FFCP PHASE1:Hg19::chr5:88018378..88018393,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1966|description=CAGE_peak_at_chr5:88018378..88018393,-|id=chr5:88018378..88018393,-|ontology_enrichment_celltype=CL:0000037!4.92e-12!172;CL:0000566!4.92e-12!172;CL:0002032!5.39e-11!165;CL:0000837!5.39e-11!165;CL:0000945!5.65e-11!24;CL:0000826!5.65e-11!24;CL:0000988!2.10e-10!182;CL:0000763!4.90e-08!112;CL:0000049!4.90e-08!112;CL:0002087!4.97e-08!119;CL:0000236!6.00e-08!14;CL:0000738!5.00e-07!140|ontology_enrichment_celltype_v019=CL:0000236;9.56e-08;13|ontology_enrichment_celltype_v019_2=CL:0000236,1.24e-09,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!3.13e-10!31;DOID:2531!1.25e-09!51;DOID:0060083!1.25e-09!51;DOID:1240!6.94e-09!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.50e-23!115;UBERON:0001950!3.83e-14!20;UBERON:0002020!4.81e-14!34;UBERON:0003528!4.81e-14!34;UBERON:0002619!6.58e-14!22;UBERON:0001893!9.89e-14!34;UBERON:0001049!1.10e-13!57;UBERON:0005068!1.10e-13!57;UBERON:0006241!1.10e-13!57;UBERON:0007135!1.10e-13!57;UBERON:0003080!1.27e-13!42;UBERON:0002791!4.35e-13!33;UBERON:0002780!4.67e-13!41;UBERON:0001890!4.67e-13!41;UBERON:0006240!4.67e-13!41;UBERON:0001869!4.81e-13!32;UBERON:0002616!1.82e-12!59;UBERON:0000956!1.90e-12!25;UBERON:0000203!1.90e-12!25;UBERON:0000955!8.70e-12!69;UBERON:0006238!8.70e-12!69;UBERON:0001017!2.41e-10!82;UBERON:0005743!1.27e-09!86;UBERON:0003075!4.71e-09!86;UBERON:0007284!4.71e-09!86;UBERON:0002346!1.17e-08!90;UBERON:0000073!4.79e-08!94;UBERON:0001016!4.79e-08!94;UBERON:0003056!4.60e-07!61|ontology_enrichment_uberon_v019=UBERON:0002619;1.75e-23;22!UBERON:0001950;1.52e-22;20!UBERON:0000956;2.35e-20;25!UBERON:0000203;2.35e-20;25!UBERON:0001869;3.43e-14;32!UBERON:0002791;8.38e-14;32!UBERON:0001893;2.91e-12;34!UBERON:0003528;5.59e-12;34!UBERON:0002020;5.59e-12;34!UBERON:0002021;8.20e-11;5!UBERON:0002780;5.08e-09;41!UBERON:0001890;5.08e-09;41!UBERON:0000200;2.36e-08;6!UBERON:0005090;1.06e-07;2!UBERON:0001630;1.06e-07;2!UBERON:0001871;2.70e-07;6!UBERON:0002702;2.85e-07;2!UBERON:0002771;6.36e-07;2!UBERON:0002081;6.36e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.77e-24,22;UBERON:0001950,7.68e-23,20;UBERON:0000956,1.28e-20,25;UBERON:0000203,1.28e-20,25;UBERON:0002791,1.75e-15,32;UBERON:0001869,1.75e-15,32;UBERON:0003528,2.13e-14,34;UBERON:0002020,2.13e-14,34;UBERON:0001893,2.13e-14,34;UBERON:0002780,2.02e-11,41;UBERON:0001890,2.02e-11,41;UBERON:0003080,2.02e-11,41;UBERON:0006240,2.02e-11,41;UBERON:0002021,7.22e-11,5;UBERON:0007023,4.98e-09,114;UBERON:0000955,9.87e-09,68;UBERON:0006238,9.87e-09,68;UBERON:0000200,1.72e-08,6;UBERON:0000073,3.80e-08,53;UBERON:0002616,3.80e-08,53;UBERON:0003056,9.14e-08,61;UBERON:0001017,9.15e-08,81;UBERON:0005090,1.15e-07,2;UBERON:0001630,1.15e-07,2;UBERON:0001049,1.50e-07,56;UBERON:0005068,1.50e-07,56;UBERON:0006241,1.50e-07,56;UBERON:0007135,1.50e-07,56;UBERON:0001016,1.74e-07,89;UBERON:0001871,1.91e-07,6;UBERON:0002702,3.04e-07,2;UBERON:0002771,3.66e-07,2;UBERON:0002081,5.93e-07,2;UBERON:0010227,5.93e-07,2;UBERON:0000341,9.27e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0.273748850145768,0,0.229240217243854,0.410502947249729,0.472264687882075,0,0.383829398097213,0,0,0,0,0,0.426507697462265,0,0.553995408531877,0,0.434021741431704,1.11957737119962,0,0.515151135268373,1.01778767145695,0,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,1.22433556948361,0.320929027076094,1.27867425159808,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0,0,1.10483290796269,0.316462387440884,0.633765858935825,0,0,0.112328631146495,0.150176892841506,0.48217676009124,0.570025487482497,0,0,0,1.63841583378639,1.77901850772711,0.853460445133014,1.20118796110804,0.574752439954483,0,0.954053754535364,2.84606484554724,4.69789751496751,2.29363936875137,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0.238490624305342,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,1.83831540172934,0,0.357198913136319,1.12264686313085,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1966 | |||
|description=CAGE_peak_at_chr5:88018378..88018393,- | |||
|id=chr5:88018378..88018393,- | |||
|ontology_enrichment_celltype=CL:0000037!4.92e-12!172;CL:0000566!4.92e-12!172;CL:0002032!5.39e-11!165;CL:0000837!5.39e-11!165;CL:0000945!5.65e-11!24;CL:0000826!5.65e-11!24;CL:0000988!2.10e-10!182;CL:0000763!4.90e-08!112;CL:0000049!4.90e-08!112;CL:0002087!4.97e-08!119;CL:0000236!6.00e-08!14;CL:0000738!5.00e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.56e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.24e-09,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.13e-10!31;DOID:2531!1.25e-09!51;DOID:0060083!1.25e-09!51;DOID:1240!6.94e-09!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-23!115;UBERON:0001950!3.83e-14!20;UBERON:0002020!4.81e-14!34;UBERON:0003528!4.81e-14!34;UBERON:0002619!6.58e-14!22;UBERON:0001893!9.89e-14!34;UBERON:0001049!1.10e-13!57;UBERON:0005068!1.10e-13!57;UBERON:0006241!1.10e-13!57;UBERON:0007135!1.10e-13!57;UBERON:0003080!1.27e-13!42;UBERON:0002791!4.35e-13!33;UBERON:0002780!4.67e-13!41;UBERON:0001890!4.67e-13!41;UBERON:0006240!4.67e-13!41;UBERON:0001869!4.81e-13!32;UBERON:0002616!1.82e-12!59;UBERON:0000956!1.90e-12!25;UBERON:0000203!1.90e-12!25;UBERON:0000955!8.70e-12!69;UBERON:0006238!8.70e-12!69;UBERON:0001017!2.41e-10!82;UBERON:0005743!1.27e-09!86;UBERON:0003075!4.71e-09!86;UBERON:0007284!4.71e-09!86;UBERON:0002346!1.17e-08!90;UBERON:0000073!4.79e-08!94;UBERON:0001016!4.79e-08!94;UBERON:0003056!4.60e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.75e-23;22!UBERON:0001950;1.52e-22;20!UBERON:0000956;2.35e-20;25!UBERON:0000203;2.35e-20;25!UBERON:0001869;3.43e-14;32!UBERON:0002791;8.38e-14;32!UBERON:0001893;2.91e-12;34!UBERON:0003528;5.59e-12;34!UBERON:0002020;5.59e-12;34!UBERON:0002021;8.20e-11;5!UBERON:0002780;5.08e-09;41!UBERON:0001890;5.08e-09;41!UBERON:0000200;2.36e-08;6!UBERON:0005090;1.06e-07;2!UBERON:0001630;1.06e-07;2!UBERON:0001871;2.70e-07;6!UBERON:0002702;2.85e-07;2!UBERON:0002771;6.36e-07;2!UBERON:0002081;6.36e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.77e-24,22;UBERON:0001950,7.68e-23,20;UBERON:0000956,1.28e-20,25;UBERON:0000203,1.28e-20,25;UBERON:0002791,1.75e-15,32;UBERON:0001869,1.75e-15,32;UBERON:0003528,2.13e-14,34;UBERON:0002020,2.13e-14,34;UBERON:0001893,2.13e-14,34;UBERON:0002780,2.02e-11,41;UBERON:0001890,2.02e-11,41;UBERON:0003080,2.02e-11,41;UBERON:0006240,2.02e-11,41;UBERON:0002021,7.22e-11,5;UBERON:0007023,4.98e-09,114;UBERON:0000955,9.87e-09,68;UBERON:0006238,9.87e-09,68;UBERON:0000200,1.72e-08,6;UBERON:0000073,3.80e-08,53;UBERON:0002616,3.80e-08,53;UBERON:0003056,9.14e-08,61;UBERON:0001017,9.15e-08,81;UBERON:0005090,1.15e-07,2;UBERON:0001630,1.15e-07,2;UBERON:0001049,1.50e-07,56;UBERON:0005068,1.50e-07,56;UBERON:0006241,1.50e-07,56;UBERON:0007135,1.50e-07,56;UBERON:0001016,1.74e-07,89;UBERON:0001871,1.91e-07,6;UBERON:0002702,3.04e-07,2;UBERON:0002771,3.66e-07,2;UBERON:0002081,5.93e-07,2;UBERON:0010227,5.93e-07,2;UBERON:0000341,9.27e-07,2 | |||
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| |||
|short_description=p@chr5:88018378..88018393,- | |||
}} |
Revision as of 16:48, 13 September 2013
Short description: | p@chr5:88018378..88018393, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:88018378..88018393, - |
Coexpression cluster: | C1966_occipital_brain_temporal_parietal_skeletal_medial_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.24e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 8.77e-24 | 22 |
neocortex | 7.68e-23 | 20 |
cerebral cortex | 1.28e-20 | 25 |
pallium | 1.28e-20 | 25 |
regional part of telencephalon | 1.75e-15 | 32 |
cerebral hemisphere | 1.75e-15 | 32 |
brain grey matter | 2.13e-14 | 34 |
gray matter | 2.13e-14 | 34 |
telencephalon | 2.13e-14 | 34 |
regional part of forebrain | 2.02e-11 | 41 |
forebrain | 2.02e-11 | 41 |
anterior neural tube | 2.02e-11 | 41 |
future forebrain | 2.02e-11 | 41 |
occipital lobe | 7.22e-11 | 5 |
adult organism | 4.98e-09 | 114 |
brain | 9.87e-09 | 68 |
future brain | 9.87e-09 | 68 |
gyrus | 1.72e-08 | 6 |
regional part of nervous system | 3.80e-08 | 53 |
regional part of brain | 3.80e-08 | 53 |
pre-chordal neural plate | 9.14e-08 | 61 |
central nervous system | 9.15e-08 | 81 |
muscle structure | 1.15e-07 | 2 |
muscle organ | 1.15e-07 | 2 |
neural tube | 1.50e-07 | 56 |
neural rod | 1.50e-07 | 56 |
future spinal cord | 1.50e-07 | 56 |
neural keel | 1.50e-07 | 56 |
nervous system | 1.74e-07 | 89 |
temporal lobe | 1.91e-07 | 6 |
middle frontal gyrus | 3.04e-07 | 2 |
middle temporal gyrus | 3.66e-07 | 2 |
cardiac atrium | 5.93e-07 | 2 |
future cardiac atrium | 5.93e-07 | 2 |
throat | 9.27e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.