FFCP PHASE1:Mm9::chr19:6015769..6015830,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12333|HGNC=|MCL_coexpression_id=3|UniProt=O35350,Q3TB79,Q3TI07,Q3UF24|association_with_transcript=0bp_to_ENSMUST00000164843,NM_001110504,uc008ggk.2_5end|description=CAGE_peak_2_at_Capn1_5end|id=chr19:6015769..6015830,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!4.06e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.06e-07,32|phase1_expression=10.2495262147068,4.53668029931169,6.82498859084304,18.4503168897166,15.5277676283368,8.39396359559449,7.70921713965235,15.4947988129892,1.12630977721333,1.87251621057595,1.02730780935303,0.239316476986009,11.4704489053908,9.00430144915673,6.32908547449759,6.07425802169478,4.19737126876888,12.3030244489713,13.4372144933624,8.91218268775863,3.57181818634493,8.53902180327614,4.96279599363977,11.1994695955385,11.4704640533585,2.8711598205751,7.32295393470427,7.97243560937789,77.3395317187442,24.6989527164732,8.64748991555688,8.89042942843484,6.76571266343027,0,3.46621943701529,6.98185510505668,6.53341940039581,114.259135191176,71.1015163516658,68.0580867165938,121.76391802242,137.292142476648,94.674518841075,11.2048167998264,9.0225468785368,12.2976323948327,35.9900018400098,18.3141131359575,22.4079906389161,17.8875507148341,18.3382212329225,24.4379359420452,10.9058693937529,10.1550699881588,18.4851589528355,13.1202312378333,10.3152038377952,12.3761302146586,1.61853168687678,1.5869729378161,1.90149421051854,39.3059657200193,29.3467282716676,7.19919773825119,14.8329954385046,14.209602298922,13.1824048628098,18.4424786554346,0.725827286159344,0.405017814995072,0.420649922702764,5.99867067247988,4.8591079009355,0.244981598429908,0.191690942036473,0.919218786610021,8.8092704799511,6.89511625660014,5.83704826373725,1.05509030184155,1.64677758484337,1.04182674111352,6.70039197603314,4.50210088025344,4.12555268997387,5.00868595305235,3.27454865837937,3.35519002485541,4.69502398665741,10.6555899750568,4.92769630792852,2.58127163094416,0,3.77792234146472,5.19821133958135,3.13618820968135,10.2524426696179,16.7021716126497,15.3273742715693,13.0735642568826,10.563256483251,7.69958864485907,7.64415719119937,0,8.22665955842614,11.4011939463794,6.57181778519218,5.48082622651488,11.1343289968284,7.71899123137089,3.46970653532272,6.69824052286711,5.30415643688935,5.27529241934179,5.29149182110672,4.90099706185734,6.42706916109372,8.38676270135488,15.9229899350977,8.25010934731787,9.93786833071771,6.78825354389311,27.9587641827183,3.22058876712702,8.3778682725382,12.0064815948038,3.35482348616577,5.99902730993408,4.44745794755726,4.94309110035915,3.20250421973039,0.376963056338593,8.16974304903699,3.83573185995496,5.81806524766768,2.92034273521964,7.73979165262404,14.9288364732112,21.4814344668623,3.15662783829711,1.56144531555244,2.75882525320168,3.24111833649629,4.52114453507145,3.6739709541717,4.22775276940004,2.62364828767241,7.24369438069244,1.5089759505299,2.26927296201383,4.92663147659057,5.91828477554452,6.39508673218875,8.358051996532,7.81972118350185,2.18937693500343,4.91549231119264,4.88961023517959,5.11494298912067,2.89976081549703,3.51789089971644,5.22179978236943,7.33908680314152,4.52557733019029,4.01094493507183,4.65067889500816,3.48755421819505,5.7215017759913,9.70903114489535,7.55170334763838,9.80932595504854,9.35679919522127,7.46470391989572,11.0049263383505,5.25724871410318,2.6755199218614,7.59963200862735,7.1401652999157,1.91959425481711,2.09013004674395,2.57734922644187,2.01683524623343,3.7804267453628,4.56541502670142,12.3377556001573,7.24675400785648,9.80207314321051,11.1415624343044,15.0122347081723,7.19055526923377,12.3198688428576,10.9527700289902,2.46568271239006,3.65595240351132,1.1270773567308,4.07302655690629,6.59438456369928,5.11991485199326,5.75452487830741,4.28069429140846,5.49495547444812,4.07210640941942,2.96452627087149,5.17219827719892,6.6830058338489,7.19558759631532,7.50582449137461,10.1294407096015,7.38414970166117,5.4662266115654,3.56697498905078,4.94210543738547,4.31304619582064,4.83783231969054,1.87222603868736,3.03094653536534,3.40855085691633,3.37710464954357,11.0851914099963,2.27389694124582,2.60743962307241,2.03694102930226,4.69380496577004,5.52770649557992,8.56957107189649,8.78101415360095,13.3989872490262,16.8313164133069,13.7131101045439,16.2224681568581,14.6782234586011,14.4649058581512,12.0633027151418,5.4390568381871,6.39293554924747,5.79467167239938,17.6605648986571,7.97039468826982,7.37707254195039,13.8859009962405,2.83957397474631,3.51394869866975,3.44677436372478,3.82350076724083,2.22798674082394,1.69845918473299,3.23848561339915,3.21481443702443,3.55759000151871,1.92792789853084,7.2389443456217,6.94455854302295,7.81857404897165,10.7230579932148,3.98235415019888,2.6705869977048,1.209294227859,2.26326095707078,9.44966057218473,5.22639751504677,5.42699415653264,3.27180356529755,7.12994756769443,5.37262488490887,2.10837217149998,2.06271086496374,5.7874732978144,0.720244376125241,2.199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| ||
|EntrezGene=12333 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=O35350,Q3TB79,Q3TI07,Q3UF24 | |||
|association_with_transcript=0bp_to_ENSMUST00000164843,NM_001110504,uc008ggk.2_5end | |||
|description=CAGE_peak_2_at_Capn1_5end | |||
|id=chr19:6015769..6015830,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.06e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.06e-07,32 | |||
|phase1_expression=10.2495262147068,4.53668029931169,6.82498859084304,18.4503168897166,15.5277676283368,8.39396359559449,7.70921713965235,15.4947988129892,1.12630977721333,1.87251621057595,1.02730780935303,0.239316476986009,11.4704489053908,9.00430144915673,6.32908547449759,6.07425802169478,4.19737126876888,12.3030244489713,13.4372144933624,8.91218268775863,3.57181818634493,8.53902180327614,4.96279599363977,11.1994695955385,11.4704640533585,2.8711598205751,7.32295393470427,7.97243560937789,77.3395317187442,24.6989527164732,8.64748991555688,8.89042942843484,6.76571266343027,0,3.46621943701529,6.98185510505668,6.53341940039581,114.259135191176,71.1015163516658,68.0580867165938,121.76391802242,137.292142476648,94.674518841075,11.2048167998264,9.0225468785368,12.2976323948327,35.9900018400098,18.3141131359575,22.4079906389161,17.8875507148341,18.3382212329225,24.4379359420452,10.9058693937529,10.1550699881588,18.4851589528355,13.1202312378333,10.3152038377952,12.3761302146586,1.61853168687678,1.5869729378161,1.90149421051854,39.3059657200193,29.3467282716676,7.19919773825119,14.8329954385046,14.209602298922,13.1824048628098,18.4424786554346,0.725827286159344,0.405017814995072,0.420649922702764,5.99867067247988,4.8591079009355,0.244981598429908,0.191690942036473,0.919218786610021,8.8092704799511,6.89511625660014,5.83704826373725,1.05509030184155,1.64677758484337,1.04182674111352,6.70039197603314,4.50210088025344,4.12555268997387,5.00868595305235,3.27454865837937,3.35519002485541,4.69502398665741,10.6555899750568,4.92769630792852,2.58127163094416,0,3.77792234146472,5.19821133958135,3.13618820968135,10.2524426696179,16.7021716126497,15.3273742715693,13.0735642568826,10.563256483251,7.69958864485907,7.64415719119937,0,8.22665955842614,11.4011939463794,6.57181778519218,5.48082622651488,11.1343289968284,7.71899123137089,3.46970653532272,6.69824052286711,5.30415643688935,5.27529241934179,5.29149182110672,4.90099706185734,6.42706916109372,8.38676270135488,15.9229899350977,8.25010934731787,9.93786833071771,6.78825354389311,27.9587641827183,3.22058876712702,8.3778682725382,12.0064815948038,3.35482348616577,5.99902730993408,4.44745794755726,4.94309110035915,3.20250421973039,0.376963056338593,8.16974304903699,3.83573185995496,5.81806524766768,2.92034273521964,7.73979165262404,14.9288364732112,21.4814344668623,3.15662783829711,1.56144531555244,2.75882525320168,3.24111833649629,4.52114453507145,3.6739709541717,4.22775276940004,2.62364828767241,7.24369438069244,1.5089759505299,2.26927296201383,4.92663147659057,5.91828477554452,6.39508673218875,8.358051996532,7.81972118350185,2.18937693500343,4.91549231119264,4.88961023517959,5.11494298912067,2.89976081549703,3.51789089971644,5.22179978236943,7.33908680314152,4.52557733019029,4.01094493507183,4.65067889500816,3.48755421819505,5.7215017759913,9.70903114489535,7.55170334763838,9.80932595504854,9.35679919522127,7.46470391989572,11.0049263383505,5.25724871410318,2.6755199218614,7.59963200862735,7.1401652999157,1.91959425481711,2.09013004674395,2.57734922644187,2.01683524623343,3.7804267453628,4.56541502670142,12.3377556001573,7.24675400785648,9.80207314321051,11.1415624343044,15.0122347081723,7.19055526923377,12.3198688428576,10.9527700289902,2.46568271239006,3.65595240351132,1.1270773567308,4.07302655690629,6.59438456369928,5.11991485199326,5.75452487830741,4.28069429140846,5.49495547444812,4.07210640941942,2.96452627087149,5.17219827719892,6.6830058338489,7.19558759631532,7.50582449137461,10.1294407096015,7.38414970166117,5.4662266115654,3.56697498905078,4.94210543738547,4.31304619582064,4.83783231969054,1.87222603868736,3.03094653536534,3.40855085691633,3.37710464954357,11.0851914099963,2.27389694124582,2.60743962307241,2.03694102930226,4.69380496577004,5.52770649557992,8.56957107189649,8.78101415360095,13.3989872490262,16.8313164133069,13.7131101045439,16.2224681568581,14.6782234586011,14.4649058581512,12.0633027151418,5.4390568381871,6.39293554924747,5.79467167239938,17.6605648986571,7.97039468826982,7.37707254195039,13.8859009962405,2.83957397474631,3.51394869866975,3.44677436372478,3.82350076724083,2.22798674082394,1.69845918473299,3.23848561339915,3.21481443702443,3.55759000151871,1.92792789853084,7.2389443456217,6.94455854302295,7.81857404897165,10.7230579932148,3.98235415019888,2.6705869977048,1.209294227859,2.26326095707078,9.44966057218473,5.22639751504677,5.42699415653264,3.27180356529755,7.12994756769443,5.37262488490887,2.10837217149998,2.06271086496374,5.7874732978144,0.720244376125241,2.19909762430683,3.64372959553707,3.01478397191865,3.74574516964348,7.24015690649332,9.43841342255258,41.5368923272767,16.3110694565142,52.9268155331909,9.72828892354732,7.10443477461984,9.288190438936,10.7435109602823,12.9671310798598,11.659233465194,17.2445530869774,10.7648654902647,9.08102219038179,9.81530995059472,7.91147519419702,12.1657862671712,8.92234875505438,5.26933132980952,6.15786390224095,6.21899882119907,7.63736494412091,1.42351197111511,6.09958401380546,5.4002670410900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| |||
|short_description=p2@Capn1 | |||
}} | |||
Revision as of 18:17, 13 September 2013
| Short description: | p2@Capn1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Capn1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3 |
| Association with transcript: | 0bp_to_ENSMUST00000164843, NM_001110504, uc008ggk.2_5end |
| EntrezGene: | Capn1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 4.06e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
