FFCP PHASE1:Mm9::chr19:53674495..53674503,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=480|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:53674495..53674503,-|id=chr19:53674495..53674503,-|ontology_enrichment_celltype=CL:0000063!2.39e-12!66;CL:0000988!1.34e-10!32;CL:0002032!1.34e-10!32;CL:0000037!1.34e-10!32;CL:0000566!1.34e-10!32;CL:0000837!1.34e-10!32;CL:0000144!9.12e-10!121;CL:0000012!9.12e-10!121;CL:0002371!4.85e-09!118;CL:0000838!7.08e-09!12;CL:0002031!7.30e-09!25;CL:0002563!8.40e-09!9;CL:0002251!8.40e-09!9;CL:0000791!1.07e-08!9;CL:0000789!1.07e-08!9;CL:0002420!1.07e-08!9;CL:0002419!1.07e-08!9;CL:0000790!1.07e-08!9;CL:0000548!2.04e-08!115;CL:0000004!2.04e-08!115;CL:0000255!2.04e-08!115;CL:0000084!4.02e-08!11;CL:0000827!4.02e-08!11;CL:0000624!5.76e-08!8;CL:0000542!7.37e-08!13;CL:0000051!7.37e-08!13;CL:0002320!5.12e-07!46;CL:0000134!5.12e-07!46|ontology_enrichment_celltype_v019_2=CL:0000988,5.94e-19,32;CL:0002032,5.94e-19,32;CL:0000037,5.94e-19,32;CL:0000837,5.94e-19,32;CL:0000791,1.16e-18,9;CL:0000789,1.16e-18,9;CL:0002420,1.16e-18,9;CL:0002419,1.16e-18,9;CL:0000790,1.16e-18,9;CL:0002031,1.98e-18,25;CL:0002563,3.47e-18,9;CL:0002251,3.47e-18,9;CL:0000838,1.14e-17,12;CL:0000542,3.19e-16,13;CL:0000051,3.19e-16,13;CL:0000624,5.37e-16,8;CL:0000084,4.13e-15,11;CL:0000827,4.13e-15,11;CL:0002320,1.92e-14,46;CL:0000134,1.92e-14,46;CL:0002076,1.49e-13,15;CL:0000223,1.22e-12,20;CL:0000764,3.34e-12,3;CL:0000765,3.34e-12,3;CL:0000038,3.34e-12,3;CL:0000547,3.34e-12,3;CL:0000738,3.95e-12,17;CL:0002087,3.95e-12,17;CL:0000219,7.25e-12,54;CL:0002250,4.48e-11,3;CL:0000893,6.27e-10,6;CL:0002489,6.27e-10,6;CL:0000898,6.27e-10,6;CL:0000809,6.27e-10,6;CL:0000810,6.27e-10,6;CL:0000895,6.27e-10,6;CL:0000808,6.27e-10,6;CL:0000894,6.27e-10,6;CL:0000806,6.27e-10,6;CL:0000807,6.27e-10,6;CL:0000805,6.27e-10,6;CL:0002425,6.27e-10,6;CL:0002436,6.27e-10,6;CL:0002427,6.27e-10,6;CL:0002428,6.27e-10,6;CL:0002429,6.27e-10,6;CL:0002433,6.27e-10,6;CL:0002431,6.27e-10,6;CL:0002432,6.27e-10,6;CL:0000066,8.01e-10,25;CL:0000034,1.67e-09,97;CL:0000239,1.77e-09,6;CL:0000677,1.77e-09,6;CL:0000584,1.77e-09,6;CL:0000723,3.99e-09,91;CL:0000048,3.99e-09,91;CL:0000075,3.91e-08,7;CL:0000050,9.52e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,3.34e-12,3;DOID:0060083,3.34e-12,3;DOID:1240,3.34e-12,3|ontology_enrichment_uberon=UBERON:0003350!8.40e-09!9;UBERON:0004808!8.40e-09!9;UBERON:0001277!8.40e-09!9;UBERON:0000485!5.52e-08!11;UBERON:0002384!5.12e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.47e-18,9;UBERON:0004808,3.47e-18,9;UBERON:0001277,3.47e-18,9;UBERON:0000485,1.00e-14,11;UBERON:0002384,1.92e-14,46;UBERON:0001242,2.50e-12,13;UBERON:0001262,2.50e-12,13;UBERON:0004786,2.50e-12,13;UBERON:0000344,1.44e-10,15;UBERON:0003929,4.41e-07,55|phase1_expression=0,2.09385244583617,1.81999695755814,3.0246421130683,2.50447864973174,0.839396359559449,0.934450562382103,6.19791952519566,2.111830832275,3.04283884218592,0.513653904676515,0.478632953972018,6.33442700745461,3.93391810885488,0,0.404950534779652,1.39912375625629,0.630924330716475,0.274228867211478,0,0,0.595745707205312,0,0,0,0,0.86152399231815,0.215471232685889,0,0,0,10.7955214488137,6.1506478758457,15.8481681015439,3.17736781726402,1.16364251750945,4.49172583777212,0.837063261473815,0,0.523523743973798,1.76469446409304,1.36609096991689,0.485510353031154,0,0.405507724878058,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,1.17447824240415,2.90144856804538,1.00828139742739,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,5.50742528533188,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,1.01343946190039,0.505524445014783,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,1.31796636956512,1.19980546198682,0.762421362438388,0,0,0,0,0.255715457330331,0,0.324482526135515,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0.257347907114715,0.568326998791185,0,0,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.584511715822624,0,0,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0.619160603889667,0.185194527369712,0,0.27338845544205,0.228778173206523,0,1.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=480 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:53674495..53674503,- | |||
|id=chr19:53674495..53674503,- | |||
|ontology_enrichment_celltype=CL:0000063!2.39e-12!66;CL:0000988!1.34e-10!32;CL:0002032!1.34e-10!32;CL:0000037!1.34e-10!32;CL:0000566!1.34e-10!32;CL:0000837!1.34e-10!32;CL:0000144!9.12e-10!121;CL:0000012!9.12e-10!121;CL:0002371!4.85e-09!118;CL:0000838!7.08e-09!12;CL:0002031!7.30e-09!25;CL:0002563!8.40e-09!9;CL:0002251!8.40e-09!9;CL:0000791!1.07e-08!9;CL:0000789!1.07e-08!9;CL:0002420!1.07e-08!9;CL:0002419!1.07e-08!9;CL:0000790!1.07e-08!9;CL:0000548!2.04e-08!115;CL:0000004!2.04e-08!115;CL:0000255!2.04e-08!115;CL:0000084!4.02e-08!11;CL:0000827!4.02e-08!11;CL:0000624!5.76e-08!8;CL:0000542!7.37e-08!13;CL:0000051!7.37e-08!13;CL:0002320!5.12e-07!46;CL:0000134!5.12e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.94e-19,32;CL:0002032,5.94e-19,32;CL:0000037,5.94e-19,32;CL:0000837,5.94e-19,32;CL:0000791,1.16e-18,9;CL:0000789,1.16e-18,9;CL:0002420,1.16e-18,9;CL:0002419,1.16e-18,9;CL:0000790,1.16e-18,9;CL:0002031,1.98e-18,25;CL:0002563,3.47e-18,9;CL:0002251,3.47e-18,9;CL:0000838,1.14e-17,12;CL:0000542,3.19e-16,13;CL:0000051,3.19e-16,13;CL:0000624,5.37e-16,8;CL:0000084,4.13e-15,11;CL:0000827,4.13e-15,11;CL:0002320,1.92e-14,46;CL:0000134,1.92e-14,46;CL:0002076,1.49e-13,15;CL:0000223,1.22e-12,20;CL:0000764,3.34e-12,3;CL:0000765,3.34e-12,3;CL:0000038,3.34e-12,3;CL:0000547,3.34e-12,3;CL:0000738,3.95e-12,17;CL:0002087,3.95e-12,17;CL:0000219,7.25e-12,54;CL:0002250,4.48e-11,3;CL:0000893,6.27e-10,6;CL:0002489,6.27e-10,6;CL:0000898,6.27e-10,6;CL:0000809,6.27e-10,6;CL:0000810,6.27e-10,6;CL:0000895,6.27e-10,6;CL:0000808,6.27e-10,6;CL:0000894,6.27e-10,6;CL:0000806,6.27e-10,6;CL:0000807,6.27e-10,6;CL:0000805,6.27e-10,6;CL:0002425,6.27e-10,6;CL:0002436,6.27e-10,6;CL:0002427,6.27e-10,6;CL:0002428,6.27e-10,6;CL:0002429,6.27e-10,6;CL:0002433,6.27e-10,6;CL:0002431,6.27e-10,6;CL:0002432,6.27e-10,6;CL:0000066,8.01e-10,25;CL:0000034,1.67e-09,97;CL:0000239,1.77e-09,6;CL:0000677,1.77e-09,6;CL:0000584,1.77e-09,6;CL:0000723,3.99e-09,91;CL:0000048,3.99e-09,91;CL:0000075,3.91e-08,7;CL:0000050,9.52e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.34e-12,3;DOID:0060083,3.34e-12,3;DOID:1240,3.34e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!8.40e-09!9;UBERON:0004808!8.40e-09!9;UBERON:0001277!8.40e-09!9;UBERON:0000485!5.52e-08!11;UBERON:0002384!5.12e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.47e-18,9;UBERON:0004808,3.47e-18,9;UBERON:0001277,3.47e-18,9;UBERON:0000485,1.00e-14,11;UBERON:0002384,1.92e-14,46;UBERON:0001242,2.50e-12,13;UBERON:0001262,2.50e-12,13;UBERON:0004786,2.50e-12,13;UBERON:0000344,1.44e-10,15;UBERON:0003929,4.41e-07,55 | |||
|phase1_expression=0,2.09385244583617,1.81999695755814,3.0246421130683,2.50447864973174,0.839396359559449,0.934450562382103,6.19791952519566,2.111830832275,3.04283884218592,0.513653904676515,0.478632953972018,6.33442700745461,3.93391810885488,0,0.404950534779652,1.39912375625629,0.630924330716475,0.274228867211478,0,0,0.595745707205312,0,0,0,0,0.86152399231815,0.215471232685889,0,0,0,10.7955214488137,6.1506478758457,15.8481681015439,3.17736781726402,1.16364251750945,4.49172583777212,0.837063261473815,0,0.523523743973798,1.76469446409304,1.36609096991689,0.485510353031154,0,0.405507724878058,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,1.17447824240415,2.90144856804538,1.00828139742739,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,5.50742528533188,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,1.01343946190039,0.505524445014783,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,1.31796636956512,1.19980546198682,0.762421362438388,0,0,0,0,0.255715457330331,0,0.324482526135515,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0.257347907114715,0.568326998791185,0,0,0.36012412292203,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.584511715822624,0,0,0,0.178065603667255,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0.341741761595705,0.619160603889667,0.185194527369712,0,0.27338845544205,0.228778173206523,0,1.53946597556024,0.967399816630967,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0.314578033277133,0.483168241652012,0,0.632022241256357,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0.443068581523732,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0.443971906748129,0.269141569828427,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:53674495..53674503,- | |||
}} |
Revision as of 18:02, 13 September 2013
Short description: | p@chr19:53674495..53674503, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:53674495..53674503, - |
Coexpression cluster: | MCL_coexpression_mm9:480 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.47e-18 | 9 |
gastrointestinal system epithelium | 3.47e-18 | 9 |
intestinal epithelium | 3.47e-18 | 9 |
simple columnar epithelium | 1.00e-14 | 11 |
connective tissue | 1.92e-14 | 46 |
intestinal mucosa | 2.50e-12 | 13 |
wall of intestine | 2.50e-12 | 13 |
gastrointestinal system mucosa | 2.50e-12 | 13 |
mucosa | 1.44e-10 | 15 |
gut epithelium | 4.41e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.34e-12 | 3 |
immune system cancer | 3.34e-12 | 3 |
leukemia | 3.34e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.