FFCP PHASE1:Hg19::chr5:55149186..55149200,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=133396|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18969|TSSclassifier=S|UniProt=Q8NI17,B4DNJ2|association_with_transcript=36bp_to_ENST00000297015,NM_001242636,NM_001242639,uc003jqo.2,uc010iwa.1_5end|coexpression_cluster_id=C7|description=CAGE_peak_6_at_IL31RA_5end|id=chr5:55149186..55149200,+|ontology_enrichment_celltype=CL:0002057!5.01e-114!42;CL:0000860!7.57e-106!45;CL:0002194!3.23e-80!63;CL:0000576!3.23e-80!63;CL:0000040!3.23e-80!63;CL:0000559!3.23e-80!63;CL:0002009!1.63e-77!65;CL:0000766!1.07e-76!76;CL:0000839!2.01e-71!70;CL:0000557!2.63e-70!71;CL:0000763!6.85e-52!112;CL:0000049!6.85e-52!112;CL:0002087!2.35e-48!119;CL:0000738!1.30e-46!140;CL:0002031!4.83e-39!124;CL:0000037!4.83e-38!172;CL:0000566!4.83e-38!172;CL:0000988!2.03e-35!182;CL:0002032!3.01e-34!165;CL:0000837!3.01e-34!165;CL:0000134!5.05e-14!358;CL:0002320!1.47e-13!365;CL:0000767!5.33e-12!3;CL:0000219!6.32e-12!390;CL:0000842!1.78e-11!3;CL:0000048!5.69e-10!430;CL:0000723!1.08e-09!436;CL:0000034!2.46e-09!444;CL:0000224!1.00e-08!4;CL:0002393!2.94e-07!9;CL:0002397!2.94e-07!9|ontology_enrichment_celltype_v019=CL:0000860;1.86e-80;33!CL:0002057;1.86e-80;33!CL:0000473;4.15e-57;39!CL:0000234;4.15e-57;39!CL:0000576;1.94e-52;48!CL:0000766;3.55e-27;69!CL:0000763;5.36e-18;100!CL:0002087;3.55e-14;104!CL:0002393;8.15e-13;6!CL:0002397;8.15e-13;6!CL:0000738;7.80e-10;136|ontology_enrichment_celltype_v019_2=CL:0000860,2.01e-92,42;CL:0002057,2.01e-92,42;CL:0000473,1.76e-80,48;CL:0000234,1.76e-80,48;CL:0002194,9.43e-64,59;CL:0000576,9.43e-64,59;CL:0000040,9.43e-64,59;CL:0000559,9.43e-64,59;CL:0002009,1.36e-61,61;CL:0000766,8.92e-57,72;CL:0000839,9.33e-57,66;CL:0000557,7.11e-56,67;CL:0000763,6.21e-37,108;CL:0000049,6.21e-37,108;CL:0002087,1.32e-34,115;CL:0002031,4.91e-33,120;CL:0000738,1.50e-31,136;CL:0002032,3.76e-26,161;CL:0000837,3.76e-26,161;CL:0000037,6.33e-25,168;CL:0000988,1.73e-23,177;CL:0000134,5.77e-10,354;CL:0002320,1.06e-09,361;CL:0002393,7.65e-09,9;CL:0002397,7.65e-09,9;CL:0000219,9.21e-09,386;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441|ontology_enrichment_development_v019=CL:0002057;1.59e-68;42!CL:0000049;3.93e-12;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.83e-64!102;UBERON:0003061!6.83e-64!102;UBERON:0002371!1.70e-61!80;UBERON:0002193!2.22e-57!112;UBERON:0001474!1.24e-56!86;UBERON:0004765!5.58e-47!101;UBERON:0001434!5.58e-47!101;UBERON:0002405!3.19e-40!115;UBERON:0003081!4.07e-28!216;UBERON:0002204!5.48e-25!167;UBERON:0002384!6.30e-13!375;UBERON:0000926!4.61e-09!448;UBERON:0004120!4.61e-09!448;UBERON:0006603!4.61e-09!448;UBERON:0000178!3.07e-08!15;UBERON:0000179!3.07e-08!15;UBERON:0000463!3.07e-08!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.77e-49,76;UBERON:0001474,3.44e-45,82;UBERON:0004765,6.27e-41,90;UBERON:0002405,1.62e-39,93;UBERON:0002390,2.36e-37,98;UBERON:0003061,2.36e-37,98;UBERON:0001434,1.51e-36,100;UBERON:0002193,1.27e-33,108;UBERON:0002204,1.29e-20,167;UBERON:0003081,2.32e-16,203;UBERON:0002384,2.45e-09,371;UBERON:0000926,2.82e-09,315;UBERON:0004120,2.82e-09,315;UBERON:0006603,2.82e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.309632246632152,0,0,0,0,0,0,1.66198622559563,1.60435557976113,1.73608696572681,0,0,0.257575567634187,1.59938062657521,0.755751887377619,1.21292030593908,2.09186133215116,0.411167888021826,0.929119112685311,11.2200033005639,12.0395532068677,10.6417003449863,2.41321976515633,0.645484683583826,0,1.69418105588344,0.818718450173537,0.449446968890169,1.22433556948361,1.60464513538047,1.27867425159808,5.60747210317417,9.97318288108159,8.09827026012119,1.45104619314292,0.56738522469114,0.622822248995575,11.5574386018102,14.0800387973454,8.03598725408932,1.21079900526674,0.368277635987565,0.632924774881769,0,0.637812899895131,0,0.112328631146495,0.300353785683013,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,4.77931235257603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@IL31RA}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=133396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18969 | |||
|TSSclassifier=S | |||
|UniProt=Q8NI17,B4DNJ2 | |||
|association_with_transcript=36bp_to_ENST00000297015,NM_001242636,NM_001242639,uc003jqo.2,uc010iwa.1_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_6_at_IL31RA_5end | |||
|id=chr5:55149186..55149200,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.01e-114!42;CL:0000860!7.57e-106!45;CL:0002194!3.23e-80!63;CL:0000576!3.23e-80!63;CL:0000040!3.23e-80!63;CL:0000559!3.23e-80!63;CL:0002009!1.63e-77!65;CL:0000766!1.07e-76!76;CL:0000839!2.01e-71!70;CL:0000557!2.63e-70!71;CL:0000763!6.85e-52!112;CL:0000049!6.85e-52!112;CL:0002087!2.35e-48!119;CL:0000738!1.30e-46!140;CL:0002031!4.83e-39!124;CL:0000037!4.83e-38!172;CL:0000566!4.83e-38!172;CL:0000988!2.03e-35!182;CL:0002032!3.01e-34!165;CL:0000837!3.01e-34!165;CL:0000134!5.05e-14!358;CL:0002320!1.47e-13!365;CL:0000767!5.33e-12!3;CL:0000219!6.32e-12!390;CL:0000842!1.78e-11!3;CL:0000048!5.69e-10!430;CL:0000723!1.08e-09!436;CL:0000034!2.46e-09!444;CL:0000224!1.00e-08!4;CL:0002393!2.94e-07!9;CL:0002397!2.94e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.86e-80;33!CL:0002057;1.86e-80;33!CL:0000473;4.15e-57;39!CL:0000234;4.15e-57;39!CL:0000576;1.94e-52;48!CL:0000766;3.55e-27;69!CL:0000763;5.36e-18;100!CL:0002087;3.55e-14;104!CL:0002393;8.15e-13;6!CL:0002397;8.15e-13;6!CL:0000738;7.80e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.01e-92,42;CL:0002057,2.01e-92,42;CL:0000473,1.76e-80,48;CL:0000234,1.76e-80,48;CL:0002194,9.43e-64,59;CL:0000576,9.43e-64,59;CL:0000040,9.43e-64,59;CL:0000559,9.43e-64,59;CL:0002009,1.36e-61,61;CL:0000766,8.92e-57,72;CL:0000839,9.33e-57,66;CL:0000557,7.11e-56,67;CL:0000763,6.21e-37,108;CL:0000049,6.21e-37,108;CL:0002087,1.32e-34,115;CL:0002031,4.91e-33,120;CL:0000738,1.50e-31,136;CL:0002032,3.76e-26,161;CL:0000837,3.76e-26,161;CL:0000037,6.33e-25,168;CL:0000988,1.73e-23,177;CL:0000134,5.77e-10,354;CL:0002320,1.06e-09,361;CL:0002393,7.65e-09,9;CL:0002397,7.65e-09,9;CL:0000219,9.21e-09,386;CL:0000048,1.30e-07,427;CL:0000723,1.87e-07,433;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-68;42!CL:0000049;3.93e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.83e-64!102;UBERON:0003061!6.83e-64!102;UBERON:0002371!1.70e-61!80;UBERON:0002193!2.22e-57!112;UBERON:0001474!1.24e-56!86;UBERON:0004765!5.58e-47!101;UBERON:0001434!5.58e-47!101;UBERON:0002405!3.19e-40!115;UBERON:0003081!4.07e-28!216;UBERON:0002204!5.48e-25!167;UBERON:0002384!6.30e-13!375;UBERON:0000926!4.61e-09!448;UBERON:0004120!4.61e-09!448;UBERON:0006603!4.61e-09!448;UBERON:0000178!3.07e-08!15;UBERON:0000179!3.07e-08!15;UBERON:0000463!3.07e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.77e-49,76;UBERON:0001474,3.44e-45,82;UBERON:0004765,6.27e-41,90;UBERON:0002405,1.62e-39,93;UBERON:0002390,2.36e-37,98;UBERON:0003061,2.36e-37,98;UBERON:0001434,1.51e-36,100;UBERON:0002193,1.27e-33,108;UBERON:0002204,1.29e-20,167;UBERON:0003081,2.32e-16,203;UBERON:0002384,2.45e-09,371;UBERON:0000926,2.82e-09,315;UBERON:0004120,2.82e-09,315;UBERON:0006603,2.82e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.309632246632152,0,0,0,0,0,0,1.66198622559563,1.60435557976113,1.73608696572681,0,0,0.257575567634187,1.59938062657521,0.755751887377619,1.21292030593908,2.09186133215116,0.411167888021826,0.929119112685311,11.2200033005639,12.0395532068677,10.6417003449863,2.41321976515633,0.645484683583826,0,1.69418105588344,0.818718450173537,0.449446968890169,1.22433556948361,1.60464513538047,1.27867425159808,5.60747210317417,9.97318288108159,8.09827026012119,1.45104619314292,0.56738522469114,0.622822248995575,11.5574386018102,14.0800387973454,8.03598725408932,1.21079900526674,0.368277635987565,0.632924774881769,0,0.637812899895131,0,0.112328631146495,0.300353785683013,0.803627933485401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,4.77931235257603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@IL31RA | |||
}} |
Revision as of 15:54, 13 September 2013
Short description: | p6@IL31RA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_IL31RA_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 36bp_to_ENST00000297015, NM_001242636, NM_001242639, uc003jqo.2, uc010iwa.1_5end |
EntrezGene: | IL31RA |
HGNC: | 18969 |
UniProt: | Q8NI17B4DNJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.01e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-92 | 42 |
defensive cell | 1.76e-80 | 48 |
phagocyte | 1.76e-80 | 48 |
monopoietic cell | 9.43e-64 | 59 |
monocyte | 9.43e-64 | 59 |
monoblast | 9.43e-64 | 59 |
promonocyte | 9.43e-64 | 59 |
macrophage dendritic cell progenitor | 1.36e-61 | 61 |
myeloid leukocyte | 8.92e-57 | 72 |
myeloid lineage restricted progenitor cell | 9.33e-57 | 66 |
granulocyte monocyte progenitor cell | 7.11e-56 | 67 |
myeloid cell | 6.21e-37 | 108 |
common myeloid progenitor | 6.21e-37 | 108 |
nongranular leukocyte | 1.32e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 4.91e-33 | 120 |
leukocyte | 1.50e-31 | 136 |
hematopoietic oligopotent progenitor cell | 3.76e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.76e-26 | 161 |
hematopoietic stem cell | 6.33e-25 | 168 |
hematopoietic cell | 1.73e-23 | 177 |
mesenchymal cell | 5.77e-10 | 354 |
connective tissue cell | 1.06e-09 | 361 |
intermediate monocyte | 7.65e-09 | 9 |
CD14-positive, CD16-positive monocyte | 7.65e-09 | 9 |
motile cell | 9.21e-09 | 386 |
multi fate stem cell | 1.30e-07 | 427 |
somatic stem cell | 1.87e-07 | 433 |
stem cell | 3.01e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.77e-49 | 76 |
bone element | 3.44e-45 | 82 |
skeletal element | 6.27e-41 | 90 |
immune system | 1.62e-39 | 93 |
hematopoietic system | 2.36e-37 | 98 |
blood island | 2.36e-37 | 98 |
skeletal system | 1.51e-36 | 100 |
hemolymphoid system | 1.27e-33 | 108 |
musculoskeletal system | 1.29e-20 | 167 |
lateral plate mesoderm | 2.32e-16 | 203 |
connective tissue | 2.45e-09 | 371 |
mesoderm | 2.82e-09 | 315 |
mesoderm-derived structure | 2.82e-09 | 315 |
presumptive mesoderm | 2.82e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.