FFCP PHASE1:Mm9::chr19:46400679..46400701,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=538|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:46400679..46400701,-|id=chr19:46400679..46400701,-|ontology_enrichment_celltype=CL:0000117!6.37e-15!23;CL:0000337!6.37e-15!23;CL:0000540!1.69e-10!33;CL:0000047!1.69e-10!33;CL:0000031!1.69e-10!33;CL:0000404!1.69e-10!33;CL:0000393!1.35e-07!39;CL:0000211!1.35e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.09e-21,23;CL:0000337,5.09e-21,23;CL:0000540,7.75e-13,33;CL:0000047,7.75e-13,33;CL:0000031,7.75e-13,33;CL:0000404,7.75e-13,33;CL:0000393,5.43e-10,39;CL:0000211,5.43e-10,39;CL:0002319,1.48e-08,43;CL:0000221,3.06e-08,44;CL:0000133,3.06e-08,44;CL:0002609,3.03e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.17e-29!52;UBERON:0005068!1.17e-29!52;UBERON:0006241!1.17e-29!52;UBERON:0007135!1.17e-29!52;UBERON:0002346!3.20e-29!71;UBERON:0003075!3.20e-29!71;UBERON:0007284!3.20e-29!71;UBERON:0000955!9.52e-27!50;UBERON:0006238!9.52e-27!50;UBERON:0001017!3.35e-26!73;UBERON:0005743!3.35e-26!73;UBERON:0000073!9.50e-26!75;UBERON:0001016!9.50e-26!75;UBERON:0003056!9.53e-26!49;UBERON:0002616!1.04e-25!49;UBERON:0000033!1.17e-25!63;UBERON:0002020!2.54e-24!34;UBERON:0003080!4.89e-24!40;UBERON:0002780!3.30e-23!39;UBERON:0001890!3.30e-23!39;UBERON:0006240!3.30e-23!39;UBERON:0004121!7.38e-23!102;UBERON:0000924!7.38e-23!102;UBERON:0006601!7.38e-23!102;UBERON:0002791!7.52e-21!29;UBERON:0003528!7.52e-21!29;UBERON:0001893!7.52e-21!29;UBERON:0000956!2.70e-14!21;UBERON:0001869!2.70e-14!21;UBERON:0000203!2.70e-14!21;UBERON:0007811!1.04e-13!86;UBERON:0002619!1.17e-11!17;UBERON:0000153!4.59e-11!94;UBERON:0002021!2.23e-10!10;UBERON:0000411!2.23e-10!10;UBERON:0001950!2.23e-10!10;UBERON:0002420!8.98e-08!8;UBERON:0007245!8.98e-08!8;UBERON:0010009!8.98e-08!8;UBERON:0010011!8.98e-08!8;UBERON:0000454!8.98e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.73e-37,54;UBERON:0001049,3.13e-37,52;UBERON:0005068,3.13e-37,52;UBERON:0006241,3.13e-37,52;UBERON:0007135,3.13e-37,52;UBERON:0002020,5.11e-36,34;UBERON:0000955,5.71e-34,47;UBERON:0006238,5.71e-34,47;UBERON:0001017,1.09e-32,73;UBERON:0003528,1.52e-32,29;UBERON:0002791,1.52e-32,29;UBERON:0001893,1.52e-32,29;UBERON:0002616,2.02e-32,46;UBERON:0002346,6.74e-32,64;UBERON:0003075,6.74e-32,64;UBERON:0007284,6.74e-32,64;UBERON:0001016,1.85e-31,75;UBERON:0003080,1.74e-29,40;UBERON:0002780,2.99e-28,39;UBERON:0001890,2.99e-28,39;UBERON:0006240,2.99e-28,39;UBERON:0010371,2.02e-26,73;UBERON:0003056,3.43e-26,49;UBERON:0004121,5.04e-25,95;UBERON:0000924,5.04e-25,95;UBERON:0006601,5.04e-25,95;UBERON:0000956,3.25e-22,21;UBERON:0001869,3.25e-22,21;UBERON:0000203,3.25e-22,21;UBERON:0010314,2.02e-18,92;UBERON:0002619,4.49e-18,17;UBERON:0002021,2.39e-15,10;UBERON:0000411,2.39e-15,10;UBERON:0001950,2.39e-15,10;UBERON:0002420,2.79e-11,8;UBERON:0007245,2.79e-11,8;UBERON:0010009,2.79e-11,8;UBERON:0010011,2.79e-11,8;UBERON:0000454,2.79e-11,8;UBERON:0000025,1.17e-10,114;UBERON:0004111,3.00e-09,122;UBERON:0000369,2.32e-08,5;UBERON:0002435,2.32e-08,5;UBERON:0000204,2.32e-08,5;UBERON:0010082,2.32e-08,5;UBERON:0003076,6.26e-08,12;UBERON:0003057,6.26e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,4.23192783417626,6.97214543856797,0,0,0,0,0,0,0,1.55534418462716,2.02508907497536,1.68259969081106,0.856952953211411,2.87129103237098,2.81728838194394,1.53352753629178,3.67687514644008,0,1.14918604276669,1.68967186581868,5.40733779693795,5.85520919055422,7.8137005583514,2.51264699101243,2.25105044012672,2.75036845998258,4.41942878210502,3.55929201997757,3.16879057903011,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,9.07620470735796,7.12118803165747,0,0,0,0,4.94309110035915,26.5350349634803,12.6910895633993,7.12679712788333,7.67146371990992,5.61027720310812,7.46309810111685,0,0,0,5.89237196482127,0,0,0.180062129805349,0.30140963567143,0.680364991513279,0.896796041993948,0.937017245597288,16.557015727297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,7.51203670368776,0,0,0,0.464473343720877,0.128867461322093,0,0.667134131534611,0,0,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.87538698547525,0,0,0,0.780877488593277,0,0,0,0,0,0.292255857911312,0.790575555893047,35.024023489977,0,0,0,0,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,4.42571487479924,0.36012218806262,0.776152102696527,0,0,0.891844088010353,0.987294123612726,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.1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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=538 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:46400679..46400701,- | |||
|id=chr19:46400679..46400701,- | |||
|ontology_enrichment_celltype=CL:0000117!6.37e-15!23;CL:0000337!6.37e-15!23;CL:0000540!1.69e-10!33;CL:0000047!1.69e-10!33;CL:0000031!1.69e-10!33;CL:0000404!1.69e-10!33;CL:0000393!1.35e-07!39;CL:0000211!1.35e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.09e-21,23;CL:0000337,5.09e-21,23;CL:0000540,7.75e-13,33;CL:0000047,7.75e-13,33;CL:0000031,7.75e-13,33;CL:0000404,7.75e-13,33;CL:0000393,5.43e-10,39;CL:0000211,5.43e-10,39;CL:0002319,1.48e-08,43;CL:0000221,3.06e-08,44;CL:0000133,3.06e-08,44;CL:0002609,3.03e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-29!52;UBERON:0005068!1.17e-29!52;UBERON:0006241!1.17e-29!52;UBERON:0007135!1.17e-29!52;UBERON:0002346!3.20e-29!71;UBERON:0003075!3.20e-29!71;UBERON:0007284!3.20e-29!71;UBERON:0000955!9.52e-27!50;UBERON:0006238!9.52e-27!50;UBERON:0001017!3.35e-26!73;UBERON:0005743!3.35e-26!73;UBERON:0000073!9.50e-26!75;UBERON:0001016!9.50e-26!75;UBERON:0003056!9.53e-26!49;UBERON:0002616!1.04e-25!49;UBERON:0000033!1.17e-25!63;UBERON:0002020!2.54e-24!34;UBERON:0003080!4.89e-24!40;UBERON:0002780!3.30e-23!39;UBERON:0001890!3.30e-23!39;UBERON:0006240!3.30e-23!39;UBERON:0004121!7.38e-23!102;UBERON:0000924!7.38e-23!102;UBERON:0006601!7.38e-23!102;UBERON:0002791!7.52e-21!29;UBERON:0003528!7.52e-21!29;UBERON:0001893!7.52e-21!29;UBERON:0000956!2.70e-14!21;UBERON:0001869!2.70e-14!21;UBERON:0000203!2.70e-14!21;UBERON:0007811!1.04e-13!86;UBERON:0002619!1.17e-11!17;UBERON:0000153!4.59e-11!94;UBERON:0002021!2.23e-10!10;UBERON:0000411!2.23e-10!10;UBERON:0001950!2.23e-10!10;UBERON:0002420!8.98e-08!8;UBERON:0007245!8.98e-08!8;UBERON:0010009!8.98e-08!8;UBERON:0010011!8.98e-08!8;UBERON:0000454!8.98e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.73e-37,54;UBERON:0001049,3.13e-37,52;UBERON:0005068,3.13e-37,52;UBERON:0006241,3.13e-37,52;UBERON:0007135,3.13e-37,52;UBERON:0002020,5.11e-36,34;UBERON:0000955,5.71e-34,47;UBERON:0006238,5.71e-34,47;UBERON:0001017,1.09e-32,73;UBERON:0003528,1.52e-32,29;UBERON:0002791,1.52e-32,29;UBERON:0001893,1.52e-32,29;UBERON:0002616,2.02e-32,46;UBERON:0002346,6.74e-32,64;UBERON:0003075,6.74e-32,64;UBERON:0007284,6.74e-32,64;UBERON:0001016,1.85e-31,75;UBERON:0003080,1.74e-29,40;UBERON:0002780,2.99e-28,39;UBERON:0001890,2.99e-28,39;UBERON:0006240,2.99e-28,39;UBERON:0010371,2.02e-26,73;UBERON:0003056,3.43e-26,49;UBERON:0004121,5.04e-25,95;UBERON:0000924,5.04e-25,95;UBERON:0006601,5.04e-25,95;UBERON:0000956,3.25e-22,21;UBERON:0001869,3.25e-22,21;UBERON:0000203,3.25e-22,21;UBERON:0010314,2.02e-18,92;UBERON:0002619,4.49e-18,17;UBERON:0002021,2.39e-15,10;UBERON:0000411,2.39e-15,10;UBERON:0001950,2.39e-15,10;UBERON:0002420,2.79e-11,8;UBERON:0007245,2.79e-11,8;UBERON:0010009,2.79e-11,8;UBERON:0010011,2.79e-11,8;UBERON:0000454,2.79e-11,8;UBERON:0000025,1.17e-10,114;UBERON:0004111,3.00e-09,122;UBERON:0000369,2.32e-08,5;UBERON:0002435,2.32e-08,5;UBERON:0000204,2.32e-08,5;UBERON:0010082,2.32e-08,5;UBERON:0003076,6.26e-08,12;UBERON:0003057,6.26e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,4.23192783417626,6.97214543856797,0,0,0,0,0,0,0,1.55534418462716,2.02508907497536,1.68259969081106,0.856952953211411,2.87129103237098,2.81728838194394,1.53352753629178,3.67687514644008,0,1.14918604276669,1.68967186581868,5.40733779693795,5.85520919055422,7.8137005583514,2.51264699101243,2.25105044012672,2.75036845998258,4.41942878210502,3.55929201997757,3.16879057903011,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,9.07620470735796,7.12118803165747,0,0,0,0,4.94309110035915,26.5350349634803,12.6910895633993,7.12679712788333,7.67146371990992,5.61027720310812,7.46309810111685,0,0,0,5.89237196482127,0,0,0.180062129805349,0.30140963567143,0.680364991513279,0.896796041993948,0.937017245597288,16.557015727297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,7.51203670368776,0,0,0,0.464473343720877,0.128867461322093,0,0.667134131534611,0,0,0.164698954724011,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,1.87538698547525,0,0,0,0.780877488593277,0,0,0,0,0,0.292255857911312,0.790575555893047,35.024023489977,0,0,0,0,1.32745138339963,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,4.42571487479924,0.36012218806262,0.776152102696527,0,0,0.891844088010353,0.987294123612726,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6368108063632,13.3494318587081,12.6037012956667,12.5452823110892,9.59115527678899,8.3093328712867,2.70009000092722,7.65546045481175,7.70342095273148,7.7664046762773,0.103787347584177,0.399024873401031,0.170733605754134,0.729320151204882,1.25767897576789,0.735374033800057,0.44449345560323,1.44224540067226,0.962757628775446,1.01078884705519,1.52087579934144,1.69763707247469,0.936415074698824,0.576226371643824,1.09127391015665,0.952587382566147,1.50649623728312,1.15745532278223,0,0.883193520806384,0.685738504770831,0.354951612318675,0.715308569841963,0.872078499793971,1.2234219453993,0.592302255241736,1.28049581010941,1.31534855718921,1.22223702461276,2.80571135828869,0.949080144993393,0.394017929502254,2.86461730218783,0.77468420592983,1.54325288784913,4.49659040288303,0.467863216890817,1.07435527024149,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr19:46400679..46400701,- | |||
}} |
Revision as of 17:51, 13 September 2013
Short description: | p@chr19:46400679..46400701, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46400679..46400701, - |
Coexpression cluster: | MCL_coexpression_mm9:538 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.09e-21 | 23 |
neuroblast (sensu Vertebrata) | 5.09e-21 | 23 |
neuron | 7.75e-13 | 33 |
neuronal stem cell | 7.75e-13 | 33 |
neuroblast | 7.75e-13 | 33 |
electrically signaling cell | 7.75e-13 | 33 |
electrically responsive cell | 5.43e-10 | 39 |
electrically active cell | 5.43e-10 | 39 |
neural cell | 1.48e-08 | 43 |
ectodermal cell | 3.06e-08 | 44 |
neurectodermal cell | 3.06e-08 | 44 |
neuron of cerebral cortex | 3.03e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.