FFCP PHASE1:Mm9::chr18:24688553..24688630,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=225283|HGNC=|UniProt=Q8VDS4|association_with_transcript=74bp_to_ENSMUST00000046206,NM_144861,uc008egu.1_5end|description=CAGE_peak_1_at_Rprd1a_5end|id=chr18:24688553..24688630,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=14.4133962394315,1.74487703819681,4.09499315450582,3.32710632437513,5.50985302940982,12.7588246653036,9.57811826441655,9.55512593467664,11.9670413828917,11.0010327371337,8.04724450659873,9.09402612546835,11.1280474455284,9.00430144915673,9.99329285446988,9.31386229993199,7.69518065940961,7.25562980323947,7.26706498110415,10.1853516431527,13.6919697143222,17.0780436065523,16.4555867157529,7.99962113967033,7.57050627521661,2.8711598205751,5.1691439539089,9.26526300549323,5.51067916423484,6.80481350351813,7.76056787293567,8.89042942843484,7.38077745101484,0,14.4425809875637,11.137721239019,15.7210404322024,7.95210098400125,10.1573594788094,10.470474879476,5.29408339227913,5.46436387966757,3.39857247121808,9.56815816614387,10.644577778049,20.74078299427,7.04152209913235,4.36050312760893,4.39372365468944,11.665793944457,6.29938897314131,0,5.5368259999053,2.90144856804538,10.4189077734164,18.0081605225163,27.7937436740594,26.814948798427,1.82084814773638,2.11596391708813,1.90149421051854,5.08266798103698,7.11435836888911,2.2497492932035,2.96659908770092,5.6838409195688,3.29560121570245,5.76327457982332,4.76972216618997,2.8351247049655,3.99617426567626,5.99867067247988,5.07997644188711,5.26710436624302,3.83381884072945,3.67687514644008,16.5173821499083,15.8332299225633,14.2854075928306,2.90149833006426,2.74462930807229,5.73004707612436,10.0505879640497,10.1297269805702,11.6126668310376,13.8475435172624,11.2473627831291,7.26957838718672,8.5570598466498,15.1898835814639,23.7688880735376,10.3250865237766,3.39985666853875,8.63525106620507,24.0417274455638,21.0572636935748,9.97155382935438,19.7699174190547,21.0426663728324,15.1936017039446,11.1266301623578,14.115912515575,35.6727335589304,21.3320010945999,12.9894624606728,14.4415123320806,15.1657333504435,13.4736978068491,20.9739685754209,16.92240385339,12.4909435271618,15.5277393939192,12.2226213545711,14.1679282119465,18.2262496060342,12.9436589069566,8.15743393523434,14.4599356919912,7.07688441559899,12.1325137460557,9.93786833071771,12.1218813283806,16.775258509631,16.3957246326466,19.6879904404648,8.43008282188352,7.18890747035522,3.59941638596045,7.37007317023775,12.5824137100051,14.1825186873774,5.6544458450789,11.8200537730748,14.8314965251592,13.0906468072523,17.1975738851823,20.8770695893148,25.0058010926287,61.9170758162503,18.9397670297827,13.4024056251585,10.3455946995063,10.6236656585156,15.6733010549144,12.3146063463903,11.0177799444971,10.9631017734883,16.557015727297,11.2095356325078,17.9650776159428,19.7065259063623,14.9053098050751,26.6925359256574,22.984642990463,26.3401134602168,14.52950147775,7.72434506044558,6.43369767786788,8.24074148247219,13.8774267598786,11.2572508790926,11.1638478105829,13.9679393995274,13.9702604540657,19.4376562238097,21.1605889722871,17.9743178937745,21.2512923108248,23.0383789878873,19.7000956894914,20.2672023864639,18.1287984407412,20.6377108373588,25.2308067269499,13.24826675954,6.17427674275707,5.28670052774077,6.08236303326152,10.4511242762265,19.7401171081373,17.0105048945163,14.9245808221273,13.1203045868473,11.223311940641,10.4396393539793,7.41145296258049,9.0480675168097,7.36138946552258,7.21367122340745,8.98819408654222,10.8069024937347,10.9527700289902,9.67306294860717,14.1668155636064,19.1603150644237,17.7176655225423,14.7403890247396,15.2194729161991,15.0502958355732,11.2183712464498,15.3858753284547,11.4759362447274,14.2297261001831,13.0139182458553,11.2038627214526,15.0657615297852,13.7944882544182,12.5412123071257,15.2775511068852,12.9463261852865,12.6465476884528,7.4131581560782,14.3768206527355,9.30352369171258,11.5453939052387,11.8712072635143,9.14926808961752,13.9908621195376,21.2466168691595,13.0749074121634,15.8076027148765,16.6350184059684,16.8976978767722,19.9332446355761,18.8054476299951,19.5133647857799,16.7093252752562,16.3883870340093,16.7427507090361,20.646777654183,12.9513736399422,20.9741134943192,13.5712155545345,12.5098307278303,17.2117495556663,24.2824336748165,15.8945084087914,19.6915633474901,5.24591825205361,7.57412781613119,16.7219356290616,22.2550084249084,19.3881057959519,23.6579109973027,18.9378872970035,28.3076530788832,18.2164815753702,16.0740721851222,20.5549644532192,11.2462460747632,18.8780313326997,11.3961986347043,14.985600260529,17.9817434040064,13.2745138339963,10.1967867185092,12.6975893925195,11.5049098651098,6.79194353625777,16.6014979889721,16.7978390559344,19.2672876623078,17.1118741624666,10.4292130118819,13.7044191147498,7.21948802737308,22.8094535855038,14.7650097105674,8.02023839453078,12.6458850668639,18.798064766081,13.0209236849512,18.5940393280397,7.307158778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| ||
|EntrezGene=225283 | |||
|HGNC= | |||
|UniProt=Q8VDS4 | |||
|association_with_transcript=74bp_to_ENSMUST00000046206,NM_144861,uc008egu.1_5end | |||
|description=CAGE_peak_1_at_Rprd1a_5end | |||
|id=chr18:24688553..24688630,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=14.4133962394315,1.74487703819681,4.09499315450582,3.32710632437513,5.50985302940982,12.7588246653036,9.57811826441655,9.55512593467664,11.9670413828917,11.0010327371337,8.04724450659873,9.09402612546835,11.1280474455284,9.00430144915673,9.99329285446988,9.31386229993199,7.69518065940961,7.25562980323947,7.26706498110415,10.1853516431527,13.6919697143222,17.0780436065523,16.4555867157529,7.99962113967033,7.57050627521661,2.8711598205751,5.1691439539089,9.26526300549323,5.51067916423484,6.80481350351813,7.76056787293567,8.89042942843484,7.38077745101484,0,14.4425809875637,11.137721239019,15.7210404322024,7.95210098400125,10.1573594788094,10.470474879476,5.29408339227913,5.46436387966757,3.39857247121808,9.56815816614387,10.644577778049,20.74078299427,7.04152209913235,4.36050312760893,4.39372365468944,11.665793944457,6.29938897314131,0,5.5368259999053,2.90144856804538,10.4189077734164,18.0081605225163,27.7937436740594,26.814948798427,1.82084814773638,2.11596391708813,1.90149421051854,5.08266798103698,7.11435836888911,2.2497492932035,2.96659908770092,5.6838409195688,3.29560121570245,5.76327457982332,4.76972216618997,2.8351247049655,3.99617426567626,5.99867067247988,5.07997644188711,5.26710436624302,3.83381884072945,3.67687514644008,16.5173821499083,15.8332299225633,14.2854075928306,2.90149833006426,2.74462930807229,5.73004707612436,10.0505879640497,10.1297269805702,11.6126668310376,13.8475435172624,11.2473627831291,7.26957838718672,8.5570598466498,15.1898835814639,23.7688880735376,10.3250865237766,3.39985666853875,8.63525106620507,24.0417274455638,21.0572636935748,9.97155382935438,19.7699174190547,21.0426663728324,15.1936017039446,11.1266301623578,14.115912515575,35.6727335589304,21.3320010945999,12.9894624606728,14.4415123320806,15.1657333504435,13.4736978068491,20.9739685754209,16.92240385339,12.4909435271618,15.5277393939192,12.2226213545711,14.1679282119465,18.2262496060342,12.9436589069566,8.15743393523434,14.4599356919912,7.07688441559899,12.1325137460557,9.93786833071771,12.1218813283806,16.775258509631,16.3957246326466,19.6879904404648,8.43008282188352,7.18890747035522,3.59941638596045,7.37007317023775,12.5824137100051,14.1825186873774,5.6544458450789,11.8200537730748,14.8314965251592,13.0906468072523,17.1975738851823,20.8770695893148,25.0058010926287,61.9170758162503,18.9397670297827,13.4024056251585,10.3455946995063,10.6236656585156,15.6733010549144,12.3146063463903,11.0177799444971,10.9631017734883,16.557015727297,11.2095356325078,17.9650776159428,19.7065259063623,14.9053098050751,26.6925359256574,22.984642990463,26.3401134602168,14.52950147775,7.72434506044558,6.43369767786788,8.24074148247219,13.8774267598786,11.2572508790926,11.1638478105829,13.9679393995274,13.9702604540657,19.4376562238097,21.1605889722871,17.9743178937745,21.2512923108248,23.0383789878873,19.7000956894914,20.2672023864639,18.1287984407412,20.6377108373588,25.2308067269499,13.24826675954,6.17427674275707,5.28670052774077,6.08236303326152,10.4511242762265,19.7401171081373,17.0105048945163,14.9245808221273,13.1203045868473,11.223311940641,10.4396393539793,7.41145296258049,9.0480675168097,7.36138946552258,7.21367122340745,8.98819408654222,10.8069024937347,10.9527700289902,9.67306294860717,14.1668155636064,19.1603150644237,17.7176655225423,14.7403890247396,15.2194729161991,15.0502958355732,11.2183712464498,15.3858753284547,11.4759362447274,14.2297261001831,13.0139182458553,11.2038627214526,15.0657615297852,13.7944882544182,12.5412123071257,15.2775511068852,12.9463261852865,12.6465476884528,7.4131581560782,14.3768206527355,9.30352369171258,11.5453939052387,11.8712072635143,9.14926808961752,13.9908621195376,21.2466168691595,13.0749074121634,15.8076027148765,16.6350184059684,16.8976978767722,19.9332446355761,18.8054476299951,19.5133647857799,16.7093252752562,16.3883870340093,16.7427507090361,20.646777654183,12.9513736399422,20.9741134943192,13.5712155545345,12.5098307278303,17.2117495556663,24.2824336748165,15.8945084087914,19.6915633474901,5.24591825205361,7.57412781613119,16.7219356290616,22.2550084249084,19.3881057959519,23.6579109973027,18.9378872970035,28.3076530788832,18.2164815753702,16.0740721851222,20.5549644532192,11.2462460747632,18.8780313326997,11.3961986347043,14.985600260529,17.9817434040064,13.2745138339963,10.1967867185092,12.6975893925195,11.5049098651098,6.79194353625777,16.6014979889721,16.7978390559344,19.2672876623078,17.1118741624666,10.4292130118819,13.7044191147498,7.21948802737308,22.8094535855038,14.7650097105674,8.02023839453078,12.6458850668639,18.798064766081,13.0209236849512,18.5940393280397,7.30715877875038,14.7843176080138,10.3797714723272,16.9806866502321,12.2015827176695,19.8601244835964,15.6210475563924,12.6534684643325,10.833299383174,6.99554007911642,15.5757253688828,12.815316059839,10.3193433981611,11.6672552242918,14.6927396463659,12.4391747226133,11.8964650067392,8.66889992968662,7.27747552083022,7.60099855924331,13.3653886522116,13.6024477239888,20.5352661798117,19.980988052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| |||
|short_description=p1@Rprd1a | |||
}} | |||
Revision as of 15:50, 13 September 2013
| Short description: | p1@Rprd1a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Rprd1a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 74bp_to_ENSMUST00000046206, NM_144861, uc008egu.1_5end |
| EntrezGene: | Rprd1a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
