FFCP PHASE1:Hg19::chr5:78281692..78281703,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=411|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=714|TSSclassifier=S|UniProt=E5RHC4|association_with_transcript=-31bp_to_ENST00000521117_5end|description=CAGE_peak_18_at_ARSB_5end|id=chr5:78281692..78281703,-|ontology_enrichment_celltype=CL:0002580!7.69e-07!3;CL:0002334!9.67e-07!12|ontology_enrichment_celltype_v019=CL:0002580;3.59e-30;3!CL:0002617;2.45e-12;2!CL:0000153;7.39e-11;9!CL:0000447;7.39e-11;9!CL:0002615;1.17e-08;3!CL:0000214;1.17e-08;3!CL:0000182;2.65e-08;12!CL:0002334;2.65e-08;12!CL:0000136;9.84e-08;13!CL:0000327;7.09e-07;15|ontology_enrichment_celltype_v019_2=CL:0002580,2.67e-30,3;CL:0002617,2.32e-12,2;CL:0000153,7.58e-11,9;CL:0000447,7.58e-11,9;CL:0000214,1.21e-08,3;CL:0002615,1.51e-08,3;CL:0002334,2.46e-08,12;CL:0000182,2.75e-08,12;CL:0000327,7.20e-07,15;CL:0000136,8.83e-07,15|ontology_enrichment_development_v019=UBERON:0004161;5.63e-09;11!UBERON:0009497;9.84e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!4.19e-08!6;UBERON:0002358!4.19e-08!6;UBERON:0003684!4.19e-08!6;UBERON:0001178!4.19e-08!6|ontology_enrichment_uberon_v019=UBERON:0000310;1.98e-20;10!UBERON:0001443;1.21e-18;11!UBERON:0004457;9.23e-11;9!UBERON:0000042;9.23e-11;9!UBERON:0006915;1.17e-08;3!UBERON:0007616;1.17e-08;3!UBERON:0002217;1.17e-08;3!UBERON:0002018;1.17e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.67e-20,10;UBERON:0001443,1.04e-18,11;UBERON:0006915,1.21e-08,3;UBERON:0007616,1.21e-08,3;UBERON:0002217,1.21e-08,3;UBERON:0002018,1.21e-08,3;UBERON:0004457,3.07e-08,12;UBERON:0000042,3.07e-08,12;UBERON:0009569,4.85e-07,112|phase1_expression=1.2717486548939,0.428201047781966,0.845726424575827,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00535164254356,0.724232594804119,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,1.35021065793013,0.292311015483596,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,1.24053903909388,1.53461973288062,0.561320188866147,0.512556597022804,0.511707249066704,0.482561763430822,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,1.26664581178598,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,1.02418136999391,0.906574442192831,1.28066733322951,0.688992370603241,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0.472834243795189,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0.318593534327405,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0.686791410365586,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.398594520940089,0,0,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p18@ARSB}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=714 | |||
|TSSclassifier=S | |||
|UniProt=E5RHC4 | |||
|association_with_transcript=-31bp_to_ENST00000521117_5end | |||
|description=CAGE_peak_18_at_ARSB_5end | |||
|id=chr5:78281692..78281703,- | |||
|ontology_enrichment_celltype=CL:0002580!7.69e-07!3;CL:0002334!9.67e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002580;3.59e-30;3!CL:0002617;2.45e-12;2!CL:0000153;7.39e-11;9!CL:0000447;7.39e-11;9!CL:0002615;1.17e-08;3!CL:0000214;1.17e-08;3!CL:0000182;2.65e-08;12!CL:0002334;2.65e-08;12!CL:0000136;9.84e-08;13!CL:0000327;7.09e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.67e-30,3;CL:0002617,2.32e-12,2;CL:0000153,7.58e-11,9;CL:0000447,7.58e-11,9;CL:0000214,1.21e-08,3;CL:0002615,1.51e-08,3;CL:0002334,2.46e-08,12;CL:0000182,2.75e-08,12;CL:0000327,7.20e-07,15;CL:0000136,8.83e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.63e-09;11!UBERON:0009497;9.84e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!4.19e-08!6;UBERON:0002358!4.19e-08!6;UBERON:0003684!4.19e-08!6;UBERON:0001178!4.19e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.98e-20;10!UBERON:0001443;1.21e-18;11!UBERON:0004457;9.23e-11;9!UBERON:0000042;9.23e-11;9!UBERON:0006915;1.17e-08;3!UBERON:0007616;1.17e-08;3!UBERON:0002217;1.17e-08;3!UBERON:0002018;1.17e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.67e-20,10;UBERON:0001443,1.04e-18,11;UBERON:0006915,1.21e-08,3;UBERON:0007616,1.21e-08,3;UBERON:0002217,1.21e-08,3;UBERON:0002018,1.21e-08,3;UBERON:0004457,3.07e-08,12;UBERON:0000042,3.07e-08,12;UBERON:0009569,4.85e-07,112 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.845726424575827,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00535164254356,0.724232594804119,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.397227542439656,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,1.35021065793013,0.292311015483596,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,1.24053903909388,1.53461973288062,0.561320188866147,0.512556597022804,0.511707249066704,0.482561763430822,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,1.26664581178598,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,1.02418136999391,0.906574442192831,1.28066733322951,0.688992370603241,0,0,0,0,0,0,0.674921674654501,0.77380195455795,0,0,0.472834243795189,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0.318593534327405,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,0,0.686791410365586,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.398594520940089,0,0,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p18@ARSB | |||
}} |
Revision as of 16:34, 13 September 2013
Short description: | p18@ARSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_ARSB_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000521117_5end |
EntrezGene: | ARSB |
HGNC: | 714 |
UniProt: | E5RHC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.67e-30 | 3 |
adipocyte of breast | 2.32e-12 | 2 |
GAG secreting cell | 7.58e-11 | 9 |
carbohydrate secreting cell | 7.58e-11 | 9 |
synovial cell | 1.21e-08 | 3 |
adipocyte of omentum tissue | 1.51e-08 | 3 |
preadipocyte | 2.46e-08 | 12 |
hepatocyte | 2.75e-08 | 12 |
extracellular matrix secreting cell | 7.20e-07 | 15 |
fat cell | 8.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
breast | 1.67e-20 | 10 |
chest | 1.04e-18 | 11 |
stratified squamous epithelium | 1.21e-08 | 3 |
layer of synovial tissue | 1.21e-08 | 3 |
synovial joint | 1.21e-08 | 3 |
synovial membrane of synovial joint | 1.21e-08 | 3 |
cavity lining | 3.07e-08 | 12 |
serous membrane | 3.07e-08 | 12 |
subdivision of trunk | 4.85e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.