FFCP PHASE1:Mm9::chr19:34658018..34658023,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15959|HGNC=|MCL_coexpression_id=86|UniProt=Q64345,Q5FW82|association_with_transcript=0bp_to_ENSMUST00000102825,NM_010501,uc008hgo.1_5end|description=CAGE_peak_1_at_Ifit3_5end|id=chr19:34658018..34658023,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.53e-11!51|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.49e-11,51;UBERON:0005256,4.99e-07,45;UBERON:0004119,5.92e-07,118;UBERON:0000925,5.92e-07,118;UBERON:0006595,5.92e-07,118|phase1_expression=0.480446541314382,2.09385244583617,0.454999239389536,4.83942738090928,5.50985302940982,0.16787927191189,0.233612640595526,2.84071311571468,0.703943610758334,0.468129052643987,0.34243593645101,0,21.9136934311943,2.79745287740792,4.33042690360362,4.25198061518635,0.699561878128147,12.6184866143295,6.85572168028694,5.94145512517242,12.161190491603,0.198581902401771,0,2.87986361028132,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,3.23039813075836,2.26827116783938,0.443461021310609,0,0,0,0,0.166234645358492,0.204169356262369,3.76678467663217,1.5626706890476,1.57057123192139,9.41170380849623,8.87959130445979,14.0798002379035,73.6496385157127,67.4156592609772,5.68994931701213,17.2126095756569,0.218025156380447,2.19686182734472,5.44403717407994,6.01941612989059,0,3.52343472721246,2.90144856804538,5.71359458542189,14.406528418013,3.15186783932632,25.7836046138721,0,0,0,0.338844532069132,9.78224275722253,4.04954872776629,6.92206453796882,7.104801149461,2.39680088414724,2.30530983192933,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,1.53224805702225,2.15049146558741,0,0,0,0.558365998002762,3.37657566019008,5.34793867218835,0.294628585473668,0,0,20.3703460066265,36.0476341709367,37.3925190425164,39.5794983411438,4.0798280022465,1.07940638327563,6.49776417447669,8.51251085484938,5.61777680527007,1.70430322578058,2.07828803682295,0.70667914902068,0,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0,11.3042040921869,18.9024655062435,8.16431764856536,0,0.913396434936424,0.461230994512117,7.08396410597326,5.52666923537813,9.92766071504436,14.8316980640624,28.0522752424629,5.30766331169925,0.970601099684455,1.32504911076236,2.90925151881133,5.59175283654366,5.27005434620785,1.46612694769419,5.8755122697976,0,0,0,5.09288173976397,7.32000964509802,0.376963056338593,3.47648640384553,1.53429274398198,8.51930982694196,1.29793010454206,2.95334155165917,3.23458123586242,8.33985102831127,7.15502310014011,0.520481771850815,0.919608417733892,0.720248519221397,1.35634336052144,1.56483948048054,1.7935920839879,2.34254311399322,5.95017752699736,0,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,1.4404749548556,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.983821158737019,0.154267112887378,0.930135779001631,0.536546802799238,1.5179494507732,0.822799249567402,0.820837320395476,2.02672023864639,3.65499968563331,25.0287131431798,8.45500438190342,3.78521907415429,0.617427674275707,4.29544417878937,34.3785736662608,0,0.464473343720877,0.38660238396628,0.605050573870028,3.11329261382818,21.3052701246066,6.64340686162316,16.6345944271251,29.1548842208313,38.7965120480244,23.0057622800562,29.6610404855893,13.8328351919804,7.76650965692032,0,0.114248512609729,0,0,3.49114476901726,3.71719845418688,1.64414996523069,8.11855813887812,16.4848664233444,8.88459580236964,13.3403682189217,0.333690211432188,0.196558995113203,0.449724224769707,1.01430060694251,0.482354319504834,2.29163266603278,11.5078454980324,8.43103179230184,4.94210543738547,17.2521847832825,14.5134969590716,5.30464044294753,9.34541848404313,18.1191387657131,10.6137574699941,74.6402888273083,0,0,0.169745085775188,0,0.167506257441816,4.28478553594825,3.90267295715598,2.20689201748667,4.20782910332672,2.39182152986231,25.2349504662237,20.7221978239075,21.4080606700637,164.362499493807,263.250350968255,7.37646409528554,7.72622889653251,5.29816946959713,2.57865710502847,0.163934945376675,4.54447668967871,1.57754109708128,1.17131623288992,0.430846795465598,1.19484398976276,0.891194696329576,0.566153061577665,1.21443210502468,1.46127928955656,1.18586333383957,6.74774764485795,4.40014264145633,0.712262414669021,2.28041743095006,12.0428189769951,2.65490276679926,0,0,0.188605079755898,0,3.3817866273832,31.0113951801865,2.54473610634254,1.42598951353889,1.58018378967908,1.05418608574999,2.06271086496374,12.2558258071364,0.540183282093931,0,0.214337035031592,1.24138163549592,0.713475270408282,0.329098041204242,4.26250928760439,14.54964589995,11.0152676849186,3.08739757276947,3.13283880588812,4.35953952078945,1.08563264870681,1.90995750405018,0.328281799490123,36.7265854153612,3.8939313422207,8.03093139749908,1.03193433981611,22.5937323391048,3.20226376907975,5.19438065339896,8.46479240864134,0.679913719975421,0.69975726161829,0.690999869022119,5.72802370809068,0,0.406638934253697,0.108005340821801,0,5.89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| ||
|EntrezGene=15959 | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=Q64345,Q5FW82 | |||
|association_with_transcript=0bp_to_ENSMUST00000102825,NM_010501,uc008hgo.1_5end | |||
|description=CAGE_peak_1_at_Ifit3_5end | |||
|id=chr19:34658018..34658023,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.53e-11!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.49e-11,51;UBERON:0005256,4.99e-07,45;UBERON:0004119,5.92e-07,118;UBERON:0000925,5.92e-07,118;UBERON:0006595,5.92e-07,118 | |||
|phase1_expression=0.480446541314382,2.09385244583617,0.454999239389536,4.83942738090928,5.50985302940982,0.16787927191189,0.233612640595526,2.84071311571468,0.703943610758334,0.468129052643987,0.34243593645101,0,21.9136934311943,2.79745287740792,4.33042690360362,4.25198061518635,0.699561878128147,12.6184866143295,6.85572168028694,5.94145512517242,12.161190491603,0.198581902401771,0,2.87986361028132,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,3.23039813075836,2.26827116783938,0.443461021310609,0,0,0,0,0.166234645358492,0.204169356262369,3.76678467663217,1.5626706890476,1.57057123192139,9.41170380849623,8.87959130445979,14.0798002379035,73.6496385157127,67.4156592609772,5.68994931701213,17.2126095756569,0.218025156380447,2.19686182734472,5.44403717407994,6.01941612989059,0,3.52343472721246,2.90144856804538,5.71359458542189,14.406528418013,3.15186783932632,25.7836046138721,0,0,0,0.338844532069132,9.78224275722253,4.04954872776629,6.92206453796882,7.104801149461,2.39680088414724,2.30530983192933,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,1.53224805702225,2.15049146558741,0,0,0,0.558365998002762,3.37657566019008,5.34793867218835,0.294628585473668,0,0,20.3703460066265,36.0476341709367,37.3925190425164,39.5794983411438,4.0798280022465,1.07940638327563,6.49776417447669,8.51251085484938,5.61777680527007,1.70430322578058,2.07828803682295,0.70667914902068,0,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0,11.3042040921869,18.9024655062435,8.16431764856536,0,0.913396434936424,0.461230994512117,7.08396410597326,5.52666923537813,9.92766071504436,14.8316980640624,28.0522752424629,5.30766331169925,0.970601099684455,1.32504911076236,2.90925151881133,5.59175283654366,5.27005434620785,1.46612694769419,5.8755122697976,0,0,0,5.09288173976397,7.32000964509802,0.376963056338593,3.47648640384553,1.53429274398198,8.51930982694196,1.29793010454206,2.95334155165917,3.23458123586242,8.33985102831127,7.15502310014011,0.520481771850815,0.919608417733892,0.720248519221397,1.35634336052144,1.56483948048054,1.7935920839879,2.34254311399322,5.95017752699736,0,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,1.4404749548556,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.983821158737019,0.154267112887378,0.930135779001631,0.536546802799238,1.5179494507732,0.822799249567402,0.820837320395476,2.02672023864639,3.65499968563331,25.0287131431798,8.45500438190342,3.78521907415429,0.617427674275707,4.29544417878937,34.3785736662608,0,0.464473343720877,0.38660238396628,0.605050573870028,3.11329261382818,21.3052701246066,6.64340686162316,16.6345944271251,29.1548842208313,38.7965120480244,23.0057622800562,29.6610404855893,13.8328351919804,7.76650965692032,0,0.114248512609729,0,0,3.49114476901726,3.71719845418688,1.64414996523069,8.11855813887812,16.4848664233444,8.88459580236964,13.3403682189217,0.333690211432188,0.196558995113203,0.449724224769707,1.01430060694251,0.482354319504834,2.29163266603278,11.5078454980324,8.43103179230184,4.94210543738547,17.2521847832825,14.5134969590716,5.30464044294753,9.34541848404313,18.1191387657131,10.6137574699941,74.6402888273083,0,0,0.169745085775188,0,0.167506257441816,4.28478553594825,3.90267295715598,2.20689201748667,4.20782910332672,2.39182152986231,25.2349504662237,20.7221978239075,21.4080606700637,164.362499493807,263.250350968255,7.37646409528554,7.72622889653251,5.29816946959713,2.57865710502847,0.163934945376675,4.54447668967871,1.57754109708128,1.17131623288992,0.430846795465598,1.19484398976276,0.891194696329576,0.566153061577665,1.21443210502468,1.46127928955656,1.18586333383957,6.74774764485795,4.40014264145633,0.712262414669021,2.28041743095006,12.0428189769951,2.65490276679926,0,0,0.188605079755898,0,3.3817866273832,31.0113951801865,2.54473610634254,1.42598951353889,1.58018378967908,1.05418608574999,2.06271086496374,12.2558258071364,0.540183282093931,0,0.214337035031592,1.24138163549592,0.713475270408282,0.329098041204242,4.26250928760439,14.54964589995,11.0152676849186,3.08739757276947,3.13283880588812,4.35953952078945,1.08563264870681,1.90995750405018,0.328281799490123,36.7265854153612,3.8939313422207,8.03093139749908,1.03193433981611,22.5937323391048,3.20226376907975,5.19438065339896,8.46479240864134,0.679913719975421,0.69975726161829,0.690999869022119,5.72802370809068,0,0.406638934253697,0.108005340821801,0,5.8957892211468,0.809186078308924,4.21532624199213,6.28214260761671,1.94422459937689,8.07741107013003,0.56369293868419,0,0,0,0.258319646955462,0.337912250981556,0.821500670520278,0.2604087696879,0.314578033277133,0,0.576060012515731,15.1685337901526,0.202725215290164,0.718976700153791,7.27556608675652,5.72885426135941,3.9736270956253,7.3319224207181,6.64602872285597,5.45218829719997,6.24895814570999,7.36031151498936,9.25849867027648,7.21588812302471,7.48012173962041,3.17422537061296,0,0.0897138566094757,0,13.1368923941889,25.7124991368119,20.5129819179337,3.42989406526505,7.022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| |||
|short_description=p1@Ifit3 | |||
}} | |||
Revision as of 17:26, 13 September 2013
| Short description: | p1@Ifit3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ifit3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:86 |
| Association with transcript: | 0bp_to_ENSMUST00000102825, NM_010501, uc008hgo.1_5end |
| EntrezGene: | Ifit3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 4.49e-11 | 51 |
| trunk mesenchyme | 4.99e-07 | 45 |
| endoderm-derived structure | 5.92e-07 | 118 |
| endoderm | 5.92e-07 | 118 |
| presumptive endoderm | 5.92e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
