FFCP PHASE1:Mm9::chr18:32091107..32091114,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=225341|HGNC=|UniProt=Q91XD2|association_with_transcript=-46bp_to_ENSMUST00000025254,NM_144862,uc008eiv.1_5end|description=CAGE_peak_3_at_Lims2_5end|id=chr18:32091107..32091114,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000217,3.91e-09,2;CL:0000328,3.91e-09,2;CL:0002573,3.91e-09,2;CL:0002376,3.91e-09,2;CL:0000218,3.91e-09,2;CL:0000692,3.91e-09,2;CL:0002377,3.91e-09,2;CL:0002375,3.91e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.55e-07!25;UBERON:0002330!2.55e-07!25;UBERON:0003914!4.81e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.54e-07,25;UBERON:0002330,2.54e-07,25;UBERON:0005631,9.18e-07,3;UBERON:0000478,9.18e-07,3;UBERON:0000158,9.18e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,1.56478268869608,0.218025156380447,1.09843091367236,0.58328969722285,0.839918529752175,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,1.12552522006336,0.30559649555362,0,0,0,1.06016670666458,2.64500460373749,0.579728977403356,0.860423876981386,3.39985666853875,1.61910957491345,0,0.896053774194671,0.561777680527007,0.852151612890289,0.259786004602869,1.06001872353102,0,1.28326477414318,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,2.71914464507811,1.3013942122792,0,0,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0.811206315338788,0,0.124406970610093,0.252722758433675,0,0,0,0.180062129805349,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.467061369468678,0.329119699826961,0.164167464079095,0.162137619091711,0.730999937126662,0.219550115291051,0.939444931322602,0,0.102904612379284,0,0,0,0,0,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0,0,0.203651327845314,0,0.350679099451593,0.126473074248515,0.295220295959204,0,0.493588655687202,1.1858105083486,0,0,0,0,0.241177159752417,0.25462585178142,0.863088412352432,0.810676133875177,0.274561413188081,0,0.372140947668503,1.5601883655728,0.757736633841335,1.25578189465339,1.4473305640901,2.03228509183265,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.975668239288994,0.472905432318573,0.664394068946325,0.478364305972461,2.45794972073607,0.690739927463582,1.15719246865209,0,0,0.491764273019036,0.275936746304732,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0.445597348164788,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.567760340833074,0,0,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,1.90648863777438,0.220528398054962,0.49465875882444,0,0.482503399425247,0,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.777689839750757,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0.335769232728157,0.965947970160952,1.50145980360946,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0,0,0,0.25347929989024,0.565879024158229,0,0,0.34461281373368,0,0.579421629724277,0.192909220463705,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0.818462086339379,0,0.385813221962283,0.249810577937946,0,0.644613162144895,0.956441660344217,0.220591419119515,0.463735671240843|short_description=p3@Lims2}} | ||
|EntrezGene=225341 | |||
|HGNC= | |||
|UniProt=Q91XD2 | |||
|association_with_transcript=-46bp_to_ENSMUST00000025254,NM_144862,uc008eiv.1_5end | |||
|description=CAGE_peak_3_at_Lims2_5end | |||
|id=chr18:32091107..32091114,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,3.91e-09,2;CL:0000328,3.91e-09,2;CL:0002573,3.91e-09,2;CL:0002376,3.91e-09,2;CL:0000218,3.91e-09,2;CL:0000692,3.91e-09,2;CL:0002377,3.91e-09,2;CL:0002375,3.91e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!2.55e-07!25;UBERON:0002330!2.55e-07!25;UBERON:0003914!4.81e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.54e-07,25;UBERON:0002330,2.54e-07,25;UBERON:0005631,9.18e-07,3;UBERON:0000478,9.18e-07,3;UBERON:0000158,9.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0.183546752161682,1.56478268869608,0.218025156380447,1.09843091367236,0.58328969722285,0.839918529752175,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,1.12552522006336,0.30559649555362,0,0,0,1.06016670666458,2.64500460373749,0.579728977403356,0.860423876981386,3.39985666853875,1.61910957491345,0,0.896053774194671,0.561777680527007,0.852151612890289,0.259786004602869,1.06001872353102,0,1.28326477414318,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,2.71914464507811,1.3013942122792,0,0,0.441683036920787,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.20778804455956,0.811206315338788,0,0.124406970610093,0.252722758433675,0,0,0,0.180062129805349,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0.467061369468678,0.329119699826961,0.164167464079095,0.162137619091711,0.730999937126662,0.219550115291051,0.939444931322602,0,0.102904612379284,0,0,0,0,0,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0,0,0.58489226135736,0,0.216138049874694,0.398282546508734,0,0,0,0.203651327845314,0,0.350679099451593,0.126473074248515,0.295220295959204,0,0.493588655687202,1.1858105083486,0,0,0,0,0.241177159752417,0.25462585178142,0.863088412352432,0.810676133875177,0.274561413188081,0,0.372140947668503,1.5601883655728,0.757736633841335,1.25578189465339,1.4473305640901,2.03228509183265,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.975668239288994,0.472905432318573,0.664394068946325,0.478364305972461,2.45794972073607,0.690739927463582,1.15719246865209,0,0,0.491764273019036,0.275936746304732,0.642202359951168,0.468846746368813,0,0,0,0,0,0,0.445597348164788,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.567760340833074,0,0,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,1.90648863777438,0.220528398054962,0.49465875882444,0,0.482503399425247,0,0.328281799490123,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.578574190077352,0.26175594198403,0.777689839750757,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0.335769232728157,0.965947970160952,1.50145980360946,0.549454872801795,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666740183404846,0,0,0,0.25347929989024,0.565879024158229,0,0,0.34461281373368,0,0.579421629724277,0.192909220463705,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0.818462086339379,0,0.385813221962283,0.249810577937946,0,0.644613162144895,0.956441660344217,0.220591419119515,0.463735671240843 | |||
|short_description=p3@Lims2 | |||
}} |
Revision as of 15:53, 13 September 2013
Short description: | p3@Lims2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lims2_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENSMUST00000025254, NM_144862, uc008eiv.1_5end |
EntrezGene: | Lims2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 3.91e-09 | 2 |
myelin accumulating cell | 3.91e-09 | 2 |
Schwann cell | 3.91e-09 | 2 |
non-myelinating Schwann cell | 3.91e-09 | 2 |
myelinating Schwann cell;;Schwann cell | 3.91e-09 | 2 |
terminal Schwann cell | 3.91e-09 | 2 |
immature Schwann cell | 3.91e-09 | 2 |
Schwann cell precursor | 3.91e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.54e-07 | 25 |
exocrine system | 2.54e-07 | 25 |
extraembryonic membrane | 9.18e-07 | 3 |
extraembryonic structure | 9.18e-07 | 3 |
membranous layer | 9.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.