Personal tools

FFCP PHASE1:Mm9::chr1:130256174..130256186,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=17219|HGNC=|MCL_coexpression_id=151|UniProt=Q3ULG5|association_with_transcript=37bp_to_ENSMUST00000164171_5end|description=CAGE_peak_2_at_Mcm6_5end|id=chr1:130256174..130256186,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002323!1.12e-07!37;UBERON:0004458!1.12e-07!37;UBERON:0000991!3.70e-07!18;UBERON:0005564!3.70e-07!18;UBERON:0003886!5.20e-07!38|ontology_enrichment_uberon_v019_2=UBERON:0002323,8.28e-08,37;UBERON:0004458,8.28e-08,37;UBERON:0000991,1.74e-07,18;UBERON:0005564,1.74e-07,18;UBERON:0003886,3.52e-07,38;UBERON:0004176,7.48e-07,17;UBERON:0009196,7.48e-07,17;UBERON:0009117,7.48e-07,17|phase1_expression=4.16387002472464,0,0,0,0,1.17515490338323,0.467225281191051,0.129123323441576,3.66050677594334,3.27690336850791,0.68487187290202,0.478632953972018,0.513602189793617,0.262261207256992,5.99597571268193,3.23960427823721,4.19737126876888,0.630924330716475,0.959801035240171,0.84877930359606,2.8064285749853,15.588679338539,11.2315909329742,0.95995453676044,0.91763712426868,0,0,0.430942465371778,0,1.76421090831952,0.886922042621219,4.44521471421742,3.69038872550742,0,5.48818077527422,5.81821258754723,4.49172583777212,0.837063261473815,1.5626706890476,1.0470474879476,0.588231488031014,0,0.485510353031154,1.25896817975577,1.11514624341466,1.65192076945513,0,1.52617609466313,0.659058548203415,0.194429899074283,1.53985063787899,1.43752564364972,2.34895648480831,0.725362142011344,4.36921938885203,0.771778308107841,1.14613375975503,0,2.22548106945558,1.5869729378161,0.633831403506179,0.338844532069132,0,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,2.7996195323289,2.43010688997043,2.3135745748652,2.28520787523043,1.76694832761291,4.16468717330844,3.64212789869298,3.67687514644008,0,0.638436690425939,0.307213066512487,1.31886287730194,1.64677758484337,1.56274011167028,0,0.56276261003168,0.916789486660861,2.94628585473668,3.98640706237488,2.05039390407831,0.832988126665025,2.72057616384428,2.6087803983151,0,3.39985666853875,0,0,0,0.983110940922263,3.74946709671727,3.11743205523443,2.47337702157238,1.97180787687353,0,0,0,2.16491041011214,2.28023878927589,0.505524445014783,0.45673551887624,1.55362730188303,0.445326417194474,9.54169297213747,6.39377504455497,4.38169444786511,4.22023393547343,2.58695155698551,0.879666139307728,1.73036477414062,0.722996784599558,1.76922110389975,1.94120219936891,2.42925670306433,3.39412677194655,0,0,0.41889341362691,0.510914110417183,17.1335628043466,12.5979573508616,13.723584523891,0.149790639404823,0,1.50785222535437,0.521472960576829,0.255715457330331,0.41557608911912,0,11.3041693873851,2.73695335342205,0.252722758433675,0.210441855886474,10.6698763229417,7.12696523743766,5.76198815377118,6.78171680260718,7.48401490664606,5.50888997224854,4.8724896771059,0.258703370739016,7.54487975264948,10.5899404893979,8.62160508403349,8.11024209982027,8.06337022754234,3.48252166522167,4.32142486456681,14.3304672109315,11.937624184325,7.46308930632674,12.5031939734061,7.24940203874257,5.15957331958412,5.58192390529146,3.55117103377815,5.1158700254325,5.86215028972037,3.0229412817553,2.95100741539581,2.10177616260905,3.29119699826961,1.64167464079095,1.05389452409612,0.146199987425332,0.439100230582101,0.402619256281115,0.841159794256509,3.19004298375782,0,1.05780226665418,13.0105832826493,10.9151235774406,6.44337306610467,3.42861991859682,3.55804870151792,3.61428689613862,0.474529061544512,1.97638745668813,2.5133520880027,1.79060824837036,1.9496408711912,0.898819408654221,1.51296634912286,0.597423819763102,7.96605184002943,10.8536086979242,9.01661885384643,7.33144780243131,5.43066964069352,4.69909993265134,3.35153646758564,1.32849133181642,1.09899109488962,0.863780147452604,0,4.50481785433454,5.50365186316968,6.07127703439105,4.26006254915856,4.82354319504834,4.83789118384698,3.16465751195892,3.24270453550071,4.66754402419738,4.31304619582064,3.72140947668503,4.05648975048929,3.78868316920668,2.15276896226295,0.482443521363367,1.10851914099963,14.4013472945568,8.31121379854332,9.50572480341054,6.80601720036656,3.68513766371995,1.42826184531608,1.95133647857799,1.7339865851681,2.87904096543407,1.75400245523236,1.14704320301017,1.20879487306127,0.867894351489069,1.50791283939272,1.08781136763742,0.983528546038072,0.551873492609465,0.481651769963376,0.586058432961016,8.85248705034047,0.504941854408746,10.4117712407365,6.63745865304285,3.44677436372478,3.58453196928828,4.23317480756549,3.39691836946599,6.8817819284732,3.21481443702443,4.34816555741176,0.642642632843614,2.98074178937364,9.08134578703002,8.63300884573953,1.15479086080775,1.32745138339963,11.4106898992841,8.46505959501303,6.41257271170054,5.61073596473468,6.7635732547664,3.10113951801865,5.45300594216258,6.06045543254026,0.948110273807448,2.10837217149998,1.03135543248187,0.680879211507576,12.0640933000978,7.50280365939976,7.71613326113732,7.09360934569094,6.0645397984704,4.11372551505302,3.65357938937519,2.11204537257339,1.27099242518292,0.441056796109924,0.65954501176592,3.22928853391811,3.07595917133595,1.55184047204077,1.14898629821543,0.582961673259701,0.370850604021019,4.27177201994632,6.81076664278634,5.74103034846106,5.65105371014073,4.51090951479383,3.66045077130436,8.15896463970505,9.37674730568509,10.7795979567451,0.954670618015114,9.96458379780576,5.69294507955176,5.61627772273367,4.39085421630384,4.58561383866973,2.69728692769641,1.40510874733071,1.30877970992015,1.16653475962614,0,6.20062232552609,13.3069725979141,14.5603471602246,8.36140109879405,11.6243841129958,10.3063236549375,11.6183666259296,9.89553324814021,9.75191903159111,8.21386010808421,7.4887801627045,5.05617793005085,10.5417111950885,10.3738066736476,11.3031115990682,10.3835483487139,6.35780335300048,6.61074972359829,6.64602872285597,6.76475214652589,8.30654192539498,6.65452821903147,5.06780979846713,4.71438024037614,3.74006086981021,0.453460767230423,2.44184548711471,3.6782681209885,3.8613461763738,0.386379188064381,0.750729901804728,0.915758121336325,0.214368379079066,0,0,0,1.14579102687879,0.859265911718438,0,0,0.675022500231806,0.45032120322422,0,0,12.7658437528537,4.38927360741134,8.19521307619844,4.86213434136588,7.75568701723535,4.77993121970037,3.77819437262746,2.88449080134452,4.49286893428541,2.02157769411038,2.78827229879264,5.28153755881013,2.90288673156635,2.4969809437899,3.50356360629241,2.38146845641537,4.1718357340148,3.47236596834669,3.29668720642645,4.85756436443511,3.08582327146874,4.79184676630211,3.81497903915713,3.77900683244054,2.54095327121393,4.06150117880047,2.92684756596436,4.20911538300549,4.20992752922171,4.48913817326191,5.33857581558784,4.53120618927592,4.09231043169689,4.33823155320705,4.05103883060397,1.74867404556562,2.8071793013449,1.50409737833809,1.91288332068843,3.08827986767322,2.78241402744506|short_description=p2@Mcm6}}
|EntrezGene=17219
|HGNC=
|MCL_coexpression_id=151
|UniProt=Q3ULG5
|association_with_transcript=37bp_to_ENSMUST00000164171_5end
|description=CAGE_peak_2_at_Mcm6_5end
|id=chr1:130256174..130256186,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002323!1.12e-07!37;UBERON:0004458!1.12e-07!37;UBERON:0000991!3.70e-07!18;UBERON:0005564!3.70e-07!18;UBERON:0003886!5.20e-07!38
|ontology_enrichment_uberon_v019_2=UBERON:0002323,8.28e-08,37;UBERON:0004458,8.28e-08,37;UBERON:0000991,1.74e-07,18;UBERON:0005564,1.74e-07,18;UBERON:0003886,3.52e-07,38;UBERON:0004176,7.48e-07,17;UBERON:0009196,7.48e-07,17;UBERON:0009117,7.48e-07,17
|phase1_expression=4.16387002472464,0,0,0,0,1.17515490338323,0.467225281191051,0.129123323441576,3.66050677594334,3.27690336850791,0.68487187290202,0.478632953972018,0.513602189793617,0.262261207256992,5.99597571268193,3.23960427823721,4.19737126876888,0.630924330716475,0.959801035240171,0.84877930359606,2.8064285749853,15.588679338539,11.2315909329742,0.95995453676044,0.91763712426868,0,0,0.430942465371778,0,1.76421090831952,0.886922042621219,4.44521471421742,3.69038872550742,0,5.48818077527422,5.81821258754723,4.49172583777212,0.837063261473815,1.5626706890476,1.0470474879476,0.588231488031014,0,0.485510353031154,1.25896817975577,1.11514624341466,1.65192076945513,0,1.52617609466313,0.659058548203415,0.194429899074283,1.53985063787899,1.43752564364972,2.34895648480831,0.725362142011344,4.36921938885203,0.771778308107841,1.14613375975503,0,2.22548106945558,1.5869729378161,0.633831403506179,0.338844532069132,0,0.899899717281399,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,2.7996195323289,2.43010688997043,2.3135745748652,2.28520787523043,1.76694832761291,4.16468717330844,3.64212789869298,3.67687514644008,0,0.638436690425939,0.307213066512487,1.31886287730194,1.64677758484337,1.56274011167028,0,0.56276261003168,0.916789486660861,2.94628585473668,3.98640706237488,2.05039390407831,0.832988126665025,2.72057616384428,2.6087803983151,0,3.39985666853875,0,0,0,0.983110940922263,3.74946709671727,3.11743205523443,2.47337702157238,1.97180787687353,0,0,0,2.16491041011214,2.28023878927589,0.505524445014783,0.45673551887624,1.55362730188303,0.445326417194474,9.54169297213747,6.39377504455497,4.38169444786511,4.22023393547343,2.58695155698551,0.879666139307728,1.73036477414062,0.722996784599558,1.76922110389975,1.94120219936891,2.42925670306433,3.39412677194655,0,0,0.41889341362691,0.510914110417183,17.1335628043466,12.5979573508616,13.723584523891,0.149790639404823,0,1.50785222535437,0.521472960576829,0.255715457330331,0.41557608911912,0,11.3041693873851,2.73695335342205,0.252722758433675,0.210441855886474,10.6698763229417,7.12696523743766,5.76198815377118,6.78171680260718,7.48401490664606,5.50888997224854,4.8724896771059,0.258703370739016,7.54487975264948,10.5899404893979,8.62160508403349,8.11024209982027,8.06337022754234,3.48252166522167,4.32142486456681,14.3304672109315,11.937624184325,7.46308930632674,12.5031939734061,7.24940203874257,5.15957331958412,5.58192390529146,3.55117103377815,5.1158700254325,5.86215028972037,3.0229412817553,2.95100741539581,2.10177616260905,3.29119699826961,1.64167464079095,1.05389452409612,0.146199987425332,0.439100230582101,0.402619256281115,0.841159794256509,3.19004298375782,0,1.05780226665418,13.0105832826493,10.9151235774406,6.44337306610467,3.42861991859682,3.55804870151792,3.61428689613862,0.474529061544512,1.97638745668813,2.5133520880027,1.79060824837036,1.9496408711912,0.898819408654221,1.51296634912286,0.597423819763102,7.96605184002943,10.8536086979242,9.01661885384643,7.33144780243131,5.43066964069352,4.69909993265134,3.35153646758564,1.32849133181642,1.09899109488962,0.863780147452604,0,4.50481785433454,5.50365186316968,6.07127703439105,4.26006254915856,4.82354319504834,4.83789118384698,3.16465751195892,3.24270453550071,4.66754402419738,4.31304619582064,3.72140947668503,4.05648975048929,3.78868316920668,2.15276896226295,0.482443521363367,1.10851914099963,14.4013472945568,8.31121379854332,9.50572480341054,6.80601720036656,3.68513766371995,1.42826184531608,1.95133647857799,1.7339865851681,2.87904096543407,1.75400245523236,1.14704320301017,1.20879487306127,0.867894351489069,1.50791283939272,1.08781136763742,0.983528546038072,0.551873492609465,0.481651769963376,0.586058432961016,8.85248705034047,0.504941854408746,10.4117712407365,6.63745865304285,3.44677436372478,3.58453196928828,4.23317480756549,3.39691836946599,6.8817819284732,3.21481443702443,4.34816555741176,0.642642632843614,2.98074178937364,9.08134578703002,8.63300884573953,1.15479086080775,1.32745138339963,11.4106898992841,8.46505959501303,6.41257271170054,5.61073596473468,6.7635732547664,3.10113951801865,5.45300594216258,6.06045543254026,0.948110273807448,2.10837217149998,1.03135543248187,0.680879211507576,12.0640933000978,7.50280365939976,7.71613326113732,7.09360934569094,6.0645397984704,4.11372551505302,3.65357938937519,2.11204537257339,1.27099242518292,0.441056796109924,0.65954501176592,3.22928853391811,3.07595917133595,1.55184047204077,1.14898629821543,0.582961673259701,0.370850604021019,4.27177201994632,6.81076664278634,5.74103034846106,5.65105371014073,4.51090951479383,3.66045077130436,8.15896463970505,9.37674730568509,10.7795979567451,0.954670618015114,9.96458379780576,5.69294507955176,5.61627772273367,4.39085421630384,4.58561383866973,2.69728692769641,1.40510874733071,1.30877970992015,1.16653475962614,0,6.20062232552609,13.3069725979141,14.5603471602246,8.36140109879405,11.6243841129958,10.3063236549375,11.6183666259296,9.89553324814021,9.75191903159111,8.21386010808421,7.4887801627045,5.05617793005085,10.5417111950885,10.3738066736476,11.3031115990682,10.3835483487139,6.35780335300048,6.61074972359829,6.64602872285597,6.76475214652589,8.30654192539498,6.65452821903147,5.06780979846713,4.71438024037614,3.74006086981021,0.453460767230423,2.44184548711471,3.6782681209885,3.8613461763738,0.386379188064381,0.750729901804728,0.915758121336325,0.214368379079066,0,0,0,1.14579102687879,0.859265911718438,0,0,0.675022500231806,0.45032120322422,0,0,12.7658437528537,4.38927360741134,8.19521307619844,4.86213434136588,7.75568701723535,4.77993121970037,3.77819437262746,2.88449080134452,4.49286893428541,2.02157769411038,2.78827229879264,5.28153755881013,2.90288673156635,2.4969809437899,3.50356360629241,2.38146845641537,4.1718357340148,3.47236596834669,3.29668720642645,4.85756436443511,3.08582327146874,4.79184676630211,3.81497903915713,3.77900683244054,2.54095327121393,4.06150117880047,2.92684756596436,4.20911538300549,4.20992752922171,4.48913817326191,5.33857581558784,4.53120618927592,4.09231043169689,4.33823155320705,4.05103883060397,1.74867404556562,2.8071793013449,1.50409737833809,1.91288332068843,3.08827986767322,2.78241402744506
|short_description=p2@Mcm6
}}

Revision as of 18:43, 13 September 2013

Short description:p2@Mcm6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mcm6_5end
Coexpression cluster:MCL_coexpression_mm9:151
Association with transcript: 37bp_to_ENSMUST00000164171_5end
EntrezGene:Mcm6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Mcm6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.23
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C59.54
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.13
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.72
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C610.67
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C67.48
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H210.59
forelimb, embryo E13.CNhs10589.384-1E28.62
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E78.06
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I614.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.50
heart, embryo E11.CNhs10586.331-24E97.25
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I513.01
intestine, embryo E13.CNhs11010.381-16D510.92
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F810.85
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D53.35
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G214.40
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C59.51
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H79.08
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E612.06
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A57.72
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F25.74
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.78
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F513.31
testis, embryo E15.CNhs11034.443-27C514.56
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I511.62
testis, embryo E18.CNhs11027.503-18G510.31
testis, neonate N00.CNhs11189.1300-22B711.62
testis, neonate N07.CNhs11222.726-26I49.90
testis, neonate N10.CNhs11204.763-44D99.75
testis, neonate N20.CNhs11110.839-18H38.21
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I410.54
thymus, embryo E15.CNhs11005.430-45I210.37
thymus, embryo E16.CNhs11002.456-26C511.30
thymus, embryo E17.CNhs10581.478-18C110.38
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F86.61
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C46.76
thymus, neonate N07.CNhs11211.713-19D38.31
thymus, neonate N10.CNhs11194.748-24E46.65
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G74.71
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.86
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I812.77
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
body cavity8.28e-0837
body cavity or lining8.28e-0837
gonad1.74e-0718
gonad primordium1.74e-0718
body cavity precursor3.52e-0738
external genitalia7.48e-0717
indifferent external genitalia7.48e-0717
indifferent gonad7.48e-0717







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:130256174..130256186,-&oldid=2963170"