FFCP PHASE1:Mm9::chr19:10347420..10347423,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:10347420..10347423,-|id=chr19:10347420..10347423,-|ontology_enrichment_celltype=CL:0000107!1.15e-32!9;CL:0000540!1.81e-11!33;CL:0000047!1.81e-11!33;CL:0000031!1.81e-11!33;CL:0000404!1.81e-11!33;CL:0000221!2.26e-11!44;CL:0000133!2.26e-11!44;CL:0002319!5.86e-10!43;CL:0000393!2.18e-09!39;CL:0000211!2.18e-09!39;CL:0000055!3.03e-08!50;CL:0002321!2.24e-07!70;CL:0000220!2.24e-07!70|ontology_enrichment_celltype_v019_2=CL:0000107,1.70e-67,9;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002321,6.38e-09,70;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.15e-32!9;UBERON:0000010!2.51e-32!11;UBERON:0000011!3.94e-12!3;UBERON:0002005!6.48e-12!3;UBERON:0005428!6.48e-12!3;UBERON:0000013!8.28e-12!3;UBERON:0000073!4.34e-09!75;UBERON:0001016!4.34e-09!75;UBERON:0001017!3.84e-08!73;UBERON:0005743!3.84e-08!73;UBERON:0004121!9.40e-07!102;UBERON:0000924!9.40e-07!102;UBERON:0006601!9.40e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.70e-67,9;UBERON:0000010,2.49e-55,11;UBERON:0000011,3.73e-38,3;UBERON:0010313,1.31e-17,3;UBERON:0002342,1.31e-17,3;UBERON:0002005,1.31e-17,3;UBERON:0005428,1.31e-17,3;UBERON:0005062,1.31e-17,3;UBERON:0000013,1.93e-17,3;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0.226714680320357,0,0,0,0,0.649776417447669,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94652465824877,2.73307121007647,1.50796378412959,1.19484398976276,4.01037613348309,3.39691836946599,1.21443210502468,2.04579100537918,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:10347420..10347423,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:10347420..10347423,- | |||
|id=chr19:10347420..10347423,- | |||
|ontology_enrichment_celltype=CL:0000107!1.15e-32!9;CL:0000540!1.81e-11!33;CL:0000047!1.81e-11!33;CL:0000031!1.81e-11!33;CL:0000404!1.81e-11!33;CL:0000221!2.26e-11!44;CL:0000133!2.26e-11!44;CL:0002319!5.86e-10!43;CL:0000393!2.18e-09!39;CL:0000211!2.18e-09!39;CL:0000055!3.03e-08!50;CL:0002321!2.24e-07!70;CL:0000220!2.24e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.70e-67,9;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002321,6.38e-09,70;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.15e-32!9;UBERON:0000010!2.51e-32!11;UBERON:0000011!3.94e-12!3;UBERON:0002005!6.48e-12!3;UBERON:0005428!6.48e-12!3;UBERON:0000013!8.28e-12!3;UBERON:0000073!4.34e-09!75;UBERON:0001016!4.34e-09!75;UBERON:0001017!3.84e-08!73;UBERON:0005743!3.84e-08!73;UBERON:0004121!9.40e-07!102;UBERON:0000924!9.40e-07!102;UBERON:0006601!9.40e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.70e-67,9;UBERON:0000010,2.49e-55,11;UBERON:0000011,3.73e-38,3;UBERON:0010313,1.31e-17,3;UBERON:0002342,1.31e-17,3;UBERON:0002005,1.31e-17,3;UBERON:0005428,1.31e-17,3;UBERON:0005062,1.31e-17,3;UBERON:0000013,1.93e-17,3;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0.226714680320357,0,0,0,0,0.649776417447669,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94652465824877,2.73307121007647,1.50796378412959,1.19484398976276,4.01037613348309,3.39691836946599,1.21443210502468,2.04579100537918,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:10347420..10347423,- | |||
}} |
Revision as of 16:58, 13 September 2013
Short description: | p@chr19:10347420..10347423, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:10347420..10347423, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.70e-67 | 9 |
neuron | 1.03e-18 | 33 |
neuronal stem cell | 1.03e-18 | 33 |
neuroblast | 1.03e-18 | 33 |
electrically signaling cell | 1.03e-18 | 33 |
electrically responsive cell | 7.07e-16 | 39 |
electrically active cell | 7.07e-16 | 39 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
embryonic cell | 6.38e-09 | 70 |
somatic stem cell | 7.08e-07 | 91 |
multi fate stem cell | 7.08e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.70e-67 | 9 |
peripheral nervous system | 2.49e-55 | 11 |
parasympathetic nervous system | 3.73e-38 | 3 |
neural crest-derived structure | 1.31e-17 | 3 |
neural crest | 1.31e-17 | 3 |
enteric nervous system | 1.31e-17 | 3 |
vagal neural crest | 1.31e-17 | 3 |
neural fold | 1.31e-17 | 3 |
sympathetic nervous system | 1.93e-17 | 3 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.