FFCP PHASE1:Mm9::chr17:88037750..88037755,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=574|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:88037750..88037755,+|id=chr17:88037750..88037755,+|ontology_enrichment_celltype=CL:0002563!1.28e-07!9;CL:0002251!1.28e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.25e-13,9;CL:0002251,1.25e-13,9;CL:0002076,8.06e-13,15;CL:0000066,3.25e-12,25;CL:0000223,3.12e-10,20;CL:0000239,9.50e-10,6;CL:0000677,9.50e-10,6;CL:0000584,9.50e-10,6;CL:0000075,3.37e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.06e-21!43;UBERON:0005409!8.46e-19!59;UBERON:0001007!8.08e-15!128;UBERON:0001555!8.08e-15!128;UBERON:0007026!8.08e-15!128;UBERON:0004119!4.38e-14!130;UBERON:0000925!4.38e-14!130;UBERON:0006595!4.38e-14!130;UBERON:0004921!1.22e-13!126;UBERON:0004185!1.22e-13!126;UBERON:0000344!8.22e-12!15;UBERON:0001242!2.72e-10!13;UBERON:0000060!2.72e-10!13;UBERON:0001262!2.72e-10!13;UBERON:0004786!2.72e-10!13;UBERON:0003350!1.28e-07!9;UBERON:0004808!1.28e-07!9;UBERON:0001277!1.28e-07!9;UBERON:0000485!1.61e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.77e-37,31;UBERON:0005409,3.08e-30,47;UBERON:0000344,5.66e-22,15;UBERON:0001242,6.06e-19,13;UBERON:0001262,6.06e-19,13;UBERON:0004786,6.06e-19,13;UBERON:0004923,1.12e-13,24;UBERON:0003350,1.25e-13,9;UBERON:0004808,1.25e-13,9;UBERON:0001277,1.25e-13,9;UBERON:0001007,8.26e-13,116;UBERON:0001555,8.26e-13,116;UBERON:0007026,8.26e-13,116;UBERON:0004119,2.13e-12,118;UBERON:0000925,2.13e-12,118;UBERON:0006595,2.13e-12,118;UBERON:0004921,3.27e-11,114;UBERON:0000485,9.72e-11,11;UBERON:0002108,9.82e-07,4|phase1_expression=0.480446541314382,3.48975407639361,4.54999239389536,8.77146212789807,9.01612313903425,1.6787927191189,5.13947809310157,0,0.422366166455,0.70219357896598,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,6.55968933452967,6.65286915094793,5.16808767703518,3.01533397311352,3.44753972297422,4.18051522804023,1.76421090831952,3.10422714917427,0,0,0,3.75507105676657,2.82598897109437,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,1.94841936910093,1.77351905832569,1.51657333504435,1.82694207550496,0,0,0,0,0,0,0,0.125666591329675,1.48316980640624,0,0,0.161766849947409,0,0,5.59175283654366,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.758168275301024,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0,0.258703370739016,0.215567992932842,0,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,2.64450566663544,0.853153002140936,1.16118335930219,1.28867461322093,1.81515172161008,1.11189021922435,0.951128130562796,9.96511029243474,2.47048432086016,4.52403375840485,1.79060824837036,2.9244613067868,8.08937467788799,13.1844210423563,9.35963984295526,0.569003702859245,1.02823661348756,0,0.610953983535943,0.581857461502877,0.771494018793504,0.69560190836683,0.885660887877613,0.784993639206874,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0,0.491589944147214,0.518054945597687,0.867894351489069,0,0,1.47529281905711,2.20749397043786,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,1.15479086080775,0,0.728341908464944,1.51161778482376,1.13163047853539,0.295301892880773,1.22974059177571,0.775284879504663,1.45413491791002,2.49548164869305,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.646793418913773,1.50035924522115,0.532020700926821,1.60531935841864,1.31639216481697,0.304464949114599,0,0,1.32317038832977,1.31909002353184,0.484393280087717,1.02531972377865,1.3130957840345,1.80554989719567,8.45294426226567,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.972048067396211,2.09088296014469,0.87345025498471,1.07891477107857,1.1571483801547,1.04702376793612,5.57344385154709,3.10669656543463,0,0.299033092087958,0.165458490457098,0,0,0,0.117357238645754,0.5208175393758,0.734015410979976,0,0.288030006257865,0,0.810900861160657,0.513554785824136,0.129920822977795,0.537080087002444,0.596044064343795,0.360586348559907,0.295379054349154,0.100966449948148,0,0,0.194915761479505,0.481059208201647,0.233753804363138,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0.563047426353546,1.28206136987086,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0,0.412070114477788,0,0,0,0.377252682772152,0.468207537349412,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.887379030796687,0.238436189947321,0.581385666529314,0.0941093804153306,0.25384382367503,0,0.526139422875686,0,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0.935726433781634,0.214871054048298,0,0,0|short_description=p@chr17:88037750..88037755,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=574 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:88037750..88037755,+ | |||
|id=chr17:88037750..88037755,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.28e-07!9;CL:0002251!1.28e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.25e-13,9;CL:0002251,1.25e-13,9;CL:0002076,8.06e-13,15;CL:0000066,3.25e-12,25;CL:0000223,3.12e-10,20;CL:0000239,9.50e-10,6;CL:0000677,9.50e-10,6;CL:0000584,9.50e-10,6;CL:0000075,3.37e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.06e-21!43;UBERON:0005409!8.46e-19!59;UBERON:0001007!8.08e-15!128;UBERON:0001555!8.08e-15!128;UBERON:0007026!8.08e-15!128;UBERON:0004119!4.38e-14!130;UBERON:0000925!4.38e-14!130;UBERON:0006595!4.38e-14!130;UBERON:0004921!1.22e-13!126;UBERON:0004185!1.22e-13!126;UBERON:0000344!8.22e-12!15;UBERON:0001242!2.72e-10!13;UBERON:0000060!2.72e-10!13;UBERON:0001262!2.72e-10!13;UBERON:0004786!2.72e-10!13;UBERON:0003350!1.28e-07!9;UBERON:0004808!1.28e-07!9;UBERON:0001277!1.28e-07!9;UBERON:0000485!1.61e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.77e-37,31;UBERON:0005409,3.08e-30,47;UBERON:0000344,5.66e-22,15;UBERON:0001242,6.06e-19,13;UBERON:0001262,6.06e-19,13;UBERON:0004786,6.06e-19,13;UBERON:0004923,1.12e-13,24;UBERON:0003350,1.25e-13,9;UBERON:0004808,1.25e-13,9;UBERON:0001277,1.25e-13,9;UBERON:0001007,8.26e-13,116;UBERON:0001555,8.26e-13,116;UBERON:0007026,8.26e-13,116;UBERON:0004119,2.13e-12,118;UBERON:0000925,2.13e-12,118;UBERON:0006595,2.13e-12,118;UBERON:0004921,3.27e-11,114;UBERON:0000485,9.72e-11,11;UBERON:0002108,9.82e-07,4 | |||
|phase1_expression=0.480446541314382,3.48975407639361,4.54999239389536,8.77146212789807,9.01612313903425,1.6787927191189,5.13947809310157,0,0.422366166455,0.70219357896598,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,6.55968933452967,6.65286915094793,5.16808767703518,3.01533397311352,3.44753972297422,4.18051522804023,1.76421090831952,3.10422714917427,0,0,0,3.75507105676657,2.82598897109437,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,1.94841936910093,1.77351905832569,1.51657333504435,1.82694207550496,0,0,0,0,0,0,0,0.125666591329675,1.48316980640624,0,0,0.161766849947409,0,0,5.59175283654366,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0.758168275301024,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0,0.258703370739016,0.215567992932842,0,0.351902248327898,0.219195732427575,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2429822724977,2.64450566663544,0.853153002140936,1.16118335930219,1.28867461322093,1.81515172161008,1.11189021922435,0.951128130562796,9.96511029243474,2.47048432086016,4.52403375840485,1.79060824837036,2.9244613067868,8.08937467788799,13.1844210423563,9.35963984295526,0.569003702859245,1.02823661348756,0,0.610953983535943,0.581857461502877,0.771494018793504,0.69560190836683,0.885660887877613,0.784993639206874,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0,0.491589944147214,0.518054945597687,0.867894351489069,0,0,1.47529281905711,2.20749397043786,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,1.15479086080775,0,0.728341908464944,1.51161778482376,1.13163047853539,0.295301892880773,1.22974059177571,0.775284879504663,1.45413491791002,2.49548164869305,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.646793418913773,1.50035924522115,0.532020700926821,1.60531935841864,1.31639216481697,0.304464949114599,0,0,1.32317038832977,1.31909002353184,0.484393280087717,1.02531972377865,1.3130957840345,1.80554989719567,8.45294426226567,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.972048067396211,2.09088296014469,0.87345025498471,1.07891477107857,1.1571483801547,1.04702376793612,5.57344385154709,3.10669656543463,0,0.299033092087958,0.165458490457098,0,0,0,0.117357238645754,0.5208175393758,0.734015410979976,0,0.288030006257865,0,0.810900861160657,0.513554785824136,0.129920822977795,0.537080087002444,0.596044064343795,0.360586348559907,0.295379054349154,0.100966449948148,0,0,0.194915761479505,0.481059208201647,0.233753804363138,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0.563047426353546,1.28206136987086,0.428736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0,0.412070114477788,0,0,0,0.377252682772152,0.468207537349412,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.887379030796687,0.238436189947321,0.581385666529314,0.0941093804153306,0.25384382367503,0,0.526139422875686,0,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0,0.935726433781634,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:88037750..88037755,+ | |||
}} |
Revision as of 15:35, 13 September 2013
Short description: | p@chr17:88037750..88037755, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88037750..88037755, + |
Coexpression cluster: | MCL_coexpression_mm9:574 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.25e-13 | 9 |
epithelial cell of alimentary canal | 1.25e-13 | 9 |
endo-epithelial cell | 8.06e-13 | 15 |
epithelial cell | 3.25e-12 | 25 |
endodermal cell | 3.12e-10 | 20 |
brush border epithelial cell | 9.50e-10 | 6 |
gut absorptive cell | 9.50e-10 | 6 |
enterocyte | 9.50e-10 | 6 |
columnar/cuboidal epithelial cell | 3.37e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.77e-37 | 31 |
gastrointestinal system | 3.08e-30 | 47 |
mucosa | 5.66e-22 | 15 |
intestinal mucosa | 6.06e-19 | 13 |
wall of intestine | 6.06e-19 | 13 |
gastrointestinal system mucosa | 6.06e-19 | 13 |
organ component layer | 1.12e-13 | 24 |
epithelium of mucosa | 1.25e-13 | 9 |
gastrointestinal system epithelium | 1.25e-13 | 9 |
intestinal epithelium | 1.25e-13 | 9 |
digestive system | 8.26e-13 | 116 |
digestive tract | 8.26e-13 | 116 |
primitive gut | 8.26e-13 | 116 |
endoderm-derived structure | 2.13e-12 | 118 |
endoderm | 2.13e-12 | 118 |
presumptive endoderm | 2.13e-12 | 118 |
subdivision of digestive tract | 3.27e-11 | 114 |
simple columnar epithelium | 9.72e-11 | 11 |
small intestine | 9.82e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.