FFCP PHASE1:Mm9::chr19:6984578..6984615,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54683|HGNC=|MCL_coexpression_id=0|UniProt=P99029|association_with_transcript=0bp_to_ENSMUST00000025904_5end|description=CAGE_peak_5_at_Prdx5_5end|id=chr19:6984578..6984615,-|ontology_enrichment_celltype=CL:0002031!7.22e-09!25;CL:0000219!1.34e-08!54;CL:0002371!2.53e-08!118;CL:0000063!4.11e-08!66;CL:0002320!2.00e-07!46;CL:0000134!2.00e-07!46;CL:0000144!2.36e-07!121;CL:0000012!2.36e-07!121;CL:0000548!3.36e-07!115;CL:0000004!3.36e-07!115;CL:0000255!3.36e-07!115|ontology_enrichment_celltype_v019_2=CL:0002031,3.97e-09,25;CL:0000219,7.83e-09,54;CL:0002320,1.42e-07,46;CL:0000134,1.42e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.00e-07!46;UBERON:0002405!2.18e-07!70;UBERON:0002371!9.88e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.42e-07,46;UBERON:0002193,7.78e-07,48;UBERON:0002405,7.78e-07,48;UBERON:0002371,8.77e-07,16|phase1_expression=1.12104192973356,2.09385244583617,1.81999695755814,0.90739263392049,0.500895729946347,3.02182689441402,2.33612640595526,4.77756296733832,4.36445038670167,2.80877431586392,7.0199366972457,5.98291192465023,2.9104124088305,3.93391810885488,5.3297561890506,2.02475267389826,4.19737126876888,3.94327706697797,5.75880621144103,4.66828616977833,14.5424026158329,2.18440092641948,1.82839852397255,3.51983330145495,3.67054849707472,6.31655160526522,4.30761996159075,5.17130958446134,2.85035129184561,2.01624103807945,3.99114919179548,9.52546010189447,5.53558308826113,0,3.46621943701529,3.32469290716985,3.87921776898501,5.02237956884289,4.6880120671428,8.89990364755457,5.29408339227913,5.46436387966757,4.36959317728038,1.88845226963366,1.11514624341466,1.46837401729345,3.12956537739216,6.75877984779384,2.19686182734472,0.58328969722285,3.3596741190087,2.87505128729943,5.87239121202077,2.17608642603403,1.34437519656986,1.80081605225163,2.57880095944881,1.54701627683233,1.41621522601718,1.5869729378161,1.26766280701236,3.72728985276045,1.77858959222228,6.29929802096979,3.9554654502679,11.3676818391376,3.59520132622086,2.30530983192933,2.48855069540346,4.18518408828241,3.57552434297349,2.28520787523043,1.32521124570968,4.16468717330844,2.87536413054709,3.67687514644008,2.20231761998777,1.53224805702225,1.68967186581868,2.1101806036831,1.37231465403614,1.04182674111352,3.07101298901519,1.68828783009504,1.06958773443767,1.47314292736834,1.13897344639282,0.931997229126503,3.48340489332647,1.66257432234928,0.869593466105033,4.30211938490693,5.439770669662,1.07940638327563,1.29955283489534,2.68816132258401,2.66844398250329,0.681721290312231,2.85764605063156,2.12003744706204,1.69012103732017,2.56652954828636,0,0,1.94841936910093,2.02687892380079,3.0331466700887,3.88225191044804,0.776813650941515,1.03909497345377,1.73485326766136,1.21786191324856,1.61430848079241,1.80867168663147,1.52865319276416,2.63899841792318,2.71914464507811,1.01219549843938,1.76922110389975,0.970601099684455,3.3126227769059,2.42437626567611,3.72783522436244,1.75668478206928,1.25668024088073,3.0654846625031,0.958520996047362,1.19980546198682,1.39777249780371,1.04853447583376,2.28750301409313,2.51308704225729,1.73824320192276,1.53429274398198,0.20778804455956,0.811206315338788,0.712875546952214,1.99051152976149,3.28539585963777,1.68353484709179,1.17108398666433,1.60931473103431,1.44049703844279,1.35634336052144,1.29269348387523,2.3060469651273,1.78033276663485,1.55222022443409,1.07783996466421,0.945530400839096,0.351902248327898,0.657587197282725,1.39023624612799,0,0.411564272815887,0.995171334092466,2.1066395619397,1.02939162845886,2.55747149456033,1.44988040774851,1.64168241986767,1.44049649168812,1.65721314909647,1.57411385397923,1.23413690309903,1.16266972375204,2.14618721119695,1.75148013550754,2.30383789878873,1.80584210487005,2.26992666728396,2.33919979880532,1.97595103761946,1.74468344388483,1.89260953707715,1.74937841044784,0.991256348951394,2.11560453330835,0.426576501070468,1.39342003116263,0.644337306610467,1.61346819698674,1.11189021922435,1.14135375667535,2.84717436926707,1.81168850196412,2.5133520880027,1.1937388322469,1.16978452271472,3.59527763461689,2.37751854862164,1.39398891278057,2.0863469104839,1.82797620175566,0,0.407302655690628,2.13347735884388,1.05203729835478,0.822074982615345,0.738050739898011,1.09899109488962,1.48076596706161,1.77871576252289,2.8363667971736,2.16214894624523,1.57403478669398,1.62288097110802,2.17059443777175,1.52775511068852,2.01387296215567,1.78348749452539,2.19649130550465,5.75072826109418,1.86070473834252,2.18426371180192,1.26289438973556,1.97337154874103,1.92977408545347,1.47802552133284,0.757965647081939,1.14075483509418,1.01847051465113,1.40814148973101,0.837531287209079,0.952174563544055,2.34160377429359,1.26108115284953,1.10732344824387,1.59454768657487,1.96635977658886,2.59027472798843,1.59113964439663,10.5553898757491,6.52686820582452,0.983528546038072,1.37968373152366,1.44495530989013,0.586058432961016,1.47541450839008,3.7870639080656,2.52406575533005,0.390438744296638,0.646270193198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| ||
|EntrezGene=54683 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=P99029 | |||
|association_with_transcript=0bp_to_ENSMUST00000025904_5end | |||
|description=CAGE_peak_5_at_Prdx5_5end | |||
|id=chr19:6984578..6984615,- | |||
|ontology_enrichment_celltype=CL:0002031!7.22e-09!25;CL:0000219!1.34e-08!54;CL:0002371!2.53e-08!118;CL:0000063!4.11e-08!66;CL:0002320!2.00e-07!46;CL:0000134!2.00e-07!46;CL:0000144!2.36e-07!121;CL:0000012!2.36e-07!121;CL:0000548!3.36e-07!115;CL:0000004!3.36e-07!115;CL:0000255!3.36e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.97e-09,25;CL:0000219,7.83e-09,54;CL:0002320,1.42e-07,46;CL:0000134,1.42e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.00e-07!46;UBERON:0002405!2.18e-07!70;UBERON:0002371!9.88e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.42e-07,46;UBERON:0002193,7.78e-07,48;UBERON:0002405,7.78e-07,48;UBERON:0002371,8.77e-07,16 | |||
|phase1_expression=1.12104192973356,2.09385244583617,1.81999695755814,0.90739263392049,0.500895729946347,3.02182689441402,2.33612640595526,4.77756296733832,4.36445038670167,2.80877431586392,7.0199366972457,5.98291192465023,2.9104124088305,3.93391810885488,5.3297561890506,2.02475267389826,4.19737126876888,3.94327706697797,5.75880621144103,4.66828616977833,14.5424026158329,2.18440092641948,1.82839852397255,3.51983330145495,3.67054849707472,6.31655160526522,4.30761996159075,5.17130958446134,2.85035129184561,2.01624103807945,3.99114919179548,9.52546010189447,5.53558308826113,0,3.46621943701529,3.32469290716985,3.87921776898501,5.02237956884289,4.6880120671428,8.89990364755457,5.29408339227913,5.46436387966757,4.36959317728038,1.88845226963366,1.11514624341466,1.46837401729345,3.12956537739216,6.75877984779384,2.19686182734472,0.58328969722285,3.3596741190087,2.87505128729943,5.87239121202077,2.17608642603403,1.34437519656986,1.80081605225163,2.57880095944881,1.54701627683233,1.41621522601718,1.5869729378161,1.26766280701236,3.72728985276045,1.77858959222228,6.29929802096979,3.9554654502679,11.3676818391376,3.59520132622086,2.30530983192933,2.48855069540346,4.18518408828241,3.57552434297349,2.28520787523043,1.32521124570968,4.16468717330844,2.87536413054709,3.67687514644008,2.20231761998777,1.53224805702225,1.68967186581868,2.1101806036831,1.37231465403614,1.04182674111352,3.07101298901519,1.68828783009504,1.06958773443767,1.47314292736834,1.13897344639282,0.931997229126503,3.48340489332647,1.66257432234928,0.869593466105033,4.30211938490693,5.439770669662,1.07940638327563,1.29955283489534,2.68816132258401,2.66844398250329,0.681721290312231,2.85764605063156,2.12003744706204,1.69012103732017,2.56652954828636,0,0,1.94841936910093,2.02687892380079,3.0331466700887,3.88225191044804,0.776813650941515,1.03909497345377,1.73485326766136,1.21786191324856,1.61430848079241,1.80867168663147,1.52865319276416,2.63899841792318,2.71914464507811,1.01219549843938,1.76922110389975,0.970601099684455,3.3126227769059,2.42437626567611,3.72783522436244,1.75668478206928,1.25668024088073,3.0654846625031,0.958520996047362,1.19980546198682,1.39777249780371,1.04853447583376,2.28750301409313,2.51308704225729,1.73824320192276,1.53429274398198,0.20778804455956,0.811206315338788,0.712875546952214,1.99051152976149,3.28539585963777,1.68353484709179,1.17108398666433,1.60931473103431,1.44049703844279,1.35634336052144,1.29269348387523,2.3060469651273,1.78033276663485,1.55222022443409,1.07783996466421,0.945530400839096,0.351902248327898,0.657587197282725,1.39023624612799,0,0.411564272815887,0.995171334092466,2.1066395619397,1.02939162845886,2.55747149456033,1.44988040774851,1.64168241986767,1.44049649168812,1.65721314909647,1.57411385397923,1.23413690309903,1.16266972375204,2.14618721119695,1.75148013550754,2.30383789878873,1.80584210487005,2.26992666728396,2.33919979880532,1.97595103761946,1.74468344388483,1.89260953707715,1.74937841044784,0.991256348951394,2.11560453330835,0.426576501070468,1.39342003116263,0.644337306610467,1.61346819698674,1.11189021922435,1.14135375667535,2.84717436926707,1.81168850196412,2.5133520880027,1.1937388322469,1.16978452271472,3.59527763461689,2.37751854862164,1.39398891278057,2.0863469104839,1.82797620175566,0,0.407302655690628,2.13347735884388,1.05203729835478,0.822074982615345,0.738050739898011,1.09899109488962,1.48076596706161,1.77871576252289,2.8363667971736,2.16214894624523,1.57403478669398,1.62288097110802,2.17059443777175,1.52775511068852,2.01387296215567,1.78348749452539,2.19649130550465,5.75072826109418,1.86070473834252,2.18426371180192,1.26289438973556,1.97337154874103,1.92977408545347,1.47802552133284,0.757965647081939,1.14075483509418,1.01847051465113,1.40814148973101,0.837531287209079,0.952174563544055,2.34160377429359,1.26108115284953,1.10732344824387,1.59454768657487,1.96635977658886,2.59027472798843,1.59113964439663,10.5553898757491,6.52686820582452,0.983528546038072,1.37968373152366,1.44495530989013,0.586058432961016,1.47541450839008,3.7870639080656,2.52406575533005,0.390438744296638,0.646270193198397,0.955875191810208,2.22798674082394,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,2.89189184779626,1.41940085208269,0.890328018336276,0.977321756121456,2.14461159864296,3.98235415019888,2.18502572539483,0.604647113929502,1.88605079755898,1.47650946440386,2.76691633149535,1.29214146584111,1.45413491791002,1.06949213515416,0.948110273807448,2.10837217149998,2.06271086496374,2.38307724027652,1.26042765821917,0.776152102696527,1.07168517515796,0.177340233642274,0.891844088010353,1.15184314421485,1.522324745573,1.87737366450968,3.38931313382112,2.64634077665954,1.81374878235628,0.968786560175433,2.0506394475573,2.26807453605959,1.47726809770555,1.7488850197791,1.11255181206306,1.87957968877638,2.47664241555867,1.66675074632741,2.0720530270516,3.2806614653046,2.51655990527175,0.679913719975421,0.559805809294632,1.38199973804424,2.86401185404534,0.790839983952838,1.21991680276109,0.54002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| |||
|short_description=p5@Prdx5 | |||
}} |
Revision as of 18:23, 13 September 2013
Short description: | p5@Prdx5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Prdx5_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000025904_5end |
EntrezGene: | Prdx5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.97e-09 | 25 |
motile cell | 7.83e-09 | 54 |
connective tissue cell | 1.42e-07 | 46 |
mesenchymal cell | 1.42e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.42e-07 | 46 |
hemolymphoid system | 7.78e-07 | 48 |
immune system | 7.78e-07 | 48 |
bone marrow | 8.77e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.