FFCP PHASE1:Mm9::chr19:56622503..56622536,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=55947|HGNC=|UniProt=G5E855,Q9JIC3|association_with_transcript=0bp_to_ENSMUST00000026063,uc008hza.1_5end|description=CAGE_peak_1_at_Dclre1a_5end|id=chr19:56622503..56622536,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!5.67e-09!79;UBERON:0002100!3.60e-08!98;UBERON:0009569!5.95e-08!66;UBERON:0005177!2.21e-07!85;UBERON:0000464!2.54e-07!57;UBERON:0000926!3.26e-07!193;UBERON:0004120!3.26e-07!193;UBERON:0006603!3.26e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.10e-09,90;UBERON:0005177,7.93e-09,79;UBERON:0009569,6.08e-08,66|phase1_expression=4.96461426024861,0.697950815278722,0.454999239389536,1.81478526784098,1.00179145989269,1.17515490338323,1.16806320297763,3.35720640948098,0.140788722151667,0.234064526321993,1.36974374580404,2.23362045186942,1.36960583944965,0.961624426608971,2.6648780945253,3.64455481301687,4.19737126876888,1.89277299214943,2.05671650408608,2.54633791078818,3.57181818634493,1.09220046320974,1.82839852397255,3.03985603307473,0.91763712426868,1.14846392823004,0.86152399231815,1.50829862880122,3.23039813075836,1.76421090831952,1.10865255327652,2.54012269383853,0,0,4.62162591602039,3.82339684324532,3.87921776898501,6.69650609179052,6.2506827561904,3.14114246384279,1.17646297606203,3.41522742479223,3.88408282424923,6.42073771675444,6.08261587317087,4.9557623083654,0.782391344348039,0.218025156380447,0.439372365468944,1.74986909166855,1.1198913730029,0,0.503347818173209,0,0.336093799142464,2.82985379639542,2.29226751951005,2.57836046138721,2.42779753031517,2.11596391708813,1.90149421051854,0.677689064138264,0,0.449949858640699,1.97773272513395,0,0.299600110518405,0.384218305321555,1.65903379693564,2.43010688997043,0.841299845405528,2.57085885963423,1.98781686856452,3.06226998037385,2.30029130443767,2.75765635983006,1.10115880999389,1.78762273319263,1.38245879930619,1.31886287730194,2.10421580285542,3.12548022334056,2.51264699101243,1.12552522006336,2.75036845998258,3.24091444021034,2.98980529678116,2.05039390407831,4.01348824665875,3.92972112555285,6.37701875143691,1.72084775396277,0.679971333707751,1.07940638327563,5.19821133958135,6.2723764193627,3.7919993435573,11.759692257886,3.11743205523443,7.77347063922748,2.11265129665021,10.2661181931454,10.1922095882658,0,1.08245520505607,2.02687892380079,1.01104889002957,3.19714863213368,5.69663344023778,3.56261133755579,2.08182392119363,3.34912026143355,2.99800146432876,4.82312449768392,5.99702406392095,5.40366342717605,4.94389935468748,6.65157041831594,5.30766331169925,2.58826959915855,4.19598885074748,7.75800405016355,5.59175283654366,5.27005434620785,3.77004072264219,3.0654846625031,1.67741174308288,1.79970819298022,1.65191295194984,1.79748767285787,1.37250180845588,2.76439574648302,3.47648640384553,3.06858548796397,3.32460871295296,3.0825839982874,3.66621709861139,6.22034853050465,7.32895999457657,9.89076722666428,3.6433724029557,3.67843367093557,5.04173963454978,6.78171680260718,5.71506592871154,7.55870949680614,4.59138450342671,9.05461797586555,3.23351989399263,4.16033376369202,2.63926686245923,4.3839146485515,7.50727572909114,4.87553033131033,4.7329891373827,4.57778813682534,3.51106593656617,1.02939162845886,3.40996199274711,4.34964122324554,3.75241695969754,4.14142741360334,3.55117103377815,3.54175617145327,4.47374627373397,3.72054311600653,4.56064782379353,4.08678698285093,2.96207729844265,8.53670813211295,5.10733500138891,4.5321996101853,5.04965265169416,5.90508242545636,2.73376933133365,3.19004298375782,1.32167513193519,2.11560453330835,3.19932375802851,2.55460339046482,2.96395161040815,4.43703754171354,5.78182913996663,5.70676878337677,0.949058123089023,2.79988223030818,4.02136334080431,5.76973768919337,3.50935356814416,1.79763881730844,3.6743468478698,3.78368419183298,2.46568271239006,4.56994050438915,3.38123207019241,3.05476991767971,5.23671715352589,4.9095073923223,6.13394410105296,5.16635517928608,7.06494275286187,6.29325536001183,5.92905254174298,4.33797274861845,6.2898878436225,3.14806957338795,3.85434230638156,6.27060615356284,3.8193877767213,4.02774592431135,5.18832725680113,4.11842119782122,10.0637744569148,3.72140947668503,7.80094182786401,6.56705082662491,3.40855085691633,3.37710464954357,8.68339993783042,3.03186258832776,4.4000543639347,4.2436271443797,3.98973422090454,5.3602002381381,7.61739650835244,6.24427673144956,4.88668946729192,5.3151525515706,4.78364305972461,8.1931657357869,6.56202931090403,7.66640010482011,1.50791283939272,2.71952841909355,3.93411418415229,6.89841865761831,4.81651769963376,2.46144541843627,6.72133276044369,3.7870639080656,3.78609863299508,3.12350995437311,6.67812532971677,5.9742199488138,4.90157082981267,3.67999490025482,1.61924280669958,3.21481443702443,7.90575555893047,3.85585579706168,7.52282451603824,4.09550888434687,3.58351310577867,5.93892442701128,3.98235415019888,4.12727081463468,3.02323556964751,5.65815239267694,3.83892460745005,6.1487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| ||
|EntrezGene=55947 | |||
|HGNC= | |||
|UniProt=G5E855,Q9JIC3 | |||
|association_with_transcript=0bp_to_ENSMUST00000026063,uc008hza.1_5end | |||
|description=CAGE_peak_1_at_Dclre1a_5end | |||
|id=chr19:56622503..56622536,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!5.67e-09!79;UBERON:0002100!3.60e-08!98;UBERON:0009569!5.95e-08!66;UBERON:0005177!2.21e-07!85;UBERON:0000464!2.54e-07!57;UBERON:0000926!3.26e-07!193;UBERON:0004120!3.26e-07!193;UBERON:0006603!3.26e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.10e-09,90;UBERON:0005177,7.93e-09,79;UBERON:0009569,6.08e-08,66 | |||
|phase1_expression=4.96461426024861,0.697950815278722,0.454999239389536,1.81478526784098,1.00179145989269,1.17515490338323,1.16806320297763,3.35720640948098,0.140788722151667,0.234064526321993,1.36974374580404,2.23362045186942,1.36960583944965,0.961624426608971,2.6648780945253,3.64455481301687,4.19737126876888,1.89277299214943,2.05671650408608,2.54633791078818,3.57181818634493,1.09220046320974,1.82839852397255,3.03985603307473,0.91763712426868,1.14846392823004,0.86152399231815,1.50829862880122,3.23039813075836,1.76421090831952,1.10865255327652,2.54012269383853,0,0,4.62162591602039,3.82339684324532,3.87921776898501,6.69650609179052,6.2506827561904,3.14114246384279,1.17646297606203,3.41522742479223,3.88408282424923,6.42073771675444,6.08261587317087,4.9557623083654,0.782391344348039,0.218025156380447,0.439372365468944,1.74986909166855,1.1198913730029,0,0.503347818173209,0,0.336093799142464,2.82985379639542,2.29226751951005,2.57836046138721,2.42779753031517,2.11596391708813,1.90149421051854,0.677689064138264,0,0.449949858640699,1.97773272513395,0,0.299600110518405,0.384218305321555,1.65903379693564,2.43010688997043,0.841299845405528,2.57085885963423,1.98781686856452,3.06226998037385,2.30029130443767,2.75765635983006,1.10115880999389,1.78762273319263,1.38245879930619,1.31886287730194,2.10421580285542,3.12548022334056,2.51264699101243,1.12552522006336,2.75036845998258,3.24091444021034,2.98980529678116,2.05039390407831,4.01348824665875,3.92972112555285,6.37701875143691,1.72084775396277,0.679971333707751,1.07940638327563,5.19821133958135,6.2723764193627,3.7919993435573,11.759692257886,3.11743205523443,7.77347063922748,2.11265129665021,10.2661181931454,10.1922095882658,0,1.08245520505607,2.02687892380079,1.01104889002957,3.19714863213368,5.69663344023778,3.56261133755579,2.08182392119363,3.34912026143355,2.99800146432876,4.82312449768392,5.99702406392095,5.40366342717605,4.94389935468748,6.65157041831594,5.30766331169925,2.58826959915855,4.19598885074748,7.75800405016355,5.59175283654366,5.27005434620785,3.77004072264219,3.0654846625031,1.67741174308288,1.79970819298022,1.65191295194984,1.79748767285787,1.37250180845588,2.76439574648302,3.47648640384553,3.06858548796397,3.32460871295296,3.0825839982874,3.66621709861139,6.22034853050465,7.32895999457657,9.89076722666428,3.6433724029557,3.67843367093557,5.04173963454978,6.78171680260718,5.71506592871154,7.55870949680614,4.59138450342671,9.05461797586555,3.23351989399263,4.16033376369202,2.63926686245923,4.3839146485515,7.50727572909114,4.87553033131033,4.7329891373827,4.57778813682534,3.51106593656617,1.02939162845886,3.40996199274711,4.34964122324554,3.75241695969754,4.14142741360334,3.55117103377815,3.54175617145327,4.47374627373397,3.72054311600653,4.56064782379353,4.08678698285093,2.96207729844265,8.53670813211295,5.10733500138891,4.5321996101853,5.04965265169416,5.90508242545636,2.73376933133365,3.19004298375782,1.32167513193519,2.11560453330835,3.19932375802851,2.55460339046482,2.96395161040815,4.43703754171354,5.78182913996663,5.70676878337677,0.949058123089023,2.79988223030818,4.02136334080431,5.76973768919337,3.50935356814416,1.79763881730844,3.6743468478698,3.78368419183298,2.46568271239006,4.56994050438915,3.38123207019241,3.05476991767971,5.23671715352589,4.9095073923223,6.13394410105296,5.16635517928608,7.06494275286187,6.29325536001183,5.92905254174298,4.33797274861845,6.2898878436225,3.14806957338795,3.85434230638156,6.27060615356284,3.8193877767213,4.02774592431135,5.18832725680113,4.11842119782122,10.0637744569148,3.72140947668503,7.80094182786401,6.56705082662491,3.40855085691633,3.37710464954357,8.68339993783042,3.03186258832776,4.4000543639347,4.2436271443797,3.98973422090454,5.3602002381381,7.61739650835244,6.24427673144956,4.88668946729192,5.3151525515706,4.78364305972461,8.1931657357869,6.56202931090403,7.66640010482011,1.50791283939272,2.71952841909355,3.93411418415229,6.89841865761831,4.81651769963376,2.46144541843627,6.72133276044369,3.7870639080656,3.78609863299508,3.12350995437311,6.67812532971677,5.9742199488138,4.90157082981267,3.67999490025482,1.61924280669958,3.21481443702443,7.90575555893047,3.85585579706168,7.52282451603824,4.09550888434687,3.58351310577867,5.93892442701128,3.98235415019888,4.12727081463468,3.02323556964751,5.65815239267694,3.83892460745005,6.14870295887855,3.35956781118687,6.5436071305951,9.26893183800275,3.47640433729398,3.16255825724996,3.09406629744561,8.5109901438447,1.8006109403131,2.19909762430683,1.28602221018955,3.90148514013002,3.21063871683727,3.78462747384878,1.8267896946876,4.4587624532105,4.87213762986786,3.74898276693435,3.95727007059552,6.45857706783622,5.54878909339034,5.61050016814741,4.92422699235184,4.08073171281791,3.15223013417866,3.93003025835061,5.36605856704379,5.18544676635193,6.96963290917357,6.97140561377228,5.94823250336959,2.03974115992626,1.81936888020755,1.79659965945751,2.86401185404534,4.11236791655476,5.28630614529807,4.42821897369385,4.18176592028937,4.36725127492355,4.5853877770839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| |||
|short_description=p1@Dclre1a | |||
}} | |||
Revision as of 18:09, 13 September 2013
| Short description: | p1@Dclre1a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Dclre1a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000026063, uc008hza.1_5end |
| EntrezGene: | Dclre1a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk | 1.10e-09 | 90 |
| trunk region element | 7.93e-09 | 79 |
| subdivision of trunk | 6.08e-08 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
