FFCP PHASE1:Mm9::chr1:152295975..152295981,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=108989|HGNC=|MCL_coexpression_id=29|UniProt=|association_with_transcript=-19bp_to_ENSMUST00000130779_5end|description=CAGE_peak_30_at_Tpr_5end|id=chr1:152295975..152295981,+|ontology_enrichment_celltype=CL:0000791!4.99e-57!9;CL:0000789!4.99e-57!9;CL:0002420!4.99e-57!9;CL:0002419!4.99e-57!9;CL:0000790!4.99e-57!9;CL:0000624!6.59e-51!8;CL:0000084!1.54e-46!11;CL:0000827!1.54e-46!11;CL:0000838!1.33e-42!12;CL:0000542!2.85e-39!13;CL:0000051!2.85e-39!13;CL:0000893!4.77e-38!6;CL:0002489!4.77e-38!6;CL:0000898!4.77e-38!6;CL:0000809!4.77e-38!6;CL:0000810!4.77e-38!6;CL:0000895!4.77e-38!6;CL:0000808!4.77e-38!6;CL:0000894!4.77e-38!6;CL:0000806!4.77e-38!6;CL:0000807!4.77e-38!6;CL:0000805!4.77e-38!6;CL:0002425!4.77e-38!6;CL:0002436!4.77e-38!6;CL:0002427!4.77e-38!6;CL:0002428!4.77e-38!6;CL:0002429!4.77e-38!6;CL:0002433!4.77e-38!6;CL:0002431!4.77e-38!6;CL:0002432!4.77e-38!6;CL:0000738!7.44e-30!17;CL:0002087!7.44e-30!17;CL:0002031!4.87e-20!25;CL:0000988!1.84e-15!32;CL:0002032!1.84e-15!32;CL:0000037!1.84e-15!32;CL:0000566!1.84e-15!32;CL:0000837!1.84e-15!32;CL:0002320!1.82e-10!46;CL:0000134!1.82e-10!46;CL:0000219!9.12e-09!54;CL:0000815!4.65e-08!1;CL:0000792!4.65e-08!1;CL:0000625!1.14e-07!1;CL:0000063!5.54e-07!66|ontology_enrichment_celltype_v019_2=CL:0000624,2.45e-33,8;CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000791,8.84e-30,9;CL:0000789,8.84e-30,9;CL:0002420,8.84e-30,9;CL:0002419,8.84e-30,9;CL:0000790,8.84e-30,9;CL:0000084,1.34e-24,11;CL:0000827,1.34e-24,11;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.90e-21!23;UBERON:0000974!2.90e-21!23;UBERON:0004807!2.90e-21!23;UBERON:0005058!2.90e-21!23;UBERON:0003351!2.90e-21!23;UBERON:0009113!2.90e-21!23;UBERON:0003295!2.90e-21!23;UBERON:0009722!2.90e-21!23;UBERON:0005562!2.90e-21!23;UBERON:0007690!2.90e-21!23;UBERON:0006562!2.42e-20!24;UBERON:0003408!2.42e-20!24;UBERON:0001557!2.42e-20!24;UBERON:0001042!2.42e-20!24;UBERON:0008814!2.42e-20!24;UBERON:0009145!2.42e-20!24;UBERON:0000072!5.47e-18!27;UBERON:0004177!1.09e-16!29;UBERON:0000063!1.13e-13!35;UBERON:0000065!1.55e-11!41;UBERON:0001004!3.07e-11!42;UBERON:0002384!1.82e-10!46;UBERON:0002390!2.00e-10!45;UBERON:0003061!2.00e-10!45;UBERON:0002193!1.03e-09!48;UBERON:0005057!4.39e-09!51;UBERON:0003929!2.37e-08!55;UBERON:0002368!1.43e-07!60;UBERON:0002530!6.57e-07!65;UBERON:0000490!8.67e-07!66|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,0.84473233291,0.468129052643987,0.171217968225505,0.159544317990673,1.19840510951844,0.611942816932982,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p30@Tpr}} | ||
|EntrezGene=108989 | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENSMUST00000130779_5end | |||
|description=CAGE_peak_30_at_Tpr_5end | |||
|id=chr1:152295975..152295981,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.99e-57!9;CL:0000789!4.99e-57!9;CL:0002420!4.99e-57!9;CL:0002419!4.99e-57!9;CL:0000790!4.99e-57!9;CL:0000624!6.59e-51!8;CL:0000084!1.54e-46!11;CL:0000827!1.54e-46!11;CL:0000838!1.33e-42!12;CL:0000542!2.85e-39!13;CL:0000051!2.85e-39!13;CL:0000893!4.77e-38!6;CL:0002489!4.77e-38!6;CL:0000898!4.77e-38!6;CL:0000809!4.77e-38!6;CL:0000810!4.77e-38!6;CL:0000895!4.77e-38!6;CL:0000808!4.77e-38!6;CL:0000894!4.77e-38!6;CL:0000806!4.77e-38!6;CL:0000807!4.77e-38!6;CL:0000805!4.77e-38!6;CL:0002425!4.77e-38!6;CL:0002436!4.77e-38!6;CL:0002427!4.77e-38!6;CL:0002428!4.77e-38!6;CL:0002429!4.77e-38!6;CL:0002433!4.77e-38!6;CL:0002431!4.77e-38!6;CL:0002432!4.77e-38!6;CL:0000738!7.44e-30!17;CL:0002087!7.44e-30!17;CL:0002031!4.87e-20!25;CL:0000988!1.84e-15!32;CL:0002032!1.84e-15!32;CL:0000037!1.84e-15!32;CL:0000566!1.84e-15!32;CL:0000837!1.84e-15!32;CL:0002320!1.82e-10!46;CL:0000134!1.82e-10!46;CL:0000219!9.12e-09!54;CL:0000815!4.65e-08!1;CL:0000792!4.65e-08!1;CL:0000625!1.14e-07!1;CL:0000063!5.54e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.45e-33,8;CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000791,8.84e-30,9;CL:0000789,8.84e-30,9;CL:0002420,8.84e-30,9;CL:0002419,8.84e-30,9;CL:0000790,8.84e-30,9;CL:0000084,1.34e-24,11;CL:0000827,1.34e-24,11;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.90e-21!23;UBERON:0000974!2.90e-21!23;UBERON:0004807!2.90e-21!23;UBERON:0005058!2.90e-21!23;UBERON:0003351!2.90e-21!23;UBERON:0009113!2.90e-21!23;UBERON:0003295!2.90e-21!23;UBERON:0009722!2.90e-21!23;UBERON:0005562!2.90e-21!23;UBERON:0007690!2.90e-21!23;UBERON:0006562!2.42e-20!24;UBERON:0003408!2.42e-20!24;UBERON:0001557!2.42e-20!24;UBERON:0001042!2.42e-20!24;UBERON:0008814!2.42e-20!24;UBERON:0009145!2.42e-20!24;UBERON:0000072!5.47e-18!27;UBERON:0004177!1.09e-16!29;UBERON:0000063!1.13e-13!35;UBERON:0000065!1.55e-11!41;UBERON:0001004!3.07e-11!42;UBERON:0002384!1.82e-10!46;UBERON:0002390!2.00e-10!45;UBERON:0003061!2.00e-10!45;UBERON:0002193!1.03e-09!48;UBERON:0005057!4.39e-09!51;UBERON:0003929!2.37e-08!55;UBERON:0002368!1.43e-07!60;UBERON:0002530!6.57e-07!65;UBERON:0000490!8.67e-07!66 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,0.84473233291,0.468129052643987,0.171217968225505,0.159544317990673,1.19840510951844,0.611942816932982,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p30@Tpr | |||
}} |
Revision as of 19:12, 13 September 2013
Short description: | p30@Tpr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_Tpr_5end |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | -19bp_to_ENSMUST00000130779_5end |
EntrezGene: | Tpr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.45e-33 | 8 |
regulatory T cell | 2.87e-30 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.87e-30 | 1 |
mature alpha-beta T cell | 8.84e-30 | 9 |
alpha-beta T cell | 8.84e-30 | 9 |
immature T cell | 8.84e-30 | 9 |
mature T cell | 8.84e-30 | 9 |
immature alpha-beta T cell | 8.84e-30 | 9 |
T cell | 1.34e-24 | 11 |
pro-T cell | 1.34e-24 | 11 |
lymphoid lineage restricted progenitor cell | 1.18e-22 | 12 |
lymphocyte | 5.26e-21 | 13 |
common lymphoid progenitor | 5.26e-21 | 13 |
leukocyte | 2.41e-16 | 17 |
nongranular leukocyte | 2.41e-16 | 17 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
hematopoietic cell | 3.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 32 |
hematopoietic stem cell | 3.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.