FFCP PHASE1:Mm9::chr18:62483890..62483902,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15562|HGNC=|MCL_coexpression_id=2942|UniProt=P97288|association_with_transcript=32bp_to_ENSMUST00000027560,NM_008313,uc008fda.1_5end|description=CAGE_peak_3_at_Htr4_5end|id=chr18:62483890..62483902,+|ontology_enrichment_celltype=CL:0000117!3.93e-11!23;CL:0000337!3.93e-11!23;CL:0002610!5.47e-08!3;CL:0002614!3.46e-07!3;CL:0002612!4.40e-07!3;CL:0000540!5.95e-07!33;CL:0000047!5.95e-07!33;CL:0000031!5.95e-07!33;CL:0000404!5.95e-07!33|ontology_enrichment_celltype_v019_2=CL:0002610,7.68e-33,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.06e-18!52;UBERON:0005068!1.06e-18!52;UBERON:0006241!1.06e-18!52;UBERON:0007135!1.06e-18!52;UBERON:0000955!5.92e-18!50;UBERON:0006238!5.92e-18!50;UBERON:0001017!2.49e-17!73;UBERON:0005743!2.49e-17!73;UBERON:0002616!1.10e-16!49;UBERON:0000073!1.11e-16!75;UBERON:0001016!1.11e-16!75;UBERON:0002020!1.86e-14!34;UBERON:0000033!4.84e-13!63;UBERON:0002298!6.39e-13!6;UBERON:0002346!4.49e-12!71;UBERON:0003075!4.49e-12!71;UBERON:0007284!4.49e-12!71;UBERON:0003080!8.53e-12!40;UBERON:0002780!1.51e-10!39;UBERON:0001890!1.51e-10!39;UBERON:0006240!1.51e-10!39;UBERON:0004121!1.98e-10!102;UBERON:0000924!1.98e-10!102;UBERON:0006601!1.98e-10!102;UBERON:0002791!1.03e-09!29;UBERON:0003528!1.03e-09!29;UBERON:0001893!1.03e-09!29;UBERON:0002240!2.84e-09!6;UBERON:0005174!2.84e-09!6;UBERON:0001137!2.84e-09!6;UBERON:0002950!3.02e-09!4;UBERON:0001891!3.02e-09!4;UBERON:0009616!3.02e-09!4;UBERON:0002420!3.59e-09!8;UBERON:0007245!3.59e-09!8;UBERON:0010009!3.59e-09!8;UBERON:0010011!3.59e-09!8;UBERON:0000454!3.59e-09!8;UBERON:0003056!7.12e-09!49;UBERON:0003076!3.34e-08!12;UBERON:0003057!3.34e-08!12;UBERON:0007811!4.79e-08!86;UBERON:0004684!5.47e-08!3;UBERON:0002275!5.47e-08!3;UBERON:0001948!2.80e-07!5;UBERON:0002315!2.80e-07!5;UBERON:0002038!3.46e-07!3;UBERON:0002308!3.46e-07!3;UBERON:0009663!3.46e-07!3;UBERON:0009661!3.46e-07!3;UBERON:0006331!3.46e-07!3;UBERON:0000125!3.46e-07!3;UBERON:0002257!4.40e-07!3;UBERON:0000153!6.69e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0004684,7.68e-33,3;UBERON:0002275,7.68e-33,3;UBERON:0000073,5.73e-10,54;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.22885226604995,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,0.854230084794618,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,2.28750301409313,0.376963056338593,0.695297280769106,0.767146371990992,1.24672826735736,1.46017136760982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p3@Htr4}} | ||
|EntrezGene=15562 | |||
|HGNC= | |||
|MCL_coexpression_id=2942 | |||
|UniProt=P97288 | |||
|association_with_transcript=32bp_to_ENSMUST00000027560,NM_008313,uc008fda.1_5end | |||
|description=CAGE_peak_3_at_Htr4_5end | |||
|id=chr18:62483890..62483902,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.93e-11!23;CL:0000337!3.93e-11!23;CL:0002610!5.47e-08!3;CL:0002614!3.46e-07!3;CL:0002612!4.40e-07!3;CL:0000540!5.95e-07!33;CL:0000047!5.95e-07!33;CL:0000031!5.95e-07!33;CL:0000404!5.95e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.68e-33,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-18!52;UBERON:0005068!1.06e-18!52;UBERON:0006241!1.06e-18!52;UBERON:0007135!1.06e-18!52;UBERON:0000955!5.92e-18!50;UBERON:0006238!5.92e-18!50;UBERON:0001017!2.49e-17!73;UBERON:0005743!2.49e-17!73;UBERON:0002616!1.10e-16!49;UBERON:0000073!1.11e-16!75;UBERON:0001016!1.11e-16!75;UBERON:0002020!1.86e-14!34;UBERON:0000033!4.84e-13!63;UBERON:0002298!6.39e-13!6;UBERON:0002346!4.49e-12!71;UBERON:0003075!4.49e-12!71;UBERON:0007284!4.49e-12!71;UBERON:0003080!8.53e-12!40;UBERON:0002780!1.51e-10!39;UBERON:0001890!1.51e-10!39;UBERON:0006240!1.51e-10!39;UBERON:0004121!1.98e-10!102;UBERON:0000924!1.98e-10!102;UBERON:0006601!1.98e-10!102;UBERON:0002791!1.03e-09!29;UBERON:0003528!1.03e-09!29;UBERON:0001893!1.03e-09!29;UBERON:0002240!2.84e-09!6;UBERON:0005174!2.84e-09!6;UBERON:0001137!2.84e-09!6;UBERON:0002950!3.02e-09!4;UBERON:0001891!3.02e-09!4;UBERON:0009616!3.02e-09!4;UBERON:0002420!3.59e-09!8;UBERON:0007245!3.59e-09!8;UBERON:0010009!3.59e-09!8;UBERON:0010011!3.59e-09!8;UBERON:0000454!3.59e-09!8;UBERON:0003056!7.12e-09!49;UBERON:0003076!3.34e-08!12;UBERON:0003057!3.34e-08!12;UBERON:0007811!4.79e-08!86;UBERON:0004684!5.47e-08!3;UBERON:0002275!5.47e-08!3;UBERON:0001948!2.80e-07!5;UBERON:0002315!2.80e-07!5;UBERON:0002038!3.46e-07!3;UBERON:0002308!3.46e-07!3;UBERON:0009663!3.46e-07!3;UBERON:0009661!3.46e-07!3;UBERON:0006331!3.46e-07!3;UBERON:0000125!3.46e-07!3;UBERON:0002257!4.40e-07!3;UBERON:0000153!6.69e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,7.68e-33,3;UBERON:0002275,7.68e-33,3;UBERON:0000073,5.73e-10,54;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.883474163806454,0,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.22885226604995,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.61119299110724,0.589257170947335,0.854230084794618,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,2.28750301409313,0.376963056338593,0.695297280769106,0.767146371990992,1.24672826735736,1.46017136760982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41608891984667,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Htr4 | |||
}} |
Revision as of 16:31, 13 September 2013
Short description: | p3@Htr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Htr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2942 |
Association with transcript: | 32bp_to_ENSMUST00000027560, NM_008313, uc008fda.1_5end |
EntrezGene: | Htr4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.68e-33 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 7.68e-33 | 3 |
reticular formation | 7.68e-33 | 3 |
regional part of nervous system | 5.73e-10 | 54 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.