FFCP PHASE1:Hg19::chr6:24178711..24178718,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C860|description=CAGE_peak_at_chr6:24178711..24178718,-|id=chr6:24178711..24178718,-|ontology_enrichment_celltype=CL:0000313!2.70e-08!1;CL:0000342!7.97e-08!1;CL:0002565!7.97e-08!1;CL:0002563!2.67e-07!4;CL:0000066!3.70e-07!254|ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2|ontology_enrichment_celltype_v019_2=CL:0000313,9.37e-99,1;CL:0000159,2.74e-50,2|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10|ontology_enrichment_disease=DOID:299!1.03e-15!25;DOID:4468!1.18e-14!2;DOID:0050687!1.70e-08!143;DOID:2152!2.70e-08!1|ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:4468;4.52e-50;2!DOID:299;4.64e-17;25!DOID:120;6.71e-16;27!DOID:193;6.74e-15;29!DOID:2394;1.86e-08;14|ontology_enrichment_disease_v019_2=DOID:2152,9.37e-99,1;DOID:4468,4.52e-50,2;DOID:299,4.64e-17,25;DOID:120,6.71e-16,27;DOID:193,6.74e-15,29;DOID:2394,1.86e-08,14|ontology_enrichment_uberon=UBERON:0004911!2.70e-08!1;UBERON:0003929!3.58e-08!54;UBERON:0000998!4.07e-08!1;UBERON:0006868!4.07e-08!1;UBERON:0005172!4.26e-08!55;UBERON:0005173!4.26e-08!55;UBERON:0002506!7.97e-08!1;UBERON:0001769!7.97e-08!1;UBERON:0001242!2.67e-07!4;UBERON:0001262!2.67e-07!4;UBERON:0004786!2.67e-07!4;UBERON:0004808!2.67e-07!4;UBERON:0001277!2.67e-07!4;UBERON:0002417!3.66e-07!61;UBERON:0000916!3.66e-07!61|ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0004909;2.74e-50;2!UBERON:0000992;5.28e-09;13|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.37e-99,1;UBERON:0004909,2.74e-50,2;UBERON:0000992,5.28e-09,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.26961417541674,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.706756583783524,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,2.12525320415805,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:24178711..24178718,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C860 | |||
|description=CAGE_peak_at_chr6:24178711..24178718,- | |||
|id=chr6:24178711..24178718,- | |||
|ontology_enrichment_celltype=CL:0000313!2.70e-08!1;CL:0000342!7.97e-08!1;CL:0002565!7.97e-08!1;CL:0002563!2.67e-07!4;CL:0000066!3.70e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.37e-99,1;CL:0000159,2.74e-50,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | |||
|ontology_enrichment_disease=DOID:299!1.03e-15!25;DOID:4468!1.18e-14!2;DOID:0050687!1.70e-08!143;DOID:2152!2.70e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:4468;4.52e-50;2!DOID:299;4.64e-17;25!DOID:120;6.71e-16;27!DOID:193;6.74e-15;29!DOID:2394;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.37e-99,1;DOID:4468,4.52e-50,2;DOID:299,4.64e-17,25;DOID:120,6.71e-16,27;DOID:193,6.74e-15,29;DOID:2394,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004911!2.70e-08!1;UBERON:0003929!3.58e-08!54;UBERON:0000998!4.07e-08!1;UBERON:0006868!4.07e-08!1;UBERON:0005172!4.26e-08!55;UBERON:0005173!4.26e-08!55;UBERON:0002506!7.97e-08!1;UBERON:0001769!7.97e-08!1;UBERON:0001242!2.67e-07!4;UBERON:0001262!2.67e-07!4;UBERON:0004786!2.67e-07!4;UBERON:0004808!2.67e-07!4;UBERON:0001277!2.67e-07!4;UBERON:0002417!3.66e-07!61;UBERON:0000916!3.66e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0004909;2.74e-50;2!UBERON:0000992;5.28e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.37e-99,1;UBERON:0004909,2.74e-50,2;UBERON:0000992,5.28e-09,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.26961417541674,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.706756583783524,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,2.12525320415805,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:24178711..24178718,- | |||
}} |
Revision as of 19:39, 13 September 2013
Short description: | p@chr6:24178711..24178718, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:24178711..24178718, - |
Coexpression cluster: | C860_serous_mesothelioma_Renal_clear_colon_endometrial_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.37e-99 | 1 |
seromucus secreting cell | 2.74e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.37e-99 | 1 |
epithelium of gonad | 2.74e-50 | 2 |
female gonad | 5.28e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.37e-99 | 1 |
clear cell adenocarcinoma | 4.52e-50 | 2 |
adenocarcinoma | 4.64e-17 | 25 |
female reproductive organ cancer | 6.71e-16 | 27 |
reproductive organ cancer | 6.74e-15 | 29 |
ovarian cancer | 1.86e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.