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FFCP PHASE1:Mm9::chr1:154472254..154472268,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19731|HGNC=|MCL_coexpression_id=3238|UniProt=Q60695|association_with_transcript=-13bp_to_NM_016846,uc007czh.1_5end|description=CAGE_peak_3_at_Rgl1_5end|id=chr1:154472254..154472268,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!3.45e-09!33;UBERON:0009569!2.38e-08!66;UBERON:0000926!5.34e-08!193;UBERON:0004120!5.34e-08!193;UBERON:0006603!5.34e-08!193;UBERON:0003914!2.20e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.77e-09,33;UBERON:0009569,3.39e-09,66;UBERON:0003914,9.58e-08,47;UBERON:0007100,4.99e-07,18;UBERON:0000948,4.99e-07,18;UBERON:0005498,4.99e-07,18;UBERON:0004140,4.99e-07,18;UBERON:0009881,4.99e-07,18;UBERON:0004141,4.99e-07,18;UBERON:0003084,4.99e-07,18;UBERON:0007005,4.99e-07,18;UBERON:0004139,4.99e-07,18;UBERON:0004291,4.99e-07,18;UBERON:0005177,5.12e-07,79;UBERON:0004535,7.08e-07,23;UBERON:0001009,7.08e-07,23|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.422366166455,0.936258105287974,0,0.0797721589953364,0.171200729931206,0,1.33243904726265,0.202475267389826,1.39912375625629,0.946386496074713,1.91960207048034,0,1.78590909317247,1.58865521921416,2.08959831311148,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0.485510353031154,2.01434908760924,1.92616169317078,0.917733760808408,0.782391344348039,3.05235218932625,6.81027166476863,8.55491555926847,1.39986421625363,1.43752564364972,1.17447824240415,0.725362142011344,0.336093799142464,2.57259436035947,2.29226751951005,0,0,0.528990979272033,0,1.0165335962074,1.77858959222228,0.899899717281399,0,0.7104801149461,1.49800055259202,1.15265491596466,0.414758449233911,0.675029691658453,0.630974884054146,0.856952953211411,0.220868540951614,1.10241719293459,0.191690942036473,0,0,1.0214987046815,0.921639199537461,0,0.274462930807229,0,0.558365998002762,0.56276261003168,0.30559649555362,1.47314292736834,1.42371680799103,0.745597783301202,0.37863096666592,1.13357340160178,12.1743085254705,5.16254326188832,0.679971333707751,0,1.29955283489534,1.34408066129201,2.66844398250329,1.53387290320252,2.33807404142582,1.06001872353102,0.563373679106722,2.56652954828636,0,7.11066703153331,0.432982082022428,0,0,1.1418387971906,5.43769555659061,1.63286352971307,2.08182392119363,1.21786191324856,1.15307748628029,1.95939432718409,2.23418543557839,1.50799909595611,18.0452326446093,1.87979163995885,3.5384422077995,1.45590164952668,2.20841518460394,2.42437626567611,0,0.585561594023094,1.04723353406728,0.255457055208591,0.718890747035522,0,1.14363204365758,0.449371918214468,0.457500602818626,0.376963056338593,0.347648640384553,0.255715457330331,1.0389402227978,1.78465389374533,3.86989582631202,2.86136032403214,0,0.631325567659422,1.30120442962704,1.37941262660084,0.900310649026746,2.41127708537144,1.7009124787832,2.562274405697,2.06143794031403,1.03481348295606,1.29340795759705,1.51284864134255,1.58356011747554,2.19195732427575,1.94633074457919,2.78601733217733,1.23469281844766,2.58744546864041,0,0.51469581422943,0.852490498186778,3.52113813310353,2.11073453982987,4.32148947506436,1.89395788468168,4.13204886669548,3.5481435964097,3.48800917125612,5.36546802799238,4.78737903705395,3.62031669809657,2.62667942526552,3.32382119138008,3.65499968563331,3.07370161407471,3.62357330653004,0.630869845692382,0.720332286654991,0,0.528901133327089,1.06644125267617,3.25131340604614,1.80414445850931,3.42861991859682,3.7804267453628,2.28270751335071,1.42358718463353,3.95277491337626,3.51869292320377,3.18330355265841,2.53453313254856,0,1.29682829924817,0.995706366271836,1.51734320762465,2.97046132785295,4.50830942692322,1.62921062276251,3.29719228184964,4.76923575254166,6.00747102680444,5.16635517928608,6.90794402502049,9.87177311374404,2.66807364378434,1.00107063429656,1.96558995113203,0.899448449539415,2.43432145666204,2.17059443777175,2.80088436959562,1.15078454980324,2.10775794807546,3.56929837144506,0,5.20997326735905,5.30464044294753,4.54641980304801,2.33216637578486,2.8946611281802,2.03228509183265,1.70542270593436,4.07412441105065,2.8856664581782,2.58159273117352,1.67506257441816,2.38043640886014,3.31727201358258,3.15270288212382,3.76489972402917,8.13219320153184,3.76885623846197,3.62638461918381,3.90552458170081,0,0.54390568381871,0.983528546038072,1.65562047782839,0.321101179975584,1.17211686592203,1.80328439914343,2.7771801992481,1.89304931649754,1.56175497718655,1.29254038639679,2.15071918157297,3.34198011123591,4.24614796183249,4.85772842009873,2.04579100537918,1.58115111178609,0.963963949265421,1.27746076687442,2.31485284767432,4.72372182125371,1.48473110675282,0,0.971122544619926,0.604647113929502,0.754420319023592,1.18120757152309,1.53717573971964,1.80899805217755,2.18120237686503,1.42598951353889,1.26414703174326,0,1.03135543248187,1.02131881726136,1.44048875225048,1.4229455216103,2.7863814554107,0.532020700926821,1.96205699362278,2.63278432963394,1.522324745573,6.33613611772018,5.08396970073168,0.661585194164886,2.4732937941222,2.58343082713449,2.5934557719107,1.67121281604391,2.1338316966858,1.45740418314925,0.370850604021019,2.05045056957423,2.06386867963222,2.03713980106683,1.88368457004691,3.00727300986255,1.83022538565218,0.849892149969277,0.69975726161829,1.10559979043539,2.86401185404534,1.58167996790568,2.03319467126849,1.72808545314882,1.46361807210128,1.9652630737156,2.42755823492677,3.05817786183743,2.87931536182433,1.03691978633434,1.24267862617385,0.56369293868419,1.79419855252775,1.98550188548517,2.91676782516071,1.6790777052105,1.35164900392623,1.87771581833206,3.1249052362548,2.09718688851422,1.69108884578204,2.59227005632079,0.632022241256357,1.41907650703115,0.924398614483445,0.389762468933385,1.07416017400489,1.39076948346885,0.841368146639782,0.295379054349154,0.403865799792591,0.533447646584999,0.907435666231565,0.38983152295901,0.769694733122636,0.818138315270983,0.906921534460845,0.221985953374065,0,0,2.70465431645067,4.69206188627955,2.01466786693992,0.857473516316263,0,0.564751842617067,0.920650473014354,0,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0.453142408984205,1.55328093525546,0.518936737920883,1.19707462020309,1.36586884603307,1.70174701947806,2.93458427679175,2.75765262675021,1.55572709461131,1.85431551515005,0.962757628775446,2.02157769411038,2.5347929989024,1.69763707247469,2.71560371662659,2.62503124859964,2.23998328926892,4.28664322154766,2.43357084484197,1.92909220463705,2.88460130562315,2.94397840268795,1.02860775715625,1.06485483695602,1.90748951957857,1.45346416632329,2.4468438907986,2.19997980518359,1.82927972872773,1.31534855718921,1.7654534799962,0.561142271657738,2.72860541685601,2.36410757701352,2.45538625901814,1.54936841185966,0.771626443924566,0.749431733813838,1.63752125911786,1.93383948643468,1.53030665655075,3.52946270591225,1.15933917810211|short_description=p3@Rgl1}}
|EntrezGene=19731
|HGNC=
|MCL_coexpression_id=3238
|UniProt=Q60695
|association_with_transcript=-13bp_to_NM_016846,uc007czh.1_5end
|description=CAGE_peak_3_at_Rgl1_5end
|id=chr1:154472254..154472268,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004872!3.45e-09!33;UBERON:0009569!2.38e-08!66;UBERON:0000926!5.34e-08!193;UBERON:0004120!5.34e-08!193;UBERON:0006603!5.34e-08!193;UBERON:0003914!2.20e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.77e-09,33;UBERON:0009569,3.39e-09,66;UBERON:0003914,9.58e-08,47;UBERON:0007100,4.99e-07,18;UBERON:0000948,4.99e-07,18;UBERON:0005498,4.99e-07,18;UBERON:0004140,4.99e-07,18;UBERON:0009881,4.99e-07,18;UBERON:0004141,4.99e-07,18;UBERON:0003084,4.99e-07,18;UBERON:0007005,4.99e-07,18;UBERON:0004139,4.99e-07,18;UBERON:0004291,4.99e-07,18;UBERON:0005177,5.12e-07,79;UBERON:0004535,7.08e-07,23;UBERON:0001009,7.08e-07,23
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0.422366166455,0.936258105287974,0,0.0797721589953364,0.171200729931206,0,1.33243904726265,0.202475267389826,1.39912375625629,0.946386496074713,1.91960207048034,0,1.78590909317247,1.58865521921416,2.08959831311148,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0.485510353031154,2.01434908760924,1.92616169317078,0.917733760808408,0.782391344348039,3.05235218932625,6.81027166476863,8.55491555926847,1.39986421625363,1.43752564364972,1.17447824240415,0.725362142011344,0.336093799142464,2.57259436035947,2.29226751951005,0,0,0.528990979272033,0,1.0165335962074,1.77858959222228,0.899899717281399,0,0.7104801149461,1.49800055259202,1.15265491596466,0.414758449233911,0.675029691658453,0.630974884054146,0.856952953211411,0.220868540951614,1.10241719293459,0.191690942036473,0,0,1.0214987046815,0.921639199537461,0,0.274462930807229,0,0.558365998002762,0.56276261003168,0.30559649555362,1.47314292736834,1.42371680799103,0.745597783301202,0.37863096666592,1.13357340160178,12.1743085254705,5.16254326188832,0.679971333707751,0,1.29955283489534,1.34408066129201,2.66844398250329,1.53387290320252,2.33807404142582,1.06001872353102,0.563373679106722,2.56652954828636,0,7.11066703153331,0.432982082022428,0,0,1.1418387971906,5.43769555659061,1.63286352971307,2.08182392119363,1.21786191324856,1.15307748628029,1.95939432718409,2.23418543557839,1.50799909595611,18.0452326446093,1.87979163995885,3.5384422077995,1.45590164952668,2.20841518460394,2.42437626567611,0,0.585561594023094,1.04723353406728,0.255457055208591,0.718890747035522,0,1.14363204365758,0.449371918214468,0.457500602818626,0.376963056338593,0.347648640384553,0.255715457330331,1.0389402227978,1.78465389374533,3.86989582631202,2.86136032403214,0,0.631325567659422,1.30120442962704,1.37941262660084,0.900310649026746,2.41127708537144,1.7009124787832,2.562274405697,2.06143794031403,1.03481348295606,1.29340795759705,1.51284864134255,1.58356011747554,2.19195732427575,1.94633074457919,2.78601733217733,1.23469281844766,2.58744546864041,0,0.51469581422943,0.852490498186778,3.52113813310353,2.11073453982987,4.32148947506436,1.89395788468168,4.13204886669548,3.5481435964097,3.48800917125612,5.36546802799238,4.78737903705395,3.62031669809657,2.62667942526552,3.32382119138008,3.65499968563331,3.07370161407471,3.62357330653004,0.630869845692382,0.720332286654991,0,0.528901133327089,1.06644125267617,3.25131340604614,1.80414445850931,3.42861991859682,3.7804267453628,2.28270751335071,1.42358718463353,3.95277491337626,3.51869292320377,3.18330355265841,2.53453313254856,0,1.29682829924817,0.995706366271836,1.51734320762465,2.97046132785295,4.50830942692322,1.62921062276251,3.29719228184964,4.76923575254166,6.00747102680444,5.16635517928608,6.90794402502049,9.87177311374404,2.66807364378434,1.00107063429656,1.96558995113203,0.899448449539415,2.43432145666204,2.17059443777175,2.80088436959562,1.15078454980324,2.10775794807546,3.56929837144506,0,5.20997326735905,5.30464044294753,4.54641980304801,2.33216637578486,2.8946611281802,2.03228509183265,1.70542270593436,4.07412441105065,2.8856664581782,2.58159273117352,1.67506257441816,2.38043640886014,3.31727201358258,3.15270288212382,3.76489972402917,8.13219320153184,3.76885623846197,3.62638461918381,3.90552458170081,0,0.54390568381871,0.983528546038072,1.65562047782839,0.321101179975584,1.17211686592203,1.80328439914343,2.7771801992481,1.89304931649754,1.56175497718655,1.29254038639679,2.15071918157297,3.34198011123591,4.24614796183249,4.85772842009873,2.04579100537918,1.58115111178609,0.963963949265421,1.27746076687442,2.31485284767432,4.72372182125371,1.48473110675282,0,0.971122544619926,0.604647113929502,0.754420319023592,1.18120757152309,1.53717573971964,1.80899805217755,2.18120237686503,1.42598951353889,1.26414703174326,0,1.03135543248187,1.02131881726136,1.44048875225048,1.4229455216103,2.7863814554107,0.532020700926821,1.96205699362278,2.63278432963394,1.522324745573,6.33613611772018,5.08396970073168,0.661585194164886,2.4732937941222,2.58343082713449,2.5934557719107,1.67121281604391,2.1338316966858,1.45740418314925,0.370850604021019,2.05045056957423,2.06386867963222,2.03713980106683,1.88368457004691,3.00727300986255,1.83022538565218,0.849892149969277,0.69975726161829,1.10559979043539,2.86401185404534,1.58167996790568,2.03319467126849,1.72808545314882,1.46361807210128,1.9652630737156,2.42755823492677,3.05817786183743,2.87931536182433,1.03691978633434,1.24267862617385,0.56369293868419,1.79419855252775,1.98550188548517,2.91676782516071,1.6790777052105,1.35164900392623,1.87771581833206,3.1249052362548,2.09718688851422,1.69108884578204,2.59227005632079,0.632022241256357,1.41907650703115,0.924398614483445,0.389762468933385,1.07416017400489,1.39076948346885,0.841368146639782,0.295379054349154,0.403865799792591,0.533447646584999,0.907435666231565,0.38983152295901,0.769694733122636,0.818138315270983,0.906921534460845,0.221985953374065,0,0,2.70465431645067,4.6920618862795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|short_description=p3@Rgl1
}}

Revision as of 19:14, 13 September 2013

Short description:p3@Rgl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rgl1_5end
Coexpression cluster:MCL_coexpression_mm9:3238
Association with transcript: -13bp_to_NM_016846, uc007czh.1_5end
EntrezGene:Rgl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rgl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A818.05
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G13.32
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.77
kidney, neonate N10.CNhs11206.758-6D56.01
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F36.91
kidney, neonate N30.CNhs11203.1385-42H19.87
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A93.06
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B41.16





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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