FFCP PHASE1:Hg19::chr6:130686664..130686693,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=114801|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21075|TSSclassifier=S|UniProt=Q86VY9|association_with_transcript=-185bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end|coexpression_cluster_id=C714|description=CAGE_peak_7_at_TMEM200A_5end|id=chr6:130686664..130686693,+|ontology_enrichment_celltype=CL:0000055!4.07e-27!180;CL:0000192!1.39e-15!42;CL:0000514!1.39e-15!42;CL:0000680!4.46e-15!57;CL:0000056!4.46e-15!57;CL:0000355!4.46e-15!57;CL:0000393!5.11e-15!60;CL:0000211!5.11e-15!60;CL:0000187!6.47e-15!54;CL:0000359!1.79e-14!32;CL:0000057!2.28e-14!75;CL:0000183!4.71e-14!59;CL:0002334!1.25e-08!12;CL:0002539!7.61e-08!10|ontology_enrichment_celltype_v019=CL:0000359;1.93e-18;32!CL:0000192;3.40e-15;43!CL:0002334;8.90e-12;12!CL:0002539;6.52e-11;10!CL:0000187;2.23e-08;55!CL:0000393;2.50e-07;61!CL:0000211;2.50e-07;61|ontology_enrichment_celltype_v019_2=CL:0000192,8.07e-21,43;CL:0000514,8.07e-21,43;CL:0000359,2.08e-20,32;CL:0000187,8.74e-17,55;CL:0000680,3.24e-16,58;CL:0000056,3.24e-16,58;CL:0000355,3.24e-16,58;CL:0000393,1.07e-15,61;CL:0000211,1.07e-15,61;CL:0002334,2.07e-12,12;CL:0000057,3.23e-12,76;CL:0000723,3.51e-12,433;CL:0000048,5.92e-12,427;CL:0000034,1.18e-11,441;CL:0002539,3.31e-11,10|ontology_enrichment_development_v019=CL:0000514;3.40e-15;43!CL:0000355;9.42e-08;58|ontology_enrichment_disease=DOID:2394!4.35e-07!14|ontology_enrichment_disease_v019=DOID:2394;2.99e-10;14|ontology_enrichment_disease_v019_2=DOID:2394,1.65e-10,14|ontology_enrichment_uberon=UBERON:0000914!8.27e-17!83;UBERON:0002329!8.27e-17!83;UBERON:0003077!8.27e-17!83;UBERON:0003059!8.27e-17!83;UBERON:0007282!8.27e-17!83;UBERON:0009618!8.27e-17!83;UBERON:0007285!8.27e-17!83;UBERON:0004290!4.35e-15!70;UBERON:0002385!1.12e-14!63;UBERON:0001015!1.12e-14!63;UBERON:0000383!1.12e-14!63;UBERON:0001134!2.19e-14!61;UBERON:0002036!2.19e-14!61;UBERON:0003082!2.19e-14!61;UBERON:0000486!6.95e-14!82;UBERON:0001637!2.67e-10!42;UBERON:0003509!2.67e-10!42;UBERON:0004572!2.67e-10!42;UBERON:0000475!8.61e-10!365;UBERON:0004573!3.68e-09!33;UBERON:0004571!3.68e-09!33;UBERON:0001135!7.99e-09!15;UBERON:0005256!2.68e-08!143;UBERON:0003102!5.17e-08!95;UBERON:0004237!7.61e-08!10;UBERON:0004695!7.61e-08!10;UBERON:0002111!7.61e-08!10;UBERON:0004178!7.61e-08!10;UBERON:0002049!3.19e-07!79;UBERON:0007798!3.19e-07!79;UBERON:0000947!7.33e-07!21;UBERON:0010191!7.33e-07!21;UBERON:0002100!7.47e-07!216|ontology_enrichment_uberon_v019=UBERON:0001135;1.93e-11;15!UBERON:0004237;6.52e-11;10!UBERON:0004695;6.52e-11;10!UBERON:0002111;6.52e-11;10!UBERON:0004178;6.52e-11;10!UBERON:0004573;4.37e-10;33!UBERON:0004571;4.37e-10;33!UBERON:0000947;2.47e-08;21!UBERON:0010191;2.47e-08;21!UBERON:0001637;3.91e-08;42!UBERON:0003509;3.91e-08;42!UBERON:0004572;3.91e-08;42!UBERON:0002385;4.13e-07;31!UBERON:0001015;4.13e-07;31!UBERON:0000383;4.13e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.53e-15,62;UBERON:0002036,1.53e-15,62;UBERON:0003082,1.53e-15,62;UBERON:0002385,1.94e-15,64;UBERON:0001015,1.94e-15,64;UBERON:0000383,1.94e-15,64;UBERON:0007524,1.46e-14,73;UBERON:0002329,3.05e-14,71;UBERON:0003059,3.05e-14,71;UBERON:0007282,3.05e-14,71;UBERON:0004290,3.05e-14,71;UBERON:0009618,3.05e-14,71;UBERON:0003077,7.42e-14,72;UBERON:0007285,7.42e-14,72;UBERON:0000486,2.12e-13,83;UBERON:0001637,2.12e-12,42;UBERON:0003509,2.12e-12,42;UBERON:0004572,2.12e-12,42;UBERON:0007503,8.93e-12,78;UBERON:0001135,1.02e-11,15;UBERON:0004573,2.43e-11,33;UBERON:0004571,2.43e-11,33;UBERON:0004237,3.31e-11,10;UBERON:0004695,3.31e-11,10;UBERON:0002111,3.31e-11,10;UBERON:0004178,3.31e-11,10;UBERON:0000947,1.76e-08,21;UBERON:0010191,1.76e-08,21;UBERON:0002049,4.35e-08,78;UBERON:0007798,4.35e-08,78;UBERON:0007500,4.99e-08,59;UBERON:0001981,4.99e-08,59;UBERON:0004537,4.99e-08,59;UBERON:0006965,4.99e-08,59;UBERON:0005256,4.78e-07,122;UBERON:0000055,6.08e-07,68|phase1_expression=2.90685406832891,1.92690471501885,1.55049844505568,2.00146596706261,2.23480547213644,5.23403114460221,0,0.631719873426831,0.522371256399677,0.491467873003018,0,0,0,0.495065411840187,0.331397375727916,8.0679017574213,2.41077811209591,2.19093027116212,2.92759679274304,0.369363174230364,1.22400414746552,0.626909442956176,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0.616804496998528,0,0,0,0,1.44833593950726,0,0.221533894583621,0,0,0.390178042679635,1.97325485524411,1.93445012450094,0.579606171470105,0,0,0,0.793165398882963,0.383220493601921,0,0,0,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.473554504088034,0.821127996921047,0,0,0.434473211648397,0,0.670700859703636,0.767175371061182,1.44575660953827,1.00267582127178,1.01392563272577,0.795285947051099,1.45990461090791,0.567208902984407,0.665188192387692,1.14185221401064,1.37528029272598,0.728590576585084,0,0,0,0,0.238490624305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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=114801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21075 | |||
|TSSclassifier=S | |||
|UniProt=Q86VY9 | |||
|association_with_transcript=-185bp_to_ENST00000296978,uc003qca.2,uc010kfh.2_5end | |||
|coexpression_cluster_id=C714 | |||
|description=CAGE_peak_7_at_TMEM200A_5end | |||
|id=chr6:130686664..130686693,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.07e-27!180;CL:0000192!1.39e-15!42;CL:0000514!1.39e-15!42;CL:0000680!4.46e-15!57;CL:0000056!4.46e-15!57;CL:0000355!4.46e-15!57;CL:0000393!5.11e-15!60;CL:0000211!5.11e-15!60;CL:0000187!6.47e-15!54;CL:0000359!1.79e-14!32;CL:0000057!2.28e-14!75;CL:0000183!4.71e-14!59;CL:0002334!1.25e-08!12;CL:0002539!7.61e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.93e-18;32!CL:0000192;3.40e-15;43!CL:0002334;8.90e-12;12!CL:0002539;6.52e-11;10!CL:0000187;2.23e-08;55!CL:0000393;2.50e-07;61!CL:0000211;2.50e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.07e-21,43;CL:0000514,8.07e-21,43;CL:0000359,2.08e-20,32;CL:0000187,8.74e-17,55;CL:0000680,3.24e-16,58;CL:0000056,3.24e-16,58;CL:0000355,3.24e-16,58;CL:0000393,1.07e-15,61;CL:0000211,1.07e-15,61;CL:0002334,2.07e-12,12;CL:0000057,3.23e-12,76;CL:0000723,3.51e-12,433;CL:0000048,5.92e-12,427;CL:0000034,1.18e-11,441;CL:0002539,3.31e-11,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.40e-15;43!CL:0000355;9.42e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!4.35e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.99e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.65e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.27e-17!83;UBERON:0002329!8.27e-17!83;UBERON:0003077!8.27e-17!83;UBERON:0003059!8.27e-17!83;UBERON:0007282!8.27e-17!83;UBERON:0009618!8.27e-17!83;UBERON:0007285!8.27e-17!83;UBERON:0004290!4.35e-15!70;UBERON:0002385!1.12e-14!63;UBERON:0001015!1.12e-14!63;UBERON:0000383!1.12e-14!63;UBERON:0001134!2.19e-14!61;UBERON:0002036!2.19e-14!61;UBERON:0003082!2.19e-14!61;UBERON:0000486!6.95e-14!82;UBERON:0001637!2.67e-10!42;UBERON:0003509!2.67e-10!42;UBERON:0004572!2.67e-10!42;UBERON:0000475!8.61e-10!365;UBERON:0004573!3.68e-09!33;UBERON:0004571!3.68e-09!33;UBERON:0001135!7.99e-09!15;UBERON:0005256!2.68e-08!143;UBERON:0003102!5.17e-08!95;UBERON:0004237!7.61e-08!10;UBERON:0004695!7.61e-08!10;UBERON:0002111!7.61e-08!10;UBERON:0004178!7.61e-08!10;UBERON:0002049!3.19e-07!79;UBERON:0007798!3.19e-07!79;UBERON:0000947!7.33e-07!21;UBERON:0010191!7.33e-07!21;UBERON:0002100!7.47e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;1.93e-11;15!UBERON:0004237;6.52e-11;10!UBERON:0004695;6.52e-11;10!UBERON:0002111;6.52e-11;10!UBERON:0004178;6.52e-11;10!UBERON:0004573;4.37e-10;33!UBERON:0004571;4.37e-10;33!UBERON:0000947;2.47e-08;21!UBERON:0010191;2.47e-08;21!UBERON:0001637;3.91e-08;42!UBERON:0003509;3.91e-08;42!UBERON:0004572;3.91e-08;42!UBERON:0002385;4.13e-07;31!UBERON:0001015;4.13e-07;31!UBERON:0000383;4.13e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.53e-15,62;UBERON:0002036,1.53e-15,62;UBERON:0003082,1.53e-15,62;UBERON:0002385,1.94e-15,64;UBERON:0001015,1.94e-15,64;UBERON:0000383,1.94e-15,64;UBERON:0007524,1.46e-14,73;UBERON:0002329,3.05e-14,71;UBERON:0003059,3.05e-14,71;UBERON:0007282,3.05e-14,71;UBERON:0004290,3.05e-14,71;UBERON:0009618,3.05e-14,71;UBERON:0003077,7.42e-14,72;UBERON:0007285,7.42e-14,72;UBERON:0000486,2.12e-13,83;UBERON:0001637,2.12e-12,42;UBERON:0003509,2.12e-12,42;UBERON:0004572,2.12e-12,42;UBERON:0007503,8.93e-12,78;UBERON:0001135,1.02e-11,15;UBERON:0004573,2.43e-11,33;UBERON:0004571,2.43e-11,33;UBERON:0004237,3.31e-11,10;UBERON:0004695,3.31e-11,10;UBERON:0002111,3.31e-11,10;UBERON:0004178,3.31e-11,10;UBERON:0000947,1.76e-08,21;UBERON:0010191,1.76e-08,21;UBERON:0002049,4.35e-08,78;UBERON:0007798,4.35e-08,78;UBERON:0007500,4.99e-08,59;UBERON:0001981,4.99e-08,59;UBERON:0004537,4.99e-08,59;UBERON:0006965,4.99e-08,59;UBERON:0005256,4.78e-07,122;UBERON:0000055,6.08e-07,68 | |||
|phase1_expression=2.90685406832891,1.92690471501885,1.55049844505568,2.00146596706261,2.23480547213644,5.23403114460221,0,0.631719873426831,0.522371256399677,0.491467873003018,0,0,0,0.495065411840187,0.331397375727916,8.0679017574213,2.41077811209591,2.19093027116212,2.92759679274304,0.369363174230364,1.22400414746552,0.626909442956176,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0.616804496998528,0,0,0,0,1.44833593950726,0,0.221533894583621,0,0,0.390178042679635,1.97325485524411,1.93445012450094,0.579606171470105,0,0,0,0.793165398882963,0.383220493601921,0,0,0,0,0,0.301150238155546,0.127986611154418,1.24930726552346,0.473554504088034,0.821127996921047,0,0,0.434473211648397,0,0.670700859703636,0.767175371061182,1.44575660953827,1.00267582127178,1.01392563272577,0.795285947051099,1.45990461090791,0.567208902984407,0.665188192387692,1.14185221401064,1.37528029272598,0.728590576585084,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,1.42306505074684,0,0,0.760272105718513,0,0,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0,0.496971951695318,4.05217637326655,2.1185468930115,4.87622255272983,3.90135220418193,0,0,0.49333509683432,0.622422070799533,0,0.490385709340376,0.756787138224657,0.576175924479999,0.234321431833797,0.312160076830321,0,0.747243402759005,1.05691048779388,0.323745888736263,0.842704840213491,0.408308342509787,0.737005903870608,0.309977343527296,1.18800285728205,1.48360157567134,0,1.43723628363248,0.673344455816265,0.250237039743928,0,2.63386572528503,1.5324389789951,1.35214253015937,0.113432183160021,1.79389635688862,2.56268866582281,2.11931901159562,0.600182192168805,1.8549455262919,2.06112432036503,2.04728541964749,6.41350062516812,2.04617710838517,0.757301322732344,2.39329736469978,5.81925804547723,2.4850671476163,1.30977727695932,1.18692414617341,2.12586938479627,1.90922284413584,1.14721838155602,0.487894824518382,0.662648841607426,0.580969714347592,0.932949495138334,0.504641701751257,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.491953754172454,1.20097467208968,0.768251997860379,2.24803506515239,1.70899253099772,0.370353780634118,0.977424915930974,0,0,1.15930404975077,1.99594780200897,0,0,0,0,0,0,0,0,0.93733833986777,1.00789276919316,0.708875486211932,0.895585227028483,0.290633938513962,1.15014803749563,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,1.68196626518041,1.30788020649984,1.7601188597028,3.49033632546,0,0,5.31876233169741,2.08014873822732,0.257207374262142,0,1.3321108950805,0,0,0.823240336780769,0,0.355391948742546,0,2.71295439353627,2.61460037580088,3.69900067373611,0,0,0,1.19812427745791,0,2.85273810081437,0.434343920002738,1.43833425785268,0.179060963239896,0,0,0.215627574859517,0.128343036279748,1.01637849688985,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,1.35632511849868,0.623912584592421,0.356857977594324,0.315404830067869,1.63997980989798,2.70851489754947,0,2.0694614258501,5.31380478828349,3.13427586520895,2.08520674723399,0.391602314925481,1.71571711905428,0,0,0.213455115606889,0,0,0.30239029332968,1.73675465473144,3.99001130548962,2.52594084989766,2.69092213436972,3.07024349440022,4.3430558708774,2.96836132889982,2.46735510084249,3.37367278094941,1.88892458831761,4.67328986265259,2.5566283261191,0.846016147141356,1.60405176242628,0.184161977871793,1.14814448164607,1.45672934405374,1.04899531967539,0.451199612907412,0.847168708148562,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0,0.721287081534056,0,0,2.29706215198469,0.650060246036521,3.21367859688319,1.16004861950546,0,0.460511024178389,0.275673144969061,0.322260734604821,0.290033387828457,0.0852266274161009,1.69160867728801,0,0,0.127612712494584,0,3.71876439437829,4.40737285562896,3.485186350803,1.84820148105653,3.72614221221915,4.34966496037536,2.96518750566272,1.14499909393593,1.86079184679834,2.84741482246853,1.5250415513906,0.255897791311334,1.71175595213568,3.81843897511124,0,1.61885211824983,1.92175920815238,1.29593642580255,0.606547444719948,0,0.421258456238981,0,2.68084838594413,1.05650146756755,1.36499911407986,2.40389234321312,3.39024349860728,2.75682671773062,3.3171948762061,1.75380354101505,0.578775534266688,0.655894752046633,2.02910376962704,2.478587984798,2.25356482025793,5.87986544036611,2.55447506634115,1.426684205925,1.06428319221179,2.74439925886963,0.329294892959902,1.13841952129715,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0.399158742865633,1.1490322207942,0,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0.586032717087576,0,0.66866030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| |||
|short_description=p7@TMEM200A | |||
}} |
Revision as of 17:56, 13 September 2013
Short description: | p7@TMEM200A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TMEM200A_5end |
Coexpression cluster: | C714_Smooth_Fibroblast_Mesenchymal_mesenchymal_Myoblast_leiomyoma_Preadipocyte |
Association with transcript: | -185bp_to_ENST00000296978, uc003qca.2, uc010kfh.2_5end |
EntrezGene: | TMEM200A |
HGNC: | 21075 |
UniProt: | Q86VY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.07e-21 | 43 |
smooth muscle myoblast | 8.07e-21 | 43 |
vascular associated smooth muscle cell | 2.08e-20 | 32 |
muscle cell | 8.74e-17 | 55 |
muscle precursor cell | 3.24e-16 | 58 |
myoblast | 3.24e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.24e-16 | 58 |
electrically responsive cell | 1.07e-15 | 61 |
electrically active cell | 1.07e-15 | 61 |
preadipocyte | 2.07e-12 | 12 |
fibroblast | 3.23e-12 | 76 |
somatic stem cell | 3.51e-12 | 433 |
multi fate stem cell | 5.92e-12 | 427 |
stem cell | 1.18e-11 | 441 |
aortic smooth muscle cell | 3.31e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.65e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.