FFCP PHASE1:Hg19::chr5:54275165..54275184,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1278|description=CAGE_peak_at_chr5:54275165..54275184,-|id=chr5:54275165..54275184,-|ontology_enrichment_celltype=CL:0000222!1.26e-26!119;CL:0002139!1.84e-22!24;CL:0000071!1.29e-19!18;CL:0002546!1.29e-19!18;CL:0000115!1.84e-16!35;CL:0000680!1.21e-15!57;CL:0000056!1.21e-15!57;CL:0000355!1.21e-15!57;CL:0000359!3.21e-14!32;CL:0002078!5.37e-14!44;CL:0000192!3.36e-13!42;CL:0000514!3.36e-13!42;CL:0000213!9.11e-13!57;CL:0000215!9.11e-13!57;CL:0000187!4.57e-12!54;CL:0000183!4.92e-12!59;CL:0000220!5.58e-11!246;CL:0002321!8.35e-11!248;CL:0000393!2.08e-10!60;CL:0000211!2.08e-10!60;CL:0002539!7.64e-10!10;CL:0000055!2.16e-09!180;CL:0002144!4.53e-09!3;CL:0002618!1.89e-08!3;CL:1000413!6.17e-08!9;CL:0002543!4.41e-07!6;CL:0002545!4.45e-07!2|ontology_enrichment_celltype_v019=CL:0002545;8.54e-23;2!CL:0002595;3.47e-21;5!CL:0002573;7.82e-16;2!CL:1000413;1.13e-11;9!CL:0000359;2.32e-08;32!CL:0002544;3.13e-08;6!CL:0002593;4.55e-07;2|ontology_enrichment_celltype_v019_2=CL:0002545,7.65e-23,2;CL:0002595,3.24e-21,5;CL:0002573,5.38e-16,2;CL:1000413,1.13e-11,9;CL:0000359,1.00e-08,32;CL:0002544,3.02e-08,6;CL:0000222,6.81e-08,121;CL:0002593,4.56e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4231;9.01e-07;2!DOID:1907;9.01e-07;2|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!1.44e-28!69;UBERON:0001981!6.85e-27!60;UBERON:0007500!6.85e-27!60;UBERON:0004537!6.85e-27!60;UBERON:0006965!6.85e-27!60;UBERON:0002049!9.82e-26!79;UBERON:0007798!9.82e-26!79;UBERON:0001637!4.66e-22!42;UBERON:0003509!4.66e-22!42;UBERON:0004572!4.66e-22!42;UBERON:0004872!8.01e-22!84;UBERON:0004573!5.32e-21!33;UBERON:0004571!5.32e-21!33;UBERON:0000490!7.43e-21!138;UBERON:0004535!3.70e-20!110;UBERON:0001986!1.29e-19!18;UBERON:0004638!1.29e-19!18;UBERON:0004852!1.29e-19!18;UBERON:0001009!2.23e-19!113;UBERON:0006914!2.64e-18!25;UBERON:0000487!3.03e-18!22;UBERON:0003914!4.51e-18!118;UBERON:0001134!2.96e-14!61;UBERON:0002036!2.96e-14!61;UBERON:0003082!2.96e-14!61;UBERON:0002385!1.25e-13!63;UBERON:0001015!1.25e-13!63;UBERON:0000383!1.25e-13!63;UBERON:0000947!9.49e-12!21;UBERON:0010191!9.49e-12!21;UBERON:0004290!9.95e-12!70;UBERON:0000486!2.33e-10!82;UBERON:0004237!7.64e-10!10;UBERON:0004695!7.64e-10!10;UBERON:0002111!7.64e-10!10;UBERON:0004178!7.64e-10!10;UBERON:0000119!3.43e-09!312;UBERON:0000914!4.43e-09!83;UBERON:0002329!4.43e-09!83;UBERON:0003077!4.43e-09!83;UBERON:0003059!4.43e-09!83;UBERON:0007282!4.43e-09!83;UBERON:0009618!4.43e-09!83;UBERON:0007285!4.43e-09!83;UBERON:0001915!4.53e-09!3;UBERON:0001982!4.53e-09!3;UBERON:0000025!5.54e-09!194;UBERON:0000483!8.49e-09!309;UBERON:0000477!1.31e-08!286;UBERON:0004111!1.41e-08!241;UBERON:0003915!6.17e-08!9;UBERON:0004700!6.17e-08!9;UBERON:0001917!6.17e-08!9;UBERON:0005800!4.45e-07!2;UBERON:0001515!4.45e-07!2|ontology_enrichment_uberon_v019=UBERON:0005800;8.54e-23;2!UBERON:0001515;8.54e-23;2!UBERON:0003834;3.47e-21;5!UBERON:0001533;3.47e-21;5!UBERON:0004573;9.88e-16;33!UBERON:0004571;9.88e-16;33!UBERON:0003513;2.58e-15;7!UBERON:0001637;2.47e-13;42!UBERON:0003509;2.47e-13;42!UBERON:0004572;2.47e-13;42!UBERON:0003915;1.13e-11;9!UBERON:0004700;1.13e-11;9!UBERON:0001917;1.13e-11;9!UBERON:0000947;1.42e-08;21!UBERON:0010191;1.42e-08;21!UBERON:0003914;3.20e-08;74!UBERON:0002456;4.55e-07;2!UBERON:0007500;9.63e-07;56!UBERON:0001981;9.63e-07;56!UBERON:0004537;9.63e-07;56!UBERON:0000055;9.69e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0005800,7.65e-23,2;UBERON:0001515,7.65e-23,2;UBERON:0003834,3.24e-21,5;UBERON:0001533,3.24e-21,5;UBERON:0001637,3.78e-16,42;UBERON:0003509,3.78e-16,42;UBERON:0004572,3.78e-16,42;UBERON:0004573,6.01e-16,33;UBERON:0004571,6.01e-16,33;UBERON:0003513,2.46e-15,7;UBERON:0003915,1.13e-11,9;UBERON:0004700,1.13e-11,9;UBERON:0001917,1.13e-11,9;UBERON:0007500,3.04e-11,59;UBERON:0001981,3.04e-11,59;UBERON:0004537,3.04e-11,59;UBERON:0006965,3.04e-11,59;UBERON:0004872,9.66e-10,83;UBERON:0000055,1.23e-09,68;UBERON:0000947,1.31e-08,21;UBERON:0010191,1.31e-08,21;UBERON:0002049,2.79e-08,78;UBERON:0007798,2.79e-08,78;UBERON:0003914,3.49e-08,117;UBERON:0000915,2.11e-07,52;UBERON:0004535,3.84e-07,109;UBERON:0002456,4.56e-07,2;UBERON:0001009,6.41e-07,112|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,3.02629846134074,0.626984899610432,0,0.35576626268671,0.66944122552934,0.805658634218294,0.760272105718513,0.24406205754817,1.10298924103761,1.62028389576352,0.714397826272638,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.759783069987479,0,0,0,0,1.06748995729705,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,1.03850885836724,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,2.15915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,1.5740617341532,0.6970372701606,0.616067160352178,0,0,0.55597265731176,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,15.8413768260335,0,0.136499911407986,0,0,0,7.96126770289464,3.94605796728386,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.323967823502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15144807199414,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0,0.477890301491107,0,0,0,0,0,0,0,1.22061219961398,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.489473409012935,0,0,0,1.59020231351293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0766320189947,1.95990830946063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.672791175483681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:54275165..54275184,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1278 | |||
|description=CAGE_peak_at_chr5:54275165..54275184,- | |||
|id=chr5:54275165..54275184,- | |||
|ontology_enrichment_celltype=CL:0000222!1.26e-26!119;CL:0002139!1.84e-22!24;CL:0000071!1.29e-19!18;CL:0002546!1.29e-19!18;CL:0000115!1.84e-16!35;CL:0000680!1.21e-15!57;CL:0000056!1.21e-15!57;CL:0000355!1.21e-15!57;CL:0000359!3.21e-14!32;CL:0002078!5.37e-14!44;CL:0000192!3.36e-13!42;CL:0000514!3.36e-13!42;CL:0000213!9.11e-13!57;CL:0000215!9.11e-13!57;CL:0000187!4.57e-12!54;CL:0000183!4.92e-12!59;CL:0000220!5.58e-11!246;CL:0002321!8.35e-11!248;CL:0000393!2.08e-10!60;CL:0000211!2.08e-10!60;CL:0002539!7.64e-10!10;CL:0000055!2.16e-09!180;CL:0002144!4.53e-09!3;CL:0002618!1.89e-08!3;CL:1000413!6.17e-08!9;CL:0002543!4.41e-07!6;CL:0002545!4.45e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002545;8.54e-23;2!CL:0002595;3.47e-21;5!CL:0002573;7.82e-16;2!CL:1000413;1.13e-11;9!CL:0000359;2.32e-08;32!CL:0002544;3.13e-08;6!CL:0002593;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002545,7.65e-23,2;CL:0002595,3.24e-21,5;CL:0002573,5.38e-16,2;CL:1000413,1.13e-11,9;CL:0000359,1.00e-08,32;CL:0002544,3.02e-08,6;CL:0000222,6.81e-08,121;CL:0002593,4.56e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;9.01e-07;2!DOID:1907;9.01e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.44e-28!69;UBERON:0001981!6.85e-27!60;UBERON:0007500!6.85e-27!60;UBERON:0004537!6.85e-27!60;UBERON:0006965!6.85e-27!60;UBERON:0002049!9.82e-26!79;UBERON:0007798!9.82e-26!79;UBERON:0001637!4.66e-22!42;UBERON:0003509!4.66e-22!42;UBERON:0004572!4.66e-22!42;UBERON:0004872!8.01e-22!84;UBERON:0004573!5.32e-21!33;UBERON:0004571!5.32e-21!33;UBERON:0000490!7.43e-21!138;UBERON:0004535!3.70e-20!110;UBERON:0001986!1.29e-19!18;UBERON:0004638!1.29e-19!18;UBERON:0004852!1.29e-19!18;UBERON:0001009!2.23e-19!113;UBERON:0006914!2.64e-18!25;UBERON:0000487!3.03e-18!22;UBERON:0003914!4.51e-18!118;UBERON:0001134!2.96e-14!61;UBERON:0002036!2.96e-14!61;UBERON:0003082!2.96e-14!61;UBERON:0002385!1.25e-13!63;UBERON:0001015!1.25e-13!63;UBERON:0000383!1.25e-13!63;UBERON:0000947!9.49e-12!21;UBERON:0010191!9.49e-12!21;UBERON:0004290!9.95e-12!70;UBERON:0000486!2.33e-10!82;UBERON:0004237!7.64e-10!10;UBERON:0004695!7.64e-10!10;UBERON:0002111!7.64e-10!10;UBERON:0004178!7.64e-10!10;UBERON:0000119!3.43e-09!312;UBERON:0000914!4.43e-09!83;UBERON:0002329!4.43e-09!83;UBERON:0003077!4.43e-09!83;UBERON:0003059!4.43e-09!83;UBERON:0007282!4.43e-09!83;UBERON:0009618!4.43e-09!83;UBERON:0007285!4.43e-09!83;UBERON:0001915!4.53e-09!3;UBERON:0001982!4.53e-09!3;UBERON:0000025!5.54e-09!194;UBERON:0000483!8.49e-09!309;UBERON:0000477!1.31e-08!286;UBERON:0004111!1.41e-08!241;UBERON:0003915!6.17e-08!9;UBERON:0004700!6.17e-08!9;UBERON:0001917!6.17e-08!9;UBERON:0005800!4.45e-07!2;UBERON:0001515!4.45e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0005800;8.54e-23;2!UBERON:0001515;8.54e-23;2!UBERON:0003834;3.47e-21;5!UBERON:0001533;3.47e-21;5!UBERON:0004573;9.88e-16;33!UBERON:0004571;9.88e-16;33!UBERON:0003513;2.58e-15;7!UBERON:0001637;2.47e-13;42!UBERON:0003509;2.47e-13;42!UBERON:0004572;2.47e-13;42!UBERON:0003915;1.13e-11;9!UBERON:0004700;1.13e-11;9!UBERON:0001917;1.13e-11;9!UBERON:0000947;1.42e-08;21!UBERON:0010191;1.42e-08;21!UBERON:0003914;3.20e-08;74!UBERON:0002456;4.55e-07;2!UBERON:0007500;9.63e-07;56!UBERON:0001981;9.63e-07;56!UBERON:0004537;9.63e-07;56!UBERON:0000055;9.69e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005800,7.65e-23,2;UBERON:0001515,7.65e-23,2;UBERON:0003834,3.24e-21,5;UBERON:0001533,3.24e-21,5;UBERON:0001637,3.78e-16,42;UBERON:0003509,3.78e-16,42;UBERON:0004572,3.78e-16,42;UBERON:0004573,6.01e-16,33;UBERON:0004571,6.01e-16,33;UBERON:0003513,2.46e-15,7;UBERON:0003915,1.13e-11,9;UBERON:0004700,1.13e-11,9;UBERON:0001917,1.13e-11,9;UBERON:0007500,3.04e-11,59;UBERON:0001981,3.04e-11,59;UBERON:0004537,3.04e-11,59;UBERON:0006965,3.04e-11,59;UBERON:0004872,9.66e-10,83;UBERON:0000055,1.23e-09,68;UBERON:0000947,1.31e-08,21;UBERON:0010191,1.31e-08,21;UBERON:0002049,2.79e-08,78;UBERON:0007798,2.79e-08,78;UBERON:0003914,3.49e-08,117;UBERON:0000915,2.11e-07,52;UBERON:0004535,3.84e-07,109;UBERON:0002456,4.56e-07,2;UBERON:0001009,6.41e-07,112 | |||
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|short_description=p@chr5:54275165..54275184,- | |||
}} |
Revision as of 15:52, 13 September 2013
Short description: | p@chr5:54275165..54275184, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:54275165..54275184, - |
Coexpression cluster: | C1278_Smooth_Endothelial_osteosarcoma_schwannoma_large_Renal_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 7.65e-23 | 2 |
smooth muscle cell of the subclavian artery | 3.24e-21 | 5 |
Schwann cell | 5.38e-16 | 2 |
endothelial cell of artery | 1.13e-11 | 9 |
vascular associated smooth muscle cell | 1.00e-08 | 32 |
aortic endothelial cell | 3.02e-08 | 6 |
mesodermal cell | 6.81e-08 | 121 |
smooth muscle cell of the internal thoracic artery | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 7.65e-23 | 2 |
thoracic aorta | 7.65e-23 | 2 |
thoracic segment blood vessel | 3.24e-21 | 5 |
subclavian artery | 3.24e-21 | 5 |
artery | 3.78e-16 | 42 |
arterial blood vessel | 3.78e-16 | 42 |
arterial system | 3.78e-16 | 42 |
systemic artery | 6.01e-16 | 33 |
systemic arterial system | 6.01e-16 | 33 |
trunk blood vessel | 2.46e-15 | 7 |
endothelial tube | 1.13e-11 | 9 |
arterial system endothelium | 1.13e-11 | 9 |
endothelium of artery | 1.13e-11 | 9 |
epithelial tube open at both ends | 3.04e-11 | 59 |
blood vessel | 3.04e-11 | 59 |
blood vasculature | 3.04e-11 | 59 |
vascular cord | 3.04e-11 | 59 |
splanchnic layer of lateral plate mesoderm | 9.66e-10 | 83 |
vessel | 1.23e-09 | 68 |
aorta | 1.31e-08 | 21 |
aortic system | 1.31e-08 | 21 |
vasculature | 2.79e-08 | 78 |
vascular system | 2.79e-08 | 78 |
epithelial tube | 3.49e-08 | 117 |
thoracic segment of trunk | 2.11e-07 | 52 |
cardiovascular system | 3.84e-07 | 109 |
internal thoracic artery | 4.56e-07 | 2 |
circulatory system | 6.41e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.