FFCP PHASE1:Hg19::chr5:75699195..75699206,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10788|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6111|TSSclassifier=S|UniProt=F5H7S7,Q13576,Q59HA3|association_with_transcript=46bp_to_ENST00000379730,NM_006633,uc003kek.2_5end|coexpression_cluster_id=C1964|description=CAGE_peak_6_at_IQGAP2_5end|id=chr5:75699195..75699206,+|ontology_enrichment_celltype=CL:0000037!9.60e-39!172;CL:0000566!9.60e-39!172;CL:0000738!2.78e-37!140;CL:0002032!8.65e-37!165;CL:0000837!8.65e-37!165;CL:0000988!1.41e-36!182;CL:0002031!1.02e-34!124;CL:0002087!1.14e-33!119;CL:0000766!1.43e-32!76;CL:0000557!6.30e-32!71;CL:0000839!5.31e-31!70;CL:0002057!1.99e-30!42;CL:0000763!7.97e-30!112;CL:0000049!7.97e-30!112;CL:0002194!1.03e-27!63;CL:0000576!1.03e-27!63;CL:0000040!1.03e-27!63;CL:0000559!1.03e-27!63;CL:0002009!3.28e-27!65;CL:0000860!3.47e-27!45;CL:0000791!1.50e-10!18;CL:0000789!1.50e-10!18;CL:0002420!1.50e-10!18;CL:0002419!1.50e-10!18;CL:0000790!1.50e-10!18;CL:0000084!1.52e-08!25;CL:0000827!1.52e-08!25;CL:0000625!3.97e-08!11;CL:0002393!1.86e-07!9;CL:0002397!1.86e-07!9;CL:0000542!5.04e-07!53;CL:0000051!5.04e-07!53;CL:0000838!9.46e-07!52|ontology_enrichment_celltype_v019=CL:0000860;1.35e-31;33!CL:0002057;1.35e-31;33!CL:0000473;1.86e-30;39!CL:0000234;1.86e-30;39!CL:0000576;1.49e-24;48!CL:0000766;9.20e-22;69!CL:0000763;7.01e-12;100!CL:0002087;1.69e-11;104!CL:0000097;6.46e-10;5!CL:0000235;2.55e-08;6!CL:0002619;1.03e-07;3!CL:0000738;1.13e-07;136!CL:0000623;5.13e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,2.17e-46,72;CL:0000557,2.71e-46,67;CL:0000839,1.67e-44,66;CL:0000473,4.94e-42,48;CL:0000234,4.94e-42,48;CL:0002194,9.94e-39,59;CL:0000576,9.94e-39,59;CL:0000040,9.94e-39,59;CL:0000559,9.94e-39,59;CL:0002009,4.20e-37,61;CL:0002031,6.38e-37,120;CL:0000738,1.58e-36,136;CL:0000860,4.09e-35,42;CL:0002057,4.09e-35,42;CL:0000037,6.34e-33,168;CL:0000763,8.54e-33,108;CL:0000049,8.54e-33,108;CL:0002032,1.79e-32,161;CL:0000837,1.79e-32,161;CL:0002087,2.01e-32,115;CL:0000988,2.33e-30,177;CL:0000097,6.65e-10,5;CL:0002028,6.65e-10,5;CL:0000134,2.80e-09,354;CL:0002320,8.64e-09,361;CL:0000235,2.35e-08,6;CL:0002619,9.46e-08,3;CL:0000219,4.24e-07,386;CL:0000623,5.16e-07,3;CL:0000825,5.16e-07,3|ontology_enrichment_development_v019=CL:0002057;1.71e-26;42!CL:0000049;1.40e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.63e-34!102;UBERON:0003061!5.63e-34!102;UBERON:0002193!8.91e-30!112;UBERON:0002371!3.12e-28!80;UBERON:0002405!1.24e-25!115;UBERON:0001474!1.41e-24!86;UBERON:0004765!1.59e-17!101;UBERON:0001434!1.59e-17!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-43,76;UBERON:0001474,3.30e-39,82;UBERON:0002390,2.21e-35,98;UBERON:0003061,2.21e-35,98;UBERON:0004765,1.49e-34,90;UBERON:0002405,5.15e-33,93;UBERON:0002193,7.98e-31,108;UBERON:0001434,8.69e-30,100;UBERON:0002204,1.04e-13,167;UBERON:0003081,9.47e-12,203;UBERON:0002384,3.96e-08,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,1.57345710739562,1.91914699048606,2.01260960310899,0,0,0,0,0,1.76160263600908,3.87796785972314,3.40925560699241,6.2933152507597,5.59788685599811,6.80176698639857,5.92423805558629,1.16318591023652,1.51150377475524,2.18325655069035,2.32429036905685,5.34518254428373,2.16794459626573,1.43846196161075,1.7931249457037,1.89185783910868,2.41321976515633,8.39130088658974,4.06279459783025,0,3.547779950752,2.69668181334102,3.36692281607993,6.73950956859797,8.95071976118658,0.329851300186716,1.59570926097305,0.852449501065388,6.67481248845743,10.7803192691317,11.8336227309159,0.502497330513487,1.0429658368404,0.868755378820466,4.84319602106695,7.73383035573886,6.32924774881769,0.633765858935825,0.637812899895131,2.30624510059213,0.44931452458598,0.750884464207532,0.48217676009124,0.855038231223746,0.59675003159727,0.91332076882317,0,0,0,0,0,0.574752439954483,0,0,0,0,1.14681968437569,2.64342657158052,1.68152568894461,0.263384084775077,0.786839080455332,1.57204305099666,2.05601498999509,0.334372990781356,0.32592226663359,0.473447805734733,0,0.779873198196215,0.883817722424512,1.77227115666897,0.812411591295047,0.896639238079726,1.30059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,0.906474741580529,0,1.71813722741315,0.253019692019503,0.318565414324097,0.651083453856419,1.90090408889675,1.05402583354441,0.895906278080929,1.24930726552346,0.710331756132051,0.821127996921047,2.01606743224732,1.87208137048455,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0.132957960518865,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.20732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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10788 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6111 | |||
|TSSclassifier=S | |||
|UniProt=F5H7S7,Q13576,Q59HA3 | |||
|association_with_transcript=46bp_to_ENST00000379730,NM_006633,uc003kek.2_5end | |||
|coexpression_cluster_id=C1964 | |||
|description=CAGE_peak_6_at_IQGAP2_5end | |||
|id=chr5:75699195..75699206,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.60e-39!172;CL:0000566!9.60e-39!172;CL:0000738!2.78e-37!140;CL:0002032!8.65e-37!165;CL:0000837!8.65e-37!165;CL:0000988!1.41e-36!182;CL:0002031!1.02e-34!124;CL:0002087!1.14e-33!119;CL:0000766!1.43e-32!76;CL:0000557!6.30e-32!71;CL:0000839!5.31e-31!70;CL:0002057!1.99e-30!42;CL:0000763!7.97e-30!112;CL:0000049!7.97e-30!112;CL:0002194!1.03e-27!63;CL:0000576!1.03e-27!63;CL:0000040!1.03e-27!63;CL:0000559!1.03e-27!63;CL:0002009!3.28e-27!65;CL:0000860!3.47e-27!45;CL:0000791!1.50e-10!18;CL:0000789!1.50e-10!18;CL:0002420!1.50e-10!18;CL:0002419!1.50e-10!18;CL:0000790!1.50e-10!18;CL:0000084!1.52e-08!25;CL:0000827!1.52e-08!25;CL:0000625!3.97e-08!11;CL:0002393!1.86e-07!9;CL:0002397!1.86e-07!9;CL:0000542!5.04e-07!53;CL:0000051!5.04e-07!53;CL:0000838!9.46e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-31;33!CL:0002057;1.35e-31;33!CL:0000473;1.86e-30;39!CL:0000234;1.86e-30;39!CL:0000576;1.49e-24;48!CL:0000766;9.20e-22;69!CL:0000763;7.01e-12;100!CL:0002087;1.69e-11;104!CL:0000097;6.46e-10;5!CL:0000235;2.55e-08;6!CL:0002619;1.03e-07;3!CL:0000738;1.13e-07;136!CL:0000623;5.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.17e-46,72;CL:0000557,2.71e-46,67;CL:0000839,1.67e-44,66;CL:0000473,4.94e-42,48;CL:0000234,4.94e-42,48;CL:0002194,9.94e-39,59;CL:0000576,9.94e-39,59;CL:0000040,9.94e-39,59;CL:0000559,9.94e-39,59;CL:0002009,4.20e-37,61;CL:0002031,6.38e-37,120;CL:0000738,1.58e-36,136;CL:0000860,4.09e-35,42;CL:0002057,4.09e-35,42;CL:0000037,6.34e-33,168;CL:0000763,8.54e-33,108;CL:0000049,8.54e-33,108;CL:0002032,1.79e-32,161;CL:0000837,1.79e-32,161;CL:0002087,2.01e-32,115;CL:0000988,2.33e-30,177;CL:0000097,6.65e-10,5;CL:0002028,6.65e-10,5;CL:0000134,2.80e-09,354;CL:0002320,8.64e-09,361;CL:0000235,2.35e-08,6;CL:0002619,9.46e-08,3;CL:0000219,4.24e-07,386;CL:0000623,5.16e-07,3;CL:0000825,5.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-26;42!CL:0000049;1.40e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.63e-34!102;UBERON:0003061!5.63e-34!102;UBERON:0002193!8.91e-30!112;UBERON:0002371!3.12e-28!80;UBERON:0002405!1.24e-25!115;UBERON:0001474!1.41e-24!86;UBERON:0004765!1.59e-17!101;UBERON:0001434!1.59e-17!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-43,76;UBERON:0001474,3.30e-39,82;UBERON:0002390,2.21e-35,98;UBERON:0003061,2.21e-35,98;UBERON:0004765,1.49e-34,90;UBERON:0002405,5.15e-33,93;UBERON:0002193,7.98e-31,108;UBERON:0001434,8.69e-30,100;UBERON:0002204,1.04e-13,167;UBERON:0003081,9.47e-12,203;UBERON:0002384,3.96e-08,371 | |||
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| |||
|short_description=p6@IQGAP2 | |||
}} |
Revision as of 16:26, 13 September 2013
Short description: | p6@IQGAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_IQGAP2_5end |
Coexpression cluster: | C1964_Mast_Hepatocyte_CD14_granulocyte_liver_Macrophage_acute |
Association with transcript: | 46bp_to_ENST00000379730, NM_006633, uc003kek.2_5end |
EntrezGene: | IQGAP2 |
HGNC: | 6111 |
UniProt: | F5H7S7Q13576Q59HA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.17e-46 | 72 |
granulocyte monocyte progenitor cell | 2.71e-46 | 67 |
myeloid lineage restricted progenitor cell | 1.67e-44 | 66 |
defensive cell | 4.94e-42 | 48 |
phagocyte | 4.94e-42 | 48 |
monopoietic cell | 9.94e-39 | 59 |
monocyte | 9.94e-39 | 59 |
monoblast | 9.94e-39 | 59 |
promonocyte | 9.94e-39 | 59 |
macrophage dendritic cell progenitor | 4.20e-37 | 61 |
hematopoietic lineage restricted progenitor cell | 6.38e-37 | 120 |
leukocyte | 1.58e-36 | 136 |
classical monocyte | 4.09e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.09e-35 | 42 |
hematopoietic stem cell | 6.34e-33 | 168 |
myeloid cell | 8.54e-33 | 108 |
common myeloid progenitor | 8.54e-33 | 108 |
hematopoietic oligopotent progenitor cell | 1.79e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-32 | 161 |
nongranular leukocyte | 2.01e-32 | 115 |
hematopoietic cell | 2.33e-30 | 177 |
mast cell | 6.65e-10 | 5 |
basophil mast progenitor cell | 6.65e-10 | 5 |
mesenchymal cell | 2.80e-09 | 354 |
connective tissue cell | 8.64e-09 | 361 |
macrophage | 2.35e-08 | 6 |
adult endothelial progenitor cell | 9.46e-08 | 3 |
motile cell | 4.24e-07 | 386 |
natural killer cell | 5.16e-07 | 3 |
pro-NK cell | 5.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-43 | 76 |
bone element | 3.30e-39 | 82 |
hematopoietic system | 2.21e-35 | 98 |
blood island | 2.21e-35 | 98 |
skeletal element | 1.49e-34 | 90 |
immune system | 5.15e-33 | 93 |
hemolymphoid system | 7.98e-31 | 108 |
skeletal system | 8.69e-30 | 100 |
musculoskeletal system | 1.04e-13 | 167 |
lateral plate mesoderm | 9.47e-12 | 203 |
connective tissue | 3.96e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.