FFCP PHASE1:Hg19::chr6:20402608..20402629,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1871|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3115|TSSclassifier=W|UniProt=|association_with_transcript=144bp_to_BC156367,BC172526_5end|description=CAGE_peak_13_at_E2F3_5end|id=chr6:20402608..20402629,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1001319;7.47e-30;1!CL:1000600;7.47e-30;1!CL:0002262;1.91e-15;2!CL:1000398;1.91e-15;2|ontology_enrichment_celltype_v019_2=CL:1001319,7.48e-30,1;CL:1000600,7.48e-30,1;CL:0002262,1.54e-15,2;CL:1000398,1.54e-15,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!8.26e-18!239;DOID:162!8.54e-18!235;DOID:0050687!5.03e-11!143;DOID:305!2.18e-10!106;DOID:2531!1.10e-09!51;DOID:0060083!1.10e-09!51;DOID:0050686!1.17e-08!137;DOID:1240!1.30e-08!39;DOID:8692!1.08e-07!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004645;7.47e-30;1!UBERON:0001256;7.47e-30;1!UBERON:0001259;7.47e-30;1!UBERON:0005910;6.17e-20;6!UBERON:0001255;1.15e-15;2!UBERON:0001556;1.15e-15;2!UBERON:0001281;1.91e-15;2!UBERON:0003497;1.91e-15;2!UBERON:0003909;1.91e-15;2!UBERON:0003835;1.91e-15;2!UBERON:0001280;9.43e-11;3!UBERON:0004647;9.43e-11;3!UBERON:0000486;1.72e-10;12!UBERON:0000365;4.79e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.48e-30,1;UBERON:0001256,7.48e-30,1;UBERON:0001259,7.48e-30,1;UBERON:0005910,7.13e-20,6;UBERON:0001255,1.15e-15,2;UBERON:0001556,1.15e-15,2;UBERON:0001281,1.54e-15,2;UBERON:0003497,1.54e-15,2;UBERON:0003909,1.54e-15,2;UBERON:0003835,1.54e-15,2;UBERON:0001280,8.17e-11,3;UBERON:0004647,8.17e-11,3;UBERON:0005171,8.17e-11,3;UBERON:0000365,4.79e-07,5|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.492484232307152,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.305653622991805,0.328402357799783,0.157421562627358,0,0,0.464448369948228,0,0.30120591877825,0,0.154934401160603,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0,0.150176892841506,0,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0.328875809207352,0.829050053357545,0.869409257205157,0,0,0,0.566546713487831,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.539325232640658,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.402115889646523,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0.468008530278475,0.148631162288728,0,0,0,0.179117045405697,0,0.383382679165211,0,0.088048434013226,0,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0.462629081407967,0,0,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0.656029291399411,0,0,0.54941678891006,0.495056999523528,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0,0.185803175125719,0.865615277858669,0.284567373393656,0.159426272728822,0.997896857164083,0.766021480529467,0.423347165447766,0.324621940274555,1.12318871245384,0.456469358066384,0.313359791546046,0,0.338583555603207,0.481764225311099,0.403599414382095,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0.251932747854276,0.306806047506464,0.246169610922139,0.311039587661807,0,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0.689486746482929,0.583209226766509,0.520874984799877,0,0,0,0,0,0,0.435753854075961,0,0,0.227884111694002,0,0.538545866458633,0.54323685961004,0,0.183195186803725,0,0,0.784901281975124,0.332423363800313,0,0.392125068635479,0.503464760927528,0.189753732724185,0.476809736941136,0.210998064528027,0.979396848954886,0.282706142867882,0.432777279484182,0,0,0,0.296521128680622,0.370691816839509,0.313265848516366,0,0,0,0.729819156862664,0,0,0,0,0,0,1.50323419414493,0.622129148383483,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.34823682632161,0.17472666824203,0.171986032471617,0.483781656445426,0.584714536689484,0.410577285266046,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.343189995723929,0.576219191952599,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.337017719270924,0.295282444544246,0.0846733320657845,0,0,0.321506296930038,0.687697182986169,1.24632101408756,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.487170393523584,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.276697269872462,0,0.151649117541648,0.285465333544967,0.235265819698172,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0.260994291965212,0.453411851024545,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0.640150378164845,0,0,0,0.279759015438889,0,0,0,0,0.436838552768056,0.33946505990805,0,0.247871528518004,0,0,0.315446980005013,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0.346576998451015,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0.236387681767936,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0,0.294450700845729,0,0.647428837187895,0,0,0,0,0.596852325484105,0.594600453887843,0.11294608203896,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.631086248772738,0.135982980381829,0,0,0,0,0,0.252332849670158,0.327796715891087,0.253397002022874,0.203977659483963,0,0.459474497674225,0.752122617877125,0,0,0,0,0.213233981900981,0,0,0,0.448527450322454,0,0,0,0,0.0673520530145875,0,0,2.93051766999508,1.06727345877715,0,0,0,0,0,0,0,0.320568492303233|short_description=p13@E2F3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1871 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3115 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=144bp_to_BC156367,BC172526_5end | |||
|description=CAGE_peak_13_at_E2F3_5end | |||
|id=chr6:20402608..20402629,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;7.47e-30;1!CL:1000600;7.47e-30;1!CL:0002262;1.91e-15;2!CL:1000398;1.91e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,7.48e-30,1;CL:1000600,7.48e-30,1;CL:0002262,1.54e-15,2;CL:1000398,1.54e-15,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.26e-18!239;DOID:162!8.54e-18!235;DOID:0050687!5.03e-11!143;DOID:305!2.18e-10!106;DOID:2531!1.10e-09!51;DOID:0060083!1.10e-09!51;DOID:0050686!1.17e-08!137;DOID:1240!1.30e-08!39;DOID:8692!1.08e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.47e-30;1!UBERON:0001256;7.47e-30;1!UBERON:0001259;7.47e-30;1!UBERON:0005910;6.17e-20;6!UBERON:0001255;1.15e-15;2!UBERON:0001556;1.15e-15;2!UBERON:0001281;1.91e-15;2!UBERON:0003497;1.91e-15;2!UBERON:0003909;1.91e-15;2!UBERON:0003835;1.91e-15;2!UBERON:0001280;9.43e-11;3!UBERON:0004647;9.43e-11;3!UBERON:0000486;1.72e-10;12!UBERON:0000365;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.48e-30,1;UBERON:0001256,7.48e-30,1;UBERON:0001259,7.48e-30,1;UBERON:0005910,7.13e-20,6;UBERON:0001255,1.15e-15,2;UBERON:0001556,1.15e-15,2;UBERON:0001281,1.54e-15,2;UBERON:0003497,1.54e-15,2;UBERON:0003909,1.54e-15,2;UBERON:0003835,1.54e-15,2;UBERON:0001280,8.17e-11,3;UBERON:0004647,8.17e-11,3;UBERON:0005171,8.17e-11,3;UBERON:0000365,4.79e-07,5 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.492484232307152,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.305653622991805,0.328402357799783,0.157421562627358,0,0,0.464448369948228,0,0.30120591877825,0,0.154934401160603,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0,0.150176892841506,0,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0.328875809207352,0.829050053357545,0.869409257205157,0,0,0,0.566546713487831,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.539325232640658,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0.402115889646523,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0.468008530278475,0.148631162288728,0,0,0,0.179117045405697,0,0.383382679165211,0,0.088048434013226,0,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0.462629081407967,0,0,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0.656029291399411,0,0,0.54941678891006,0.495056999523528,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0,0.185803175125719,0.865615277858669,0.284567373393656,0.159426272728822,0.997896857164083,0.766021480529467,0.423347165447766,0.324621940274555,1.12318871245384,0.456469358066384,0.313359791546046,0,0.338583555603207,0.481764225311099,0.403599414382095,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0.251932747854276,0.306806047506464,0.246169610922139,0.311039587661807,0,0.358042349351218,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0.689486746482929,0.583209226766509,0.520874984799877,0,0,0,0,0,0,0.435753854075961,0,0,0.227884111694002,0,0.538545866458633,0.54323685961004,0,0.183195186803725,0,0,0.784901281975124,0.332423363800313,0,0.392125068635479,0.503464760927528,0.189753732724185,0.476809736941136,0.210998064528027,0.979396848954886,0.282706142867882,0.432777279484182,0,0,0,0.296521128680622,0.370691816839509,0.313265848516366,0,0,0,0.729819156862664,0,0,0,0,0,0,1.50323419414493,0.622129148383483,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.34823682632161,0.17472666824203,0.171986032471617,0.483781656445426,0.584714536689484,0.410577285266046,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0.343189995723929,0.576219191952599,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.337017719270924,0.295282444544246,0.0846733320657845,0,0,0.321506296930038,0.687697182986169,1.24632101408756,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.487170393523584,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.276697269872462,0,0.151649117541648,0.285465333544967,0.235265819698172,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0.260994291965212,0.453411851024545,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0.640150378164845,0,0,0,0.279759015438889,0,0,0,0,0.436838552768056,0.33946505990805,0,0.247871528518004,0,0,0.315446980005013,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0.346576998451015,0,0,0,0,0,0,0.261906694481422,0.327543835020193,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0.236387681767936,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0,0.294450700845729,0,0.647428837187895,0,0,0,0,0.596852325484105,0.594600453887843,0.11294608203896,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.631086248772738,0.135982980381829,0,0,0,0,0,0.252332849670158,0.327796715891087,0.253397002022874,0.203977659483963,0,0.459474497674225,0.752122617877125,0,0,0,0,0.213233981900981,0,0,0,0.448527450322454,0,0,0,0,0.0673520530145875,0,0,2.93051766999508,1.06727345877715,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p13@E2F3 | |||
}} |
Revision as of 19:34, 13 September 2013
Short description: | p13@E2F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_E2F3_5end |
Coexpression cluster: | NA |
Association with transcript: | 144bp_to_BC156367, BC172526_5end |
EntrezGene: | E2F3 |
HGNC: | 3115 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.48e-30 | 1 |
lower urinary tract cell | 7.48e-30 | 1 |
endothelial cell of sinusoid | 1.54e-15 | 2 |
endothelial cell of hepatic sinusoid | 1.54e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.48e-30 | 1 |
wall of urinary bladder | 7.48e-30 | 1 |
mucosa of urinary bladder | 7.48e-30 | 1 |
transitional epithelium | 7.13e-20 | 6 |
urinary bladder | 1.15e-15 | 2 |
lower urinary tract | 1.15e-15 | 2 |
hepatic sinusoid | 1.54e-15 | 2 |
abdomen blood vessel | 1.54e-15 | 2 |
sinusoid | 1.54e-15 | 2 |
abdominal segment blood vessel | 1.54e-15 | 2 |
liver parenchyma | 8.17e-11 | 3 |
liver lobule | 8.17e-11 | 3 |
hepatic duct | 8.17e-11 | 3 |
urothelium | 4.79e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.