FFCP PHASE1:Hg19::chr6:26235206..26235224,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3007 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4717 | |||
|TSSclassifier=W | |||
|UniProt=P16402 | |||
|association_with_transcript=0bp_to_ENST00000244534,NM_005320,uc003nhd.2_5end | |||
|coexpression_cluster_id=C241 | |||
|description=CAGE_peak_1_at_HIST1H1D_5end | |||
|id=chr6:26235206..26235224,- | |||
|ontology_enrichment_celltype=CL:0000542!4.43e-19!53;CL:0000051!4.43e-19!53;CL:0000838!1.23e-18!52;CL:0000084!4.66e-11!25;CL:0000827!4.66e-11!25;CL:0000791!3.43e-08!18;CL:0000789!3.43e-08!18;CL:0002420!3.43e-08!18;CL:0002419!3.43e-08!18;CL:0000790!3.43e-08!18;CL:0000945!3.76e-08!24;CL:0000826!3.76e-08!24;CL:0000988!2.91e-07!182;CL:0000236!3.36e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.24e-11;53!CL:0000084;4.72e-11;25!CL:0000791;3.45e-08;18!CL:0000789;3.45e-08;18!CL:0002419;3.45e-08;18!CL:0000945;3.68e-08;24!CL:0000236;8.57e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.43e-19,53;CL:0000051,4.43e-19,53;CL:0000838,1.23e-18,52;CL:0000084,4.66e-11,25;CL:0000827,4.66e-11,25;CL:0000988,1.54e-08,177;CL:0000791,3.43e-08,18;CL:0000789,3.43e-08,18;CL:0002420,3.43e-08,18;CL:0002419,3.43e-08,18;CL:0000790,3.43e-08,18;CL:0000945,3.76e-08,24;CL:0000826,3.76e-08,24;CL:0000037,5.37e-08,168;CL:0000236,3.36e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;4.24e-11;53!CL:0000790;3.45e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!2.00e-10!51;DOID:0060083!2.00e-10!51;DOID:1240!3.04e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.74e-07;39!DOID:2531;4.69e-07;51!DOID:0060083;4.69e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.06e-10,51;DOID:0060083,2.06e-10,51;DOID:1240,3.07e-09,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@HIST1H1D | |||
}} |
Revision as of 19:46, 13 September 2013
Short description: | p1@HIST1H1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HIST1H1D_5end |
Coexpression cluster: | C241_Reticulocytes_chronic_Tracheal_Hodgkin_Endothelial_Hair_thymus |
Association with transcript: | 0bp_to_ENST00000244534, NM_005320, uc003nhd.2_5end |
EntrezGene: | HIST1H1D |
HGNC: | 4717 |
UniProt: | P16402 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.43e-19 | 53 |
common lymphoid progenitor | 4.43e-19 | 53 |
lymphoid lineage restricted progenitor cell | 1.23e-18 | 52 |
T cell | 4.66e-11 | 25 |
pro-T cell | 4.66e-11 | 25 |
hematopoietic cell | 1.54e-08 | 177 |
mature alpha-beta T cell | 3.43e-08 | 18 |
alpha-beta T cell | 3.43e-08 | 18 |
immature T cell | 3.43e-08 | 18 |
mature T cell | 3.43e-08 | 18 |
immature alpha-beta T cell | 3.43e-08 | 18 |
lymphocyte of B lineage | 3.76e-08 | 24 |
pro-B cell | 3.76e-08 | 24 |
hematopoietic stem cell | 5.37e-08 | 168 |
B cell | 3.36e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.06e-10 | 51 |
immune system cancer | 2.06e-10 | 51 |
leukemia | 3.07e-09 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.