e-07,15 | |||
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| |||
|short_description=p2@BTN3A1 | |||
}} |
Revision as of 19:47, 13 September 2013
Short description: | p2@BTN3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BTN3A1_5end |
Coexpression cluster: | C3828_Neutrophils_Whole_Eosinophils_CD8_CD4_Natural_small |
Association with transcript: | 0bp_to_ENST00000082468, ENST00000414912_5end |
EntrezGene: | BTN3A1 |
HGNC: | 1138 |
UniProt: | E9PGB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.98e-17 | 136 |
nongranular leukocyte | 4.09e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.66e-11 | 120 |
mature alpha-beta T cell | 1.74e-11 | 18 |
alpha-beta T cell | 1.74e-11 | 18 |
immature T cell | 1.74e-11 | 18 |
mature T cell | 1.74e-11 | 18 |
immature alpha-beta T cell | 1.74e-11 | 18 |
lymphoid lineage restricted progenitor cell | 2.44e-09 | 52 |
lymphocyte | 3.38e-09 | 53 |
common lymphoid progenitor | 3.38e-09 | 53 |
CD8-positive, alpha-beta T cell | 1.05e-08 | 11 |
myeloid leukocyte | 6.23e-08 | 72 |
hematopoietic stem cell | 4.12e-07 | 168 |
T cell | 7.31e-07 | 25 |
pro-T cell | 7.31e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.35e-10 | 108 |
hematopoietic system | 3.08e-10 | 98 |
blood island | 3.08e-10 | 98 |
blood | 3.12e-07 | 15 |
haemolymphatic fluid | 3.12e-07 | 15 |
organism substance | 3.12e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.