FFCP PHASE1:Mm9::chr1:142079981..142079992,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12628|HGNC=|MCL_coexpression_id=8|UniProt=Q6NZK3,E9Q8I0|association_with_transcript=0bp_to_ENSMUST00000066859,ENSMUST00000111976,ENSMUST00000148225,NM_009888,uc007cws.1,uc007cwt.1,uc007cwu.1,uc011wtg.1_5end|description=CAGE_peak_3_at_Cfh_5end|id=chr1:142079981..142079992,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!2.67e-14!49;UBERON:0005173!2.67e-14!49;UBERON:0002417!2.67e-14!49;UBERON:0000916!2.67e-14!49;UBERON:0009569!2.17e-12!66;UBERON:0005256!3.08e-12!47;UBERON:0003914!4.23e-11!47;UBERON:0002100!2.59e-10!98;UBERON:0001008!1.72e-09!17;UBERON:0005177!2.01e-09!85;UBERON:0006554!3.93e-09!16;UBERON:0002113!1.85e-08!14;UBERON:0003918!1.85e-08!14;UBERON:0005095!1.85e-08!14;UBERON:0007687!1.85e-08!14;UBERON:0009854!2.76e-08!23;UBERON:0009856!2.76e-08!23;UBERON:0000926!4.47e-08!193;UBERON:0004120!4.47e-08!193;UBERON:0006603!4.47e-08!193;UBERON:0003104!4.51e-08!131;UBERON:0009142!4.51e-08!131;UBERON:0002107!6.03e-08!22;UBERON:0007499!6.03e-08!22;UBERON:0006925!6.03e-08!22;UBERON:0009497!6.03e-08!22;UBERON:0000015!6.03e-08!22;UBERON:0002423!6.03e-08!22;UBERON:0006235!6.03e-08!22;UBERON:0008835!6.03e-08!22;UBERON:0003894!6.03e-08!22;UBERON:0004161!6.03e-08!22;UBERON:0008836!6.03e-08!22;UBERON:0002365!2.51e-07!25;UBERON:0002330!2.51e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.05e-25,61;UBERON:0009142,1.05e-25,61;UBERON:0005172,3.07e-19,49;UBERON:0005173,3.07e-19,49;UBERON:0002417,3.07e-19,49;UBERON:0000916,3.07e-19,49;UBERON:0005256,3.80e-19,45;UBERON:0002100,2.16e-15,90;UBERON:0009569,6.85e-15,66;UBERON:0003914,1.51e-13,47;UBERON:0005177,3.20e-12,79;UBERON:0002113,1.70e-11,14;UBERON:0003918,1.70e-11,14;UBERON:0011143,1.70e-11,14;UBERON:0005095,1.70e-11,14;UBERON:0007687,1.70e-11,14;UBERON:0001008,5.39e-11,19;UBERON:0009854,6.67e-11,23;UBERON:0009856,6.67e-11,23;UBERON:0006554,1.82e-10,18;UBERON:0002107,2.04e-10,22;UBERON:0007499,2.04e-10,22;UBERON:0006925,2.04e-10,22;UBERON:0009497,2.04e-10,22;UBERON:0000015,2.04e-10,22;UBERON:0002423,2.04e-10,22;UBERON:0006235,2.04e-10,22;UBERON:0008835,2.04e-10,22;UBERON:0003894,2.04e-10,22;UBERON:0004161,2.04e-10,22;UBERON:0008836,2.04e-10,22;UBERON:0002365,2.28e-09,25;UBERON:0002330,2.28e-09,25;UBERON:0003064,5.93e-08,14;UBERON:0000489,3.16e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.92616169317078,5.32285581268876,0,0,0,0.388859798148567,0,0,0,0,0,4.3734104126111,8.88253663810146,13.4074743992135,0,0,0,1.35537812827653,0.889294796111139,0.449949858640699,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0,0,0,0.56276261003168,1.37518422999129,0.589257170947335,0,0.186399445825301,0.075726193333184,0.151143120213571,4.05810284182349,61.9505191426598,46.238050692127,104.702419177737,156.596116604888,105.286318467874,13.7635531729117,0,0,0,0,0,0,0,0,0,0,20.2105467102736,1.8125651855302,32.8057127333263,1.38788261412909,0.608930956624282,2.7673859670727,2.56228488939458,3.64524992120685,8.04266184509923,0.494389935468748,14.4599356919912,0,0.970601099684455,1.98757366614354,2.42437626567611,1.86391761218122,0.585561594023094,1.04723353406728,0,0,0,0,0.599162557619291,0.457500602818626,0,0.173824320192276,0.511430914660661,0.41557608911912,0.486723789203273,2.95334155165917,6.34475550111474,2.27450482590307,5.26104639716185,0,0,0,0.150704817835715,0.272145996605311,0.640568601424249,0.655912071918102,1.55222022443409,0,0,0,0.43839146485515,0.556094498451196,1.0447564995665,0.205782136407943,1.59227413454795,0,0,0,0,0.234526059981096,0.540186184383045,0,0,0.771335564436891,0.232533944750408,0,0.233530684734339,0.658239399653922,1.47750717671186,4.05344047729279,5.11699955988663,5.26920276698522,8.58921080066379,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0.949058123089023,0,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.398282546508734,1.89667900953082,7.19765629441292,10.1436962105772,9.9789150644204,12.2190066915604,13.1153983194896,15.8091342810643,12.5468625782662,12.2459007716272,13.9438795231635,77.3741356697459,0,0,0,0.202860121388503,0.482354319504834,0.50925170356284,9.20627639842594,7.45822043165163,9.88421087477093,43.1304619582064,27.1662891798007,37.4445207737473,43.1909881289561,58.3041593946215,47.7619086149734,6.83586803616437,0.37898282354097,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.585400943573396,0.945810864637146,0.44292937929755,0.637819074629948,5.24362607090362,5.52591941970866,7.37710198765709,0,0,0.491764273019036,0,0.642202359951168,1.05490517932983,0,1.00988370881749,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.642642632843614,19.5877317587411,1.78065603667255,3.25773918707152,28.044920905331,1.32745138339963,0,0,0,0,0.614870295887855,0.258428293168221,0,0.712994756769443,0.316036757935816,1.05418608574999,0,3.74483566329167,0,0,0.428674070063185,1.06404140185364,0.891844088010353,0.987294123612726,1.8267896946876,0.469343416127421,0.21183207086382,1.54369878638473,0.16488625294148,0,0,0,0,0.582961673259701,0.556275906031529,0.683483523191411,0,0,0,0.27338845544205,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,0,0.418176592028937,0.436725127492355,0.404593039154462,1.90102948168273,3.14107130380836,0.777689839750757,1.24267862617385,0,1.19613236835183,0.66183396182839,0.972255941720238,0.904118764344118,0.844780627453891,1.29092962510329,0.2604087696879,0.104859344425711,0,0.288030006257865,0.632022241256357,1.21635129174099,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0.467507608726276,4.53460767230423,0,0,0,3.47741269257943,16.1406928888016,26.1906822702189,2.14368379079066,1.50471631210609,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0,0.367687016900028,1.77797382241292,0.618105171716683,1.60459604795908,0.758091635291392,1.77435509923168,1.13175804831646,0.936415074698824,1.02440243847791,1.32101578597911,1.42888107384922,0.927074607558844,0.192909220463705,2.88460130562315,0.735994600671987,1.71434626192708,1.24233064311536,0.715308569841963,0.872078499793971,1.2234219453993,1.35383372626682,1.28049581010941,1.31534855718921,2.30866993537965,1.12228454331548,1.18635018124174,0.394017929502254,0.818462086339379,0.77468420592983,0.964533054905707,0,1.16965804222704,1.07435527024149,0.57386499620653,1.32354851471709,1.15933917810211|short_description=p3@Cfh}} | ||
|EntrezGene=12628 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q6NZK3,E9Q8I0 | |||
|association_with_transcript=0bp_to_ENSMUST00000066859,ENSMUST00000111976,ENSMUST00000148225,NM_009888,uc007cws.1,uc007cwt.1,uc007cwu.1,uc011wtg.1_5end | |||
|description=CAGE_peak_3_at_Cfh_5end | |||
|id=chr1:142079981..142079992,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!2.67e-14!49;UBERON:0005173!2.67e-14!49;UBERON:0002417!2.67e-14!49;UBERON:0000916!2.67e-14!49;UBERON:0009569!2.17e-12!66;UBERON:0005256!3.08e-12!47;UBERON:0003914!4.23e-11!47;UBERON:0002100!2.59e-10!98;UBERON:0001008!1.72e-09!17;UBERON:0005177!2.01e-09!85;UBERON:0006554!3.93e-09!16;UBERON:0002113!1.85e-08!14;UBERON:0003918!1.85e-08!14;UBERON:0005095!1.85e-08!14;UBERON:0007687!1.85e-08!14;UBERON:0009854!2.76e-08!23;UBERON:0009856!2.76e-08!23;UBERON:0000926!4.47e-08!193;UBERON:0004120!4.47e-08!193;UBERON:0006603!4.47e-08!193;UBERON:0003104!4.51e-08!131;UBERON:0009142!4.51e-08!131;UBERON:0002107!6.03e-08!22;UBERON:0007499!6.03e-08!22;UBERON:0006925!6.03e-08!22;UBERON:0009497!6.03e-08!22;UBERON:0000015!6.03e-08!22;UBERON:0002423!6.03e-08!22;UBERON:0006235!6.03e-08!22;UBERON:0008835!6.03e-08!22;UBERON:0003894!6.03e-08!22;UBERON:0004161!6.03e-08!22;UBERON:0008836!6.03e-08!22;UBERON:0002365!2.51e-07!25;UBERON:0002330!2.51e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.05e-25,61;UBERON:0009142,1.05e-25,61;UBERON:0005172,3.07e-19,49;UBERON:0005173,3.07e-19,49;UBERON:0002417,3.07e-19,49;UBERON:0000916,3.07e-19,49;UBERON:0005256,3.80e-19,45;UBERON:0002100,2.16e-15,90;UBERON:0009569,6.85e-15,66;UBERON:0003914,1.51e-13,47;UBERON:0005177,3.20e-12,79;UBERON:0002113,1.70e-11,14;UBERON:0003918,1.70e-11,14;UBERON:0011143,1.70e-11,14;UBERON:0005095,1.70e-11,14;UBERON:0007687,1.70e-11,14;UBERON:0001008,5.39e-11,19;UBERON:0009854,6.67e-11,23;UBERON:0009856,6.67e-11,23;UBERON:0006554,1.82e-10,18;UBERON:0002107,2.04e-10,22;UBERON:0007499,2.04e-10,22;UBERON:0006925,2.04e-10,22;UBERON:0009497,2.04e-10,22;UBERON:0000015,2.04e-10,22;UBERON:0002423,2.04e-10,22;UBERON:0006235,2.04e-10,22;UBERON:0008835,2.04e-10,22;UBERON:0003894,2.04e-10,22;UBERON:0004161,2.04e-10,22;UBERON:0008836,2.04e-10,22;UBERON:0002365,2.28e-09,25;UBERON:0002330,2.28e-09,25;UBERON:0003064,5.93e-08,14;UBERON:0000489,3.16e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.92616169317078,5.32285581268876,0,0,0,0.388859798148567,0,0,0,0,0,4.3734104126111,8.88253663810146,13.4074743992135,0,0,0,1.35537812827653,0.889294796111139,0.449949858640699,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0,0,0,0.56276261003168,1.37518422999129,0.589257170947335,0,0.186399445825301,0.075726193333184,0.151143120213571,4.05810284182349,61.9505191426598,46.238050692127,104.702419177737,156.596116604888,105.286318467874,13.7635531729117,0,0,0,0,0,0,0,0,0,0,20.2105467102736,1.8125651855302,32.8057127333263,1.38788261412909,0.608930956624282,2.7673859670727,2.56228488939458,3.64524992120685,8.04266184509923,0.494389935468748,14.4599356919912,0,0.970601099684455,1.98757366614354,2.42437626567611,1.86391761218122,0.585561594023094,1.04723353406728,0,0,0,0,0.599162557619291,0.457500602818626,0,0.173824320192276,0.511430914660661,0.41557608911912,0.486723789203273,2.95334155165917,6.34475550111474,2.27450482590307,5.26104639716185,0,0,0,0.150704817835715,0.272145996605311,0.640568601424249,0.655912071918102,1.55222022443409,0,0,0,0.43839146485515,0.556094498451196,1.0447564995665,0.205782136407943,1.59227413454795,0,0,0,0,0.234526059981096,0.540186184383045,0,0,0.771335564436891,0.232533944750408,0,0.233530684734339,0.658239399653922,1.47750717671186,4.05344047729279,5.11699955988663,5.26920276698522,8.58921080066379,0,0.102904612379284,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0.949058123089023,0,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.398282546508734,1.89667900953082,7.19765629441292,10.1436962105772,9.9789150644204,12.2190066915604,13.1153983194896,15.8091342810643,12.5468625782662,12.2459007716272,13.9438795231635,77.3741356697459,0,0,0,0.202860121388503,0.482354319504834,0.50925170356284,9.20627639842594,7.45822043165163,9.88421087477093,43.1304619582064,27.1662891798007,37.4445207737473,43.1909881289561,58.3041593946215,47.7619086149734,6.83586803616437,0.37898282354097,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.585400943573396,0.945810864637146,0.44292937929755,0.637819074629948,5.24362607090362,5.52591941970866,7.37710198765709,0,0,0.491764273019036,0,0.642202359951168,1.05490517932983,0,1.00988370881749,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0.642642632843614,19.5877317587411,1.78065603667255,3.25773918707152,28.044920905331,1.32745138339963,0,0,0,0,0.614870295887855,0.258428293168221,0,0.712994756769443,0.316036757935816,1.05418608574999,0,3.74483566329167,0,0,0.428674070063185,1.06404140185364,0.891844088010353,0.987294123612726,1.8267896946876,0.469343416127421,0.21183207086382,1.54369878638473,0.16488625294148,0,0,0,0,0.582961673259701,0.556275906031529,0.683483523191411,0,0,0,0.27338845544205,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,0,0.418176592028937,0.436725127492355,0.404593039154462,1.90102948168273,3.14107130380836,0.777689839750757,1.24267862617385,0,1.19613236835183,0.66183396182839,0.972255941720238,0.904118764344118,0.844780627453891,1.29092962510329,0.2604087696879,0.104859344425711,0,0.288030006257865,0.632022241256357,1.21635129174099,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0.467507608726276,4.53460767230423,0,0,0,3.47741269257943,16.1406928888016,26.1906822702189,2.14368379079066,1.50471631210609,0,0,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0,0.367687016900028,1.77797382241292,0.618105171716683,1.60459604795908,0.758091635291392,1.77435509923168,1.13175804831646,0.936415074698824,1.02440243847791,1.32101578597911,1.42888107384922,0.927074607558844,0.192909220463705,2.88460130562315,0.735994600671987,1.71434626192708,1.24233064311536,0.715308569841963,0.872078499793971,1.2234219453993,1.35383372626682,1.28049581010941,1.31534855718921,2.30866993537965,1.12228454331548,1.18635018124174,0.394017929502254,0.818462086339379,0.77468420592983,0.964533054905707,0,1.16965804222704,1.07435527024149,0.57386499620653,1.32354851471709,1.15933917810211 | |||
|short_description=p3@Cfh | |||
}} |
Revision as of 19:10, 13 September 2013
Short description: | p3@Cfh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cfh_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000066859, ENSMUST00000111976, ENSMUST00000148225, NM_009888, uc007cws.1, uc007cwt.1, uc007cwu.1, uc011wtg.1_5end |
EntrezGene: | Cfh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.05e-25 | 61 |
entire embryonic mesenchyme | 1.05e-25 | 61 |
abdomen element | 3.07e-19 | 49 |
abdominal segment element | 3.07e-19 | 49 |
abdominal segment of trunk | 3.07e-19 | 49 |
abdomen | 3.07e-19 | 49 |
trunk mesenchyme | 3.80e-19 | 45 |
trunk | 2.16e-15 | 90 |
subdivision of trunk | 6.85e-15 | 66 |
epithelial tube | 1.51e-13 | 47 |
trunk region element | 3.20e-12 | 79 |
kidney | 1.70e-11 | 14 |
kidney mesenchyme | 1.70e-11 | 14 |
upper urinary tract | 1.70e-11 | 14 |
kidney rudiment | 1.70e-11 | 14 |
kidney field | 1.70e-11 | 14 |
renal system | 5.39e-11 | 19 |
digestive tract diverticulum | 6.67e-11 | 23 |
sac | 6.67e-11 | 23 |
urinary system structure | 1.82e-10 | 18 |
liver | 2.04e-10 | 22 |
epithelial sac | 2.04e-10 | 22 |
digestive gland | 2.04e-10 | 22 |
epithelium of foregut-midgut junction | 2.04e-10 | 22 |
anatomical boundary | 2.04e-10 | 22 |
hepatobiliary system | 2.04e-10 | 22 |
foregut-midgut junction | 2.04e-10 | 22 |
hepatic diverticulum | 2.04e-10 | 22 |
liver primordium | 2.04e-10 | 22 |
septum transversum | 2.04e-10 | 22 |
liver bud | 2.04e-10 | 22 |
exocrine gland | 2.28e-09 | 25 |
exocrine system | 2.28e-09 | 25 |
intermediate mesoderm | 5.93e-08 | 14 |
cavitated compound organ | 3.16e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.