FFCP PHASE1:Mm9::chr18:75120906..75120922,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16891|HGNC=|MCL_coexpression_id=56|UniProt=C0LQ91,Q9WVG5,Q3U5K0,Q3U713,Q3U807,Q3UDI6|association_with_transcript=0bp_to_ENSMUST00000066532,NM_010720,uc008fpu.2,uc008fpv.2_5end|description=CAGE_peak_1_at_Lipg_5end|id=chr18:75120906..75120922,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!3.51e-10!24;UBERON:0005156!1.21e-09!26;UBERON:0000990!1.21e-09!26;UBERON:0000991!4.26e-07!18;UBERON:0005564!4.26e-07!18;UBERON:0004176!8.45e-07!17;UBERON:0009196!8.45e-07!17;UBERON:0009117!8.45e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003133,2.19e-10,24;UBERON:0005156,1.33e-09,26;UBERON:0000990,1.33e-09,26;UBERON:0000991,3.14e-07,18;UBERON:0005564,3.14e-07,18;UBERON:0004176,6.32e-07,17;UBERON:0009196,6.32e-07,17;UBERON:0009117,6.32e-07,17;UBERON:0003135,8.40e-07,15|phase1_expression=0.320297694209588,4.18770489167233,4.54999239389536,11.1911758183527,8.01433167914156,17.2915650069246,18.4553986070465,0,60.1167843587617,66.2402609491241,0.34243593645101,1.83475965689274,0.171200729931206,0,0.999329285446988,0,0.699561878128147,0.157731082679119,0,1.27316895539409,17.5189177711204,0.397163804803541,0.261199789138935,5.91971964335605,5.73523202667925,4.01962374880514,5.1691439539089,8.40337807474967,4.94060890586572,11.5933859689568,9.97787297948871,0,0.61506478758457,0,24.5523876788583,23.4390849955474,33.6879437832909,52.3164538421135,53.9121387721422,39.2642807980349,4.70585190424811,9.56263678941824,2.42755176515577,1.1330713617802,0.506884656097573,2.56965453026354,0.782391344348039,36.4102011155346,0.219686182734472,1.55543919259427,29.6771213845769,25.8754615856949,0.335565212115473,0.725362142011344,0,1.80081605225163,0.573066879877513,2.06268836910977,16.9945827122062,13.2247744818008,10.775133859605,11.8595586224196,10.6715375533337,0.449949858640699,0,0,2.99600110518405,2.30530983192933,12.2353742524004,13.095576018174,10.0955981448663,0.571301968807607,0.220868540951614,22.7832886539815,24.4405951096503,32.1726575313507,0,0,0.46081959976873,6.06676923558892,4.11694396210843,5.73004707612436,0.279182999001381,0,0.30559649555362,2.06240009831567,0.569486723196412,4.28718725398191,1.28734528666413,1.20914496170857,1.15945795480671,8.60423876981386,11.5595126730318,37.2395202230094,69.5260766669006,107.526452903361,20.7857741794993,0.681721290312231,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,6.27824018932521,6.08063677140237,4.54972000513305,31.5147508024606,44.5373159873135,0.742210695324124,4.8575891494518,1.52232739156071,1.84492397804847,0.753613202763113,1.17588707135705,3.64433114856059,25.9554716121093,3.18118585223806,4.42305275974937,3.07357014900077,4.19598885074748,6.78825354389311,65.2371164263428,0.292780797011547,0,15.8383374229327,0,0,0,0.299581278809645,0.915001205637253,4.39790232395025,4.17178368461463,2.81287003063364,0.20778804455956,0.324482526135515,5.80484373946803,46.1549860963445,383.127701785451,1.47309299120532,1.56144531555244,1.37941262660084,1.80062129805349,0.452114453507145,0.204109497453984,0.640568601424249,1.21812241927647,2.84573707812917,3.23351989399263,1.32374256117473,1.40760899331159,2.19195732427575,5.28289773528636,4.52727816478817,7.20237477427802,11.3449532086541,0,0,0,1.65700618028402,3.04883877975425,0.720248245844059,0.23674473558521,0.393528463494808,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0.146199987425332,1.3173006917463,0.134206418760372,0.841159794256509,2.46971069710283,1.32167513193519,22.2138475997377,1.91959425481711,5.57368012465052,10.9537342123779,7.86565746031036,9.33987784148455,6.46767128782701,9.49058123089023,0.658795818896044,2.5133520880027,1.98956472041151,2.9244613067868,9.88701349519644,15.1296634912286,12.7450414882795,4.55202962287396,5.02693455482807,3.38123207019241,6.31319116320474,9.11576689687841,9.11765658574141,9.67519018001136,6.7900668070617,10.3619160375307,6.41665252393363,89.528693380319,0.667380422864376,0.982794975566015,0.899448449539415,0.608580364165509,0.72353147925725,1.2731292589071,0.863088412352432,0.486405680325106,0.549122826376163,0,2.23284568601102,1.24815069245824,9.09283960609602,17.5809465251474,6.27176577772377,46.3730507318178,0.947457058852424,1.95557971730431,2.71592137240301,1.87752198630802,4.02015017860358,5.95109102215034,32.3921855443946,17.1822307075748,18.6030339304971,23.4398509926506,82.7509739314477,51.6328095779028,76.8086501067827,0,9.79030230873677,24.5882136509518,3.86311444826625,0,0.234423373184406,4.26230857979356,0.504941854408746,0.631016438832513,0.780877488593277,0,0.477937595905104,0,0,0.809621403349789,0.876767573733936,0,2.57057053137446,127.88801677265,8.90328018336276,4.39794790254655,9.40329700943452,0,2.6705869977048,3.02323556964751,0.943025398779491,1.18120757152309,0.614870295887855,1.29214146584111,0,0.356497378384721,0.632073515871632,3.16255825724996,1.03135543248187,0.340439605753788,5.04171063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| ||
|EntrezGene=16891 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=C0LQ91,Q9WVG5,Q3U5K0,Q3U713,Q3U807,Q3UDI6 | |||
|association_with_transcript=0bp_to_ENSMUST00000066532,NM_010720,uc008fpu.2,uc008fpv.2_5end | |||
|description=CAGE_peak_1_at_Lipg_5end | |||
|id=chr18:75120906..75120922,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!3.51e-10!24;UBERON:0005156!1.21e-09!26;UBERON:0000990!1.21e-09!26;UBERON:0000991!4.26e-07!18;UBERON:0005564!4.26e-07!18;UBERON:0004176!8.45e-07!17;UBERON:0009196!8.45e-07!17;UBERON:0009117!8.45e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,2.19e-10,24;UBERON:0005156,1.33e-09,26;UBERON:0000990,1.33e-09,26;UBERON:0000991,3.14e-07,18;UBERON:0005564,3.14e-07,18;UBERON:0004176,6.32e-07,17;UBERON:0009196,6.32e-07,17;UBERON:0009117,6.32e-07,17;UBERON:0003135,8.40e-07,15 | |||
|phase1_expression=0.320297694209588,4.18770489167233,4.54999239389536,11.1911758183527,8.01433167914156,17.2915650069246,18.4553986070465,0,60.1167843587617,66.2402609491241,0.34243593645101,1.83475965689274,0.171200729931206,0,0.999329285446988,0,0.699561878128147,0.157731082679119,0,1.27316895539409,17.5189177711204,0.397163804803541,0.261199789138935,5.91971964335605,5.73523202667925,4.01962374880514,5.1691439539089,8.40337807474967,4.94060890586572,11.5933859689568,9.97787297948871,0,0.61506478758457,0,24.5523876788583,23.4390849955474,33.6879437832909,52.3164538421135,53.9121387721422,39.2642807980349,4.70585190424811,9.56263678941824,2.42755176515577,1.1330713617802,0.506884656097573,2.56965453026354,0.782391344348039,36.4102011155346,0.219686182734472,1.55543919259427,29.6771213845769,25.8754615856949,0.335565212115473,0.725362142011344,0,1.80081605225163,0.573066879877513,2.06268836910977,16.9945827122062,13.2247744818008,10.775133859605,11.8595586224196,10.6715375533337,0.449949858640699,0,0,2.99600110518405,2.30530983192933,12.2353742524004,13.095576018174,10.0955981448663,0.571301968807607,0.220868540951614,22.7832886539815,24.4405951096503,32.1726575313507,0,0,0.46081959976873,6.06676923558892,4.11694396210843,5.73004707612436,0.279182999001381,0,0.30559649555362,2.06240009831567,0.569486723196412,4.28718725398191,1.28734528666413,1.20914496170857,1.15945795480671,8.60423876981386,11.5595126730318,37.2395202230094,69.5260766669006,107.526452903361,20.7857741794993,0.681721290312231,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,6.27824018932521,6.08063677140237,4.54972000513305,31.5147508024606,44.5373159873135,0.742210695324124,4.8575891494518,1.52232739156071,1.84492397804847,0.753613202763113,1.17588707135705,3.64433114856059,25.9554716121093,3.18118585223806,4.42305275974937,3.07357014900077,4.19598885074748,6.78825354389311,65.2371164263428,0.292780797011547,0,15.8383374229327,0,0,0,0.299581278809645,0.915001205637253,4.39790232395025,4.17178368461463,2.81287003063364,0.20778804455956,0.324482526135515,5.80484373946803,46.1549860963445,383.127701785451,1.47309299120532,1.56144531555244,1.37941262660084,1.80062129805349,0.452114453507145,0.204109497453984,0.640568601424249,1.21812241927647,2.84573707812917,3.23351989399263,1.32374256117473,1.40760899331159,2.19195732427575,5.28289773528636,4.52727816478817,7.20237477427802,11.3449532086541,0,0,0,1.65700618028402,3.04883877975425,0.720248245844059,0.23674473558521,0.393528463494808,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0.146199987425332,1.3173006917463,0.134206418760372,0.841159794256509,2.46971069710283,1.32167513193519,22.2138475997377,1.91959425481711,5.57368012465052,10.9537342123779,7.86565746031036,9.33987784148455,6.46767128782701,9.49058123089023,0.658795818896044,2.5133520880027,1.98956472041151,2.9244613067868,9.88701349519644,15.1296634912286,12.7450414882795,4.55202962287396,5.02693455482807,3.38123207019241,6.31319116320474,9.11576689687841,9.11765658574141,9.67519018001136,6.7900668070617,10.3619160375307,6.41665252393363,89.528693380319,0.667380422864376,0.982794975566015,0.899448449539415,0.608580364165509,0.72353147925725,1.2731292589071,0.863088412352432,0.486405680325106,0.549122826376163,0,2.23284568601102,1.24815069245824,9.09283960609602,17.5809465251474,6.27176577772377,46.3730507318178,0.947457058852424,1.95557971730431,2.71592137240301,1.87752198630802,4.02015017860358,5.95109102215034,32.3921855443946,17.1822307075748,18.6030339304971,23.4398509926506,82.7509739314477,51.6328095779028,76.8086501067827,0,9.79030230873677,24.5882136509518,3.86311444826625,0,0.234423373184406,4.26230857979356,0.504941854408746,0.631016438832513,0.780877488593277,0,0.477937595905104,0,0,0.809621403349789,0.876767573733936,0,2.57057053137446,127.88801677265,8.90328018336276,4.39794790254655,9.40329700943452,0,2.6705869977048,3.02323556964751,0.943025398779491,1.18120757152309,0.614870295887855,1.29214146584111,0,0.356497378384721,0.632073515871632,3.16255825724996,1.03135543248187,0.340439605753788,5.04171063287669,4.65691261617916,2.14337035031592,2.48276327099183,2.14042581122485,2.30368628842969,0.913394847343798,1269.57394062467,248.479019123261,0.882113592219848,7.74965388824956,4.19807509409354,15.1988570818953,12.2953514323231,10.3408766839389,2.91480836629851,0.18542530201051,7.00570611271196,0.412773735926445,0.370389054739423,1.31857919903284,0.546776910884101,0,0.169978429993855,0.139951452323658,0.276399947608848,3.81868247206045,1.73984796469624,2.03319467126849,4.42821897369385,3.97267762427491,3.9305261474312,2.56242258131159,2.47960367176008,7.32916637555283,29.8114438571124,1.24267862617385,19.7292528539467,20.7827999001131,29.6170697918205,43.3626150007226,37.7146684554975,26.6950678275429,6.33729088687071,8.20287624516886,12.4782619866596,26.0910850492087,23.9064905194028,3.16011120628178,9.93353554921804,14.9957997460648,14.4212113505352,10.7416017400489,12.5169253512197,6.4905542740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| |||
|short_description=p1@Lipg | |||
}} | |||
Revision as of 16:44, 13 September 2013
| Short description: | p1@Lipg |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Lipg_5end |
| Coexpression cluster: | MCL_coexpression_mm9:56 |
| Association with transcript: | 0bp_to_ENSMUST00000066532, NM_010720, uc008fpu.2, uc008fpv.2_5end |
| EntrezGene: | Lipg |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| reproductive organ | 2.19e-10 | 24 |
| reproductive structure | 1.33e-09 | 26 |
| reproductive system | 1.33e-09 | 26 |
| gonad | 3.14e-07 | 18 |
| gonad primordium | 3.14e-07 | 18 |
| external genitalia | 6.32e-07 | 17 |
| indifferent external genitalia | 6.32e-07 | 17 |
| indifferent gonad | 6.32e-07 | 17 |
| male reproductive organ | 8.40e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
