FFCP PHASE1:Mm9::chr19:10708713..10708735,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71768|HGNC=|MCL_coexpression_id=1413|UniProt=Q3U515|association_with_transcript=0bp_to_ENSMUST00000055115,NM_027913,uc008gqn.2,uc008gqo.2_5end|description=CAGE_peak_1_at_Vwce_5end|id=chr19:10708713..10708735,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.84e-08,6;CL:0000677,2.84e-08,6;CL:0000584,2.84e-08,6;CL:0000066,1.35e-07,25;CL:0000075,6.24e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!9.43e-14!22;UBERON:0007499!9.43e-14!22;UBERON:0006925!9.43e-14!22;UBERON:0009497!9.43e-14!22;UBERON:0000015!9.43e-14!22;UBERON:0002423!9.43e-14!22;UBERON:0006235!9.43e-14!22;UBERON:0008835!9.43e-14!22;UBERON:0003894!9.43e-14!22;UBERON:0004161!9.43e-14!22;UBERON:0008836!9.43e-14!22;UBERON:0009854!1.23e-12!23;UBERON:0009856!1.23e-12!23;UBERON:0002365!9.64e-12!25;UBERON:0002330!9.64e-12!25;UBERON:0005172!7.34e-11!49;UBERON:0005173!7.34e-11!49;UBERON:0002417!7.34e-11!49;UBERON:0000916!7.34e-11!49;UBERON:0000160!4.31e-10!43;UBERON:0005409!3.41e-09!59;UBERON:0001007!4.32e-09!128;UBERON:0001555!4.32e-09!128;UBERON:0007026!4.32e-09!128;UBERON:0003929!7.02e-09!55;UBERON:0004119!7.13e-09!130;UBERON:0000925!7.13e-09!130;UBERON:0006595!7.13e-09!130;UBERON:0004921!2.07e-08!126;UBERON:0004185!2.07e-08!126;UBERON:0000344!2.14e-08!15;UBERON:0001242!1.67e-07!13;UBERON:0000060!1.67e-07!13;UBERON:0001262!1.67e-07!13;UBERON:0004786!1.67e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.79e-23,22;UBERON:0007499,8.79e-23,22;UBERON:0006925,8.79e-23,22;UBERON:0009497,8.79e-23,22;UBERON:0000015,8.79e-23,22;UBERON:0002423,8.79e-23,22;UBERON:0006235,8.79e-23,22;UBERON:0008835,8.79e-23,22;UBERON:0003894,8.79e-23,22;UBERON:0004161,8.79e-23,22;UBERON:0008836,8.79e-23,22;UBERON:0009854,1.71e-21,23;UBERON:0009856,1.71e-21,23;UBERON:0002365,3.11e-19,25;UBERON:0002330,3.11e-19,25;UBERON:0000160,9.41e-19,31;UBERON:0001007,2.10e-13,116;UBERON:0001555,2.10e-13,116;UBERON:0007026,2.10e-13,116;UBERON:0004119,5.93e-13,118;UBERON:0000925,5.93e-13,118;UBERON:0006595,5.93e-13,118;UBERON:0004921,3.12e-12,114;UBERON:0003929,5.97e-12,55;UBERON:0005172,1.27e-10,49;UBERON:0005173,1.27e-10,49;UBERON:0002417,1.27e-10,49;UBERON:0000916,1.27e-10,49;UBERON:0005409,6.14e-10,47;UBERON:0000344,7.82e-10,15;UBERON:0000490,1.24e-08,66;UBERON:0001242,2.88e-08,13;UBERON:0001262,2.88e-08,13;UBERON:0004786,2.88e-08,13;UBERON:0005911,6.28e-08,69;UBERON:0005256,6.50e-08,45;UBERON:0003914,2.46e-07,47;UBERON:0003104,3.52e-07,61;UBERON:0009142,3.52e-07,61|phase1_expression=0,3.83872948403297,4.54999239389536,14.8207463540347,18.0322462780685,2.35030980676646,2.80335168714631,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,0,0,0,0.765389611359628,0,0,1.91990907352088,2.2940928106717,4.59385571292016,3.4460959692726,3.44753972297422,2.09025761402011,1.26015064879965,0.665191531965914,0,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.883885756421003,0.142371680799103,0,0,0,0,0.860423876981386,2.719885334831,8.63525106620507,9.74664626171504,4.48026887097336,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0.693941307064543,0.913396434936424,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0.323533699894818,0,0,0,0,0,2.55457055208591,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,8.59088835757875,4.23120906661671,0.213288250535234,0.464473343720877,1.03093969057675,3.63030344322017,0.667134131534611,3.04361001780095,6.64340686162316,3.45867804920423,2.76468729680296,3.38226002469956,4.28920991662064,5.39291645192533,4.53889904736858,5.77509692437665,0.379335801906163,0.342745537829186,0,0.814605311381257,0,0.561086559122548,2.46622494784603,3.24742325555125,3.1399745568275,3.57851775373222,8.00422093135302,2.33583148002532,3.14494392181125,3.82265591054251,5.07150303471257,6.02942899381042,6.87489799809833,7.19240343627027,5.0261920300261,8.23684239564244,20.1275489138296,7.81495990103857,7.17686648163489,7.57736633841335,6.09951205974501,2.8946611281802,0,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,1.80899805217755,0,0,0.316036757935816,0,0,0,0,0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| ||
|EntrezGene=71768 | |||
|HGNC= | |||
|MCL_coexpression_id=1413 | |||
|UniProt=Q3U515 | |||
|association_with_transcript=0bp_to_ENSMUST00000055115,NM_027913,uc008gqn.2,uc008gqo.2_5end | |||
|description=CAGE_peak_1_at_Vwce_5end | |||
|id=chr19:10708713..10708735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.84e-08,6;CL:0000677,2.84e-08,6;CL:0000584,2.84e-08,6;CL:0000066,1.35e-07,25;CL:0000075,6.24e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.43e-14!22;UBERON:0007499!9.43e-14!22;UBERON:0006925!9.43e-14!22;UBERON:0009497!9.43e-14!22;UBERON:0000015!9.43e-14!22;UBERON:0002423!9.43e-14!22;UBERON:0006235!9.43e-14!22;UBERON:0008835!9.43e-14!22;UBERON:0003894!9.43e-14!22;UBERON:0004161!9.43e-14!22;UBERON:0008836!9.43e-14!22;UBERON:0009854!1.23e-12!23;UBERON:0009856!1.23e-12!23;UBERON:0002365!9.64e-12!25;UBERON:0002330!9.64e-12!25;UBERON:0005172!7.34e-11!49;UBERON:0005173!7.34e-11!49;UBERON:0002417!7.34e-11!49;UBERON:0000916!7.34e-11!49;UBERON:0000160!4.31e-10!43;UBERON:0005409!3.41e-09!59;UBERON:0001007!4.32e-09!128;UBERON:0001555!4.32e-09!128;UBERON:0007026!4.32e-09!128;UBERON:0003929!7.02e-09!55;UBERON:0004119!7.13e-09!130;UBERON:0000925!7.13e-09!130;UBERON:0006595!7.13e-09!130;UBERON:0004921!2.07e-08!126;UBERON:0004185!2.07e-08!126;UBERON:0000344!2.14e-08!15;UBERON:0001242!1.67e-07!13;UBERON:0000060!1.67e-07!13;UBERON:0001262!1.67e-07!13;UBERON:0004786!1.67e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.79e-23,22;UBERON:0007499,8.79e-23,22;UBERON:0006925,8.79e-23,22;UBERON:0009497,8.79e-23,22;UBERON:0000015,8.79e-23,22;UBERON:0002423,8.79e-23,22;UBERON:0006235,8.79e-23,22;UBERON:0008835,8.79e-23,22;UBERON:0003894,8.79e-23,22;UBERON:0004161,8.79e-23,22;UBERON:0008836,8.79e-23,22;UBERON:0009854,1.71e-21,23;UBERON:0009856,1.71e-21,23;UBERON:0002365,3.11e-19,25;UBERON:0002330,3.11e-19,25;UBERON:0000160,9.41e-19,31;UBERON:0001007,2.10e-13,116;UBERON:0001555,2.10e-13,116;UBERON:0007026,2.10e-13,116;UBERON:0004119,5.93e-13,118;UBERON:0000925,5.93e-13,118;UBERON:0006595,5.93e-13,118;UBERON:0004921,3.12e-12,114;UBERON:0003929,5.97e-12,55;UBERON:0005172,1.27e-10,49;UBERON:0005173,1.27e-10,49;UBERON:0002417,1.27e-10,49;UBERON:0000916,1.27e-10,49;UBERON:0005409,6.14e-10,47;UBERON:0000344,7.82e-10,15;UBERON:0000490,1.24e-08,66;UBERON:0001242,2.88e-08,13;UBERON:0001262,2.88e-08,13;UBERON:0004786,2.88e-08,13;UBERON:0005911,6.28e-08,69;UBERON:0005256,6.50e-08,45;UBERON:0003914,2.46e-07,47;UBERON:0003104,3.52e-07,61;UBERON:0009142,3.52e-07,61 | |||
|phase1_expression=0,3.83872948403297,4.54999239389536,14.8207463540347,18.0322462780685,2.35030980676646,2.80335168714631,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.809901069559304,0,0,0,0,0.765389611359628,0,0,1.91990907352088,2.2940928106717,4.59385571292016,3.4460959692726,3.44753972297422,2.09025761402011,1.26015064879965,0.665191531965914,0,0,0,0.577703239502549,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.883885756421003,0.142371680799103,0,0,0,0,0.860423876981386,2.719885334831,8.63525106620507,9.74664626171504,4.48026887097336,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0.693941307064543,0.913396434936424,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0.741584903203122,0,0,0.323533699894818,0,0,0,0,0,2.55457055208591,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.173824320192276,0,0,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0,0.431135985865684,0.189106080167819,0.351902248327898,0.657587197282725,0,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,8.59088835757875,4.23120906661671,0.213288250535234,0.464473343720877,1.03093969057675,3.63030344322017,0.667134131534611,3.04361001780095,6.64340686162316,3.45867804920423,2.76468729680296,3.38226002469956,4.28920991662064,5.39291645192533,4.53889904736858,5.77509692437665,0.379335801906163,0.342745537829186,0,0.814605311381257,0,0.561086559122548,2.46622494784603,3.24742325555125,3.1399745568275,3.57851775373222,8.00422093135302,2.33583148002532,3.14494392181125,3.82265591054251,5.07150303471257,6.02942899381042,6.87489799809833,7.19240343627027,5.0261920300261,8.23684239564244,20.1275489138296,7.81495990103857,7.17686648163489,7.57736633841335,6.09951205974501,2.8946611281802,0,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,1.80899805217755,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0,0,0,6.99554007911642,0,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.686334519619568,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0.87345025498471,0.404593039154462,0.909188012978695,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0,0.25984164595559,0.716106782669926,0.39736270956253,0.120195449519969,0,0.100966449948148,0.304827226619999,0.201652370273681,0.194915761479505,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.31136204275253,0,0.682934423016537,1.45864030240976,0.419226325255965,0.367687016900028,0.666740183404846,1.44224540067226,0.64183841918363,1.51618327058278,1.2673964994512,0.943131706930381,0.37456602987953,1.21647789569252,1.26358031702349,0,1.39061191133827,0.964546102318525,1.64834360321323,0.441596760403192,0.685738504770831,1.06485483695602,0.953744759789284,1.30811774969096,0.846984423737976,1.69229215783353,1.09756783723664,0.789209134313529,0.814824683075171,0.561142271657738,1.06771516311757,1.28055827088233,2.45538625901814,1.54936841185966,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.191288332068843,0,0.231867835620421 | |||
|short_description=p1@Vwce | |||
}} |
Revision as of 16:59, 13 September 2013
Short description: | p1@Vwce |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vwce_5end |
Coexpression cluster: | MCL_coexpression_mm9:1413 |
Association with transcript: | 0bp_to_ENSMUST00000055115, NM_027913, uc008gqn.2, uc008gqo.2_5end |
EntrezGene: | Vwce |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.84e-08 | 6 |
gut absorptive cell | 2.84e-08 | 6 |
enterocyte | 2.84e-08 | 6 |
epithelial cell | 1.35e-07 | 25 |
columnar/cuboidal epithelial cell | 6.24e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.