FFCP PHASE1:Hg19::chr6:161412791..161412825,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6856 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y6R4,F5H0A4,F5H2S6,Q9P1M2 | |||
|association_with_transcript=0bp_to_ENST00000392142,ENST00000540111,ENST00000542952,NM_005922,NM_006724,uc003qtn.2,uc003qto.2,uc010kkc.1,uc011efz.1,uc011ega.1_5end | |||
|description=CAGE_peak_1_at_MAP3K4_5end | |||
|id=chr6:161412791..161412825,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.57e-13!52;CL:0000542!1.63e-12!53;CL:0000051!1.63e-12!53;CL:0000084!1.91e-07!25;CL:0000827!1.91e-07!25;CL:0000791!3.93e-07!18;CL:0000789!3.93e-07!18;CL:0002420!3.93e-07!18;CL:0002419!3.93e-07!18;CL:0000790!3.93e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.94e-08;53!CL:0000084;1.59e-07;25!CL:0000791;3.25e-07;18!CL:0000789;3.25e-07;18!CL:0002419;3.25e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,4.57e-13,52;CL:0000542,1.63e-12,53;CL:0000051,1.63e-12,53;CL:0000084,1.91e-07,25;CL:0000827,1.91e-07,25;CL:0000791,3.93e-07,18;CL:0000789,3.93e-07,18;CL:0002420,3.93e-07,18;CL:0002419,3.93e-07,18;CL:0000790,3.93e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;7.94e-08;53!CL:0000790;3.25e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!3.64e-09!51;DOID:0060083!3.64e-09!51;DOID:8692!6.02e-09!31;DOID:1240!6.43e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.57e-09;31!DOID:1240;1.54e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.64e-09,51;DOID:0060083,3.64e-09,51;DOID:8692,6.02e-09,31;DOID:1240,6.43e-09,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002791;4.28e-10;32!UBERON:0002780;5.68e-10;41!UBERON:0001890;5.68e-10;41!UBERON:0003528;6.12e-10;34!UBERON:0002020;6.12e-10;34!UBERON:0001869;6.73e-10;32!UBERON:0001893;7.16e-10;34!UBERON:0000956;9.88e-09;25!UBERON:0000203;9.88e-09;25!UBERON:0000073;1.55e-08;53!UBERON:0002616;1.55e-08;53!UBERON:0007023;2.18e-08;114!UBERON:0002619;3.37e-08;22!UBERON:0001950;1.20e-07;20 | |||
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| |||
|short_description=p1@MAP3K4 | |||
}} |
Revision as of 19:11, 13 September 2013
Short description: | p1@MAP3K4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MAP3K4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392142, ENST00000540111, ENST00000542952, NM_005922, NM_006724, uc003qtn.2, uc003qto.2, uc010kkc.1, uc011efz.1, uc011ega.1_5end |
EntrezGene: | MAP3K4 |
HGNC: | 6856 |
UniProt: | Q9Y6R4F5H0A4F5H2S6Q9P1M2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 4.57e-13 | 52 |
lymphocyte | 1.63e-12 | 53 |
common lymphoid progenitor | 1.63e-12 | 53 |
T cell | 1.91e-07 | 25 |
pro-T cell | 1.91e-07 | 25 |
mature alpha-beta T cell | 3.93e-07 | 18 |
alpha-beta T cell | 3.93e-07 | 18 |
immature T cell | 3.93e-07 | 18 |
mature T cell | 3.93e-07 | 18 |
immature alpha-beta T cell | 3.93e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.78e-28 | 114 |
neural tube | 9.63e-15 | 56 |
neural rod | 9.63e-15 | 56 |
future spinal cord | 9.63e-15 | 56 |
neural keel | 9.63e-15 | 56 |
regional part of nervous system | 4.45e-14 | 53 |
regional part of brain | 4.45e-14 | 53 |
regional part of forebrain | 4.73e-13 | 41 |
forebrain | 4.73e-13 | 41 |
anterior neural tube | 4.73e-13 | 41 |
future forebrain | 4.73e-13 | 41 |
central nervous system | 8.75e-13 | 81 |
nervous system | 3.76e-12 | 89 |
brain | 4.15e-12 | 68 |
future brain | 4.15e-12 | 68 |
brain grey matter | 1.79e-11 | 34 |
gray matter | 1.79e-11 | 34 |
telencephalon | 2.38e-11 | 34 |
regional part of telencephalon | 6.69e-11 | 32 |
cerebral hemisphere | 1.10e-10 | 32 |
neurectoderm | 3.52e-10 | 86 |
neural plate | 1.52e-09 | 82 |
presumptive neural plate | 1.52e-09 | 82 |
cerebral cortex | 1.03e-08 | 25 |
pallium | 1.03e-08 | 25 |
regional part of cerebral cortex | 3.39e-08 | 22 |
neocortex | 1.19e-07 | 20 |
pre-chordal neural plate | 2.21e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.64e-09 | 51 |
immune system cancer | 3.64e-09 | 51 |
myeloid leukemia | 6.02e-09 | 31 |
leukemia | 6.43e-09 | 39 |
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