FFCP PHASE1:Mm9::chr19:53603451..53603479,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=441|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:53603451..53603479,-|id=chr19:53603451..53603479,-|ontology_enrichment_celltype=CL:0000838!2.04e-07!12;CL:0000791!2.32e-07!9;CL:0000789!2.32e-07!9;CL:0002420!2.32e-07!9;CL:0002419!2.32e-07!9;CL:0000790!2.32e-07!9;CL:0002563!3.63e-07!9;CL:0002251!3.63e-07!9;CL:0000084!5.53e-07!11;CL:0000827!5.53e-07!11;CL:0000624!8.62e-07!8;CL:0000063!9.42e-07!66|ontology_enrichment_celltype_v019_2=CL:0000791,5.75e-16,9;CL:0000789,5.75e-16,9;CL:0002420,5.75e-16,9;CL:0002419,5.75e-16,9;CL:0000790,5.75e-16,9;CL:0002563,1.73e-15,9;CL:0002251,1.73e-15,9;CL:0000624,1.47e-14,8;CL:0000066,2.10e-14,25;CL:0002076,2.91e-14,15;CL:0000838,9.91e-14,12;CL:0000075,7.29e-13,7;CL:0000084,1.17e-12,11;CL:0000827,1.17e-12,11;CL:0000542,1.77e-12,13;CL:0000051,1.77e-12,13;CL:0000223,5.65e-12,20;CL:0000239,2.94e-11,6;CL:0000677,2.94e-11,6;CL:0000584,2.94e-11,6;CL:0000893,3.58e-11,6;CL:0002489,3.58e-11,6;CL:0000898,3.58e-11,6;CL:0000809,3.58e-11,6;CL:0000810,3.58e-11,6;CL:0000895,3.58e-11,6;CL:0000808,3.58e-11,6;CL:0000894,3.58e-11,6;CL:0000806,3.58e-11,6;CL:0000807,3.58e-11,6;CL:0000805,3.58e-11,6;CL:0002425,3.58e-11,6;CL:0002436,3.58e-11,6;CL:0002427,3.58e-11,6;CL:0002428,3.58e-11,6;CL:0002429,3.58e-11,6;CL:0002433,3.58e-11,6;CL:0002431,3.58e-11,6;CL:0002432,3.58e-11,6;CL:0000738,5.80e-09,17;CL:0002087,5.80e-09,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!1.95e-08!11;UBERON:0003350!3.63e-07!9;UBERON:0004808!3.63e-07!9;UBERON:0001277!3.63e-07!9;UBERON:0000344!8.97e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.24e-18,11;UBERON:0003350,1.73e-15,9;UBERON:0004808,1.73e-15,9;UBERON:0001277,1.73e-15,9;UBERON:0000344,3.89e-10,15;UBERON:0001242,4.66e-10,13;UBERON:0001262,4.66e-10,13;UBERON:0004786,4.66e-10,13;UBERON:0000490,2.39e-08,66|phase1_expression=3.68342348341026,8.72438519098403,8.18998630901165,11.4936400296595,11.0197060588196,2.51818907867835,1.86890112476421,9.8133725815598,7.88416844049334,7.95819389494778,4.62288514208863,2.55270908785077,7.19043065711064,4.72070173062586,0,0,0,0.946386496074713,1.50825876966313,0,0.595303031057488,0.198581902401771,0.783599367416806,0.639969691173627,1.14704640533585,4.59385571292016,0.86152399231815,0.861884930743556,0.380046838912748,0,0.665191531965914,0,0,0,3.17736781726402,1.82858109894342,3.67504841272264,1.25559489221072,0.7813353445238,1.0470474879476,4.70585190424811,0.683045484958446,0.971020706062307,0.629484089877886,0.912392380975631,0.367093504323363,0.782391344348039,0.218025156380447,0,0.58328969722285,0.419959264876088,2.87505128729943,1.17447824240415,5.80289713609076,2.68875039313971,0,0.573066879877513,1.54701627683233,0.202316460859598,0,0,2.37191172448392,1.77858959222228,0.449949858640699,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0,0.395658863190582,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0.908714319998209,0.453429360640713,6.37701875143691,0,0,0,0.649776417447669,0,0.280888840263504,0.852151612890289,1.81850203222008,2.12003744706204,5.35204995151386,0,0,0,1.29894624606728,1.26679932737549,1.01104889002957,0.91347103775248,0.776813650941515,0,0.693941307064543,0,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0.494389935468748,0,0.884610551949874,0,0.220841518460394,0,0,2.92780797011547,6.0739544975902,0.510914110417183,0.838705871541442,0.599902730993408,0.127070227073065,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0,0,0.305518091550949,0.373220911830279,1.0108910337347,0.210441855886474,0,0.229902104433473,0.720248519221397,0.150704817835715,1.15662048557257,1.15302348256365,1.87403449119458,0.776110112217047,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0.621377317606506,0.703578179943289,0.720248245844059,0,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.350296027101508,0.16455984991348,0.656669856316381,0.324275238183423,0.877199924551994,0.439100230582101,0.268412837520744,0.841159794256509,0.102904612379284,0.660837565967596,0.793351699990633,0,0,0.128867461322093,0,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,0.758671603812327,0.228497025219458,1.1270773567308,0,0,0.140271639780637,0.379419222745544,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.837531287209079,0.476087281772027,0.390267295715598,0.315270288212382,0,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0,0.390438744296638,0.215423397732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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=441 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:53603451..53603479,- | |||
|id=chr19:53603451..53603479,- | |||
|ontology_enrichment_celltype=CL:0000838!2.04e-07!12;CL:0000791!2.32e-07!9;CL:0000789!2.32e-07!9;CL:0002420!2.32e-07!9;CL:0002419!2.32e-07!9;CL:0000790!2.32e-07!9;CL:0002563!3.63e-07!9;CL:0002251!3.63e-07!9;CL:0000084!5.53e-07!11;CL:0000827!5.53e-07!11;CL:0000624!8.62e-07!8;CL:0000063!9.42e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.75e-16,9;CL:0000789,5.75e-16,9;CL:0002420,5.75e-16,9;CL:0002419,5.75e-16,9;CL:0000790,5.75e-16,9;CL:0002563,1.73e-15,9;CL:0002251,1.73e-15,9;CL:0000624,1.47e-14,8;CL:0000066,2.10e-14,25;CL:0002076,2.91e-14,15;CL:0000838,9.91e-14,12;CL:0000075,7.29e-13,7;CL:0000084,1.17e-12,11;CL:0000827,1.17e-12,11;CL:0000542,1.77e-12,13;CL:0000051,1.77e-12,13;CL:0000223,5.65e-12,20;CL:0000239,2.94e-11,6;CL:0000677,2.94e-11,6;CL:0000584,2.94e-11,6;CL:0000893,3.58e-11,6;CL:0002489,3.58e-11,6;CL:0000898,3.58e-11,6;CL:0000809,3.58e-11,6;CL:0000810,3.58e-11,6;CL:0000895,3.58e-11,6;CL:0000808,3.58e-11,6;CL:0000894,3.58e-11,6;CL:0000806,3.58e-11,6;CL:0000807,3.58e-11,6;CL:0000805,3.58e-11,6;CL:0002425,3.58e-11,6;CL:0002436,3.58e-11,6;CL:0002427,3.58e-11,6;CL:0002428,3.58e-11,6;CL:0002429,3.58e-11,6;CL:0002433,3.58e-11,6;CL:0002431,3.58e-11,6;CL:0002432,3.58e-11,6;CL:0000738,5.80e-09,17;CL:0002087,5.80e-09,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!1.95e-08!11;UBERON:0003350!3.63e-07!9;UBERON:0004808!3.63e-07!9;UBERON:0001277!3.63e-07!9;UBERON:0000344!8.97e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,1.24e-18,11;UBERON:0003350,1.73e-15,9;UBERON:0004808,1.73e-15,9;UBERON:0001277,1.73e-15,9;UBERON:0000344,3.89e-10,15;UBERON:0001242,4.66e-10,13;UBERON:0001262,4.66e-10,13;UBERON:0004786,4.66e-10,13;UBERON:0000490,2.39e-08,66 | |||
|phase1_expression=3.68342348341026,8.72438519098403,8.18998630901165,11.4936400296595,11.0197060588196,2.51818907867835,1.86890112476421,9.8133725815598,7.88416844049334,7.95819389494778,4.62288514208863,2.55270908785077,7.19043065711064,4.72070173062586,0,0,0,0.946386496074713,1.50825876966313,0,0.595303031057488,0.198581902401771,0.783599367416806,0.639969691173627,1.14704640533585,4.59385571292016,0.86152399231815,0.861884930743556,0.380046838912748,0,0.665191531965914,0,0,0,3.17736781726402,1.82858109894342,3.67504841272264,1.25559489221072,0.7813353445238,1.0470474879476,4.70585190424811,0.683045484958446,0.971020706062307,0.629484089877886,0.912392380975631,0.367093504323363,0.782391344348039,0.218025156380447,0,0.58328969722285,0.419959264876088,2.87505128729943,1.17447824240415,5.80289713609076,2.68875039313971,0,0.573066879877513,1.54701627683233,0.202316460859598,0,0,2.37191172448392,1.77858959222228,0.449949858640699,0,0,0.299600110518405,0.768436610643109,0.103689612308478,0,0.210324961351382,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0,0.395658863190582,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0.908714319998209,0.453429360640713,6.37701875143691,0,0,0,0.649776417447669,0,0.280888840263504,0.852151612890289,1.81850203222008,2.12003744706204,5.35204995151386,0,0,0,1.29894624606728,1.26679932737549,1.01104889002957,0.91347103775248,0.776813650941515,0,0.693941307064543,0,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0.494389935468748,0,0.884610551949874,0,0.220841518460394,0,0,2.92780797011547,6.0739544975902,0.510914110417183,0.838705871541442,0.599902730993408,0.127070227073065,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0,0,0.305518091550949,0.373220911830279,1.0108910337347,0.210441855886474,0,0.229902104433473,0.720248519221397,0.150704817835715,1.15662048557257,1.15302348256365,1.87403449119458,0.776110112217047,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0.257347907114715,0,0.621377317606506,0.703578179943289,0.720248245844059,0,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0.350296027101508,0.16455984991348,0.656669856316381,0.324275238183423,0.877199924551994,0.439100230582101,0.268412837520744,0.841159794256509,0.102904612379284,0.660837565967596,0.793351699990633,0,0,0.128867461322093,0,0,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,0.758671603812327,0.228497025219458,1.1270773567308,0,0,0.140271639780637,0.379419222745544,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.837531287209079,0.476087281772027,0.390267295715598,0.315270288212382,0,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0,0.390438744296638,0.215423397732799,0.477937595905104,0.668396022247182,0.566153061577665,0,0,1.18586333383957,1.28528526568723,0.141940085208269,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,1.29214146584111,0,0.356497378384721,0,0,1.03135543248187,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0.535106452806212,0.493647061806363,0,0.469343416127421,0.42366414172764,0.661585194164886,1.31909002353184,0.161464426695906,0.241251699712623,0.596861720015682,1.14898629821543,0.291480836629851,0,0,0.412773735926445,0,0,0,0,2.88963330989554,1.81936888020755,2.3493995546752,0,0.316335993581135,0.609958401380546,0,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0.259229946583586,0,4.50954350947352,0.149516546043979,0.165458490457098,0.388902376688095,0.129159823477731,0.844780627453891,0.352071715937262,0.13020438484395,0.314578033277133,0.483168241652012,1.15212002503146,0.316011120628178,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.360586348559907,0.295379054349154,0.302899349844443,0.685861259894999,0.302478555410522,0.779663045918019,1.44317762460494,1.5193997283604,0.226730383615211,0,0.358855426437903,0.167884616364078,0,0.187682475451182,0,0.643105137237198,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0.222246727801615,0.412070114477788,0,0.505394423527595,0,0,0,0.256100609619477,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr19:53603451..53603479,- | |||
}} |
Revision as of 18:02, 13 September 2013
Short description: | p@chr19:53603451..53603479, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:53603451..53603479, - |
Coexpression cluster: | MCL_coexpression_mm9:441 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 1.24e-18 | 11 |
epithelium of mucosa | 1.73e-15 | 9 |
gastrointestinal system epithelium | 1.73e-15 | 9 |
intestinal epithelium | 1.73e-15 | 9 |
mucosa | 3.89e-10 | 15 |
intestinal mucosa | 4.66e-10 | 13 |
wall of intestine | 4.66e-10 | 13 |
gastrointestinal system mucosa | 4.66e-10 | 13 |
unilaminar epithelium | 2.39e-08 | 66 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.