FFCP PHASE1:Mm9::chr17:86566937..86566957,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18754|HGNC=|MCL_coexpression_id=1|UniProt=P16054,B1B1C8|association_with_transcript=-167bp_to_ENSMUST00000097275,NM_011104,uc008dug.2_5end|description=CAGE_peak_3_at_Prkce_5end|id=chr17:86566937..86566957,+|ontology_enrichment_celltype=CL:0000117!2.88e-09!23;CL:0000337!2.88e-09!23;CL:0000540!2.28e-08!33;CL:0000047!2.28e-08!33;CL:0000031!2.28e-08!33;CL:0000404!2.28e-08!33;CL:0000393!7.84e-07!39;CL:0000211!7.84e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,8.90e-11,23;CL:0000337,8.90e-11,23;CL:0000540,1.25e-09,33;CL:0000047,1.25e-09,33;CL:0000031,1.25e-09,33;CL:0000404,1.25e-09,33;CL:0000393,2.28e-07,39;CL:0000211,2.28e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.18e-14!34;UBERON:0001017!4.27e-14!73;UBERON:0005743!4.27e-14!73;UBERON:0001049!1.22e-13!52;UBERON:0005068!1.22e-13!52;UBERON:0006241!1.22e-13!52;UBERON:0007135!1.22e-13!52;UBERON:0000073!4.62e-13!75;UBERON:0001016!4.62e-13!75;UBERON:0000955!6.57e-13!50;UBERON:0006238!6.57e-13!50;UBERON:0002616!2.34e-12!49;UBERON:0002791!6.12e-12!29;UBERON:0003528!6.12e-12!29;UBERON:0001893!6.12e-12!29;UBERON:0000033!2.31e-11!63;UBERON:0003080!1.33e-10!40;UBERON:0002346!4.35e-10!71;UBERON:0003075!4.35e-10!71;UBERON:0007284!4.35e-10!71;UBERON:0002780!4.50e-10!39;UBERON:0001890!4.50e-10!39;UBERON:0006240!4.50e-10!39;UBERON:0003056!8.80e-10!49;UBERON:0004121!1.49e-09!102;UBERON:0000924!1.49e-09!102;UBERON:0006601!1.49e-09!102;UBERON:0000956!2.73e-09!21;UBERON:0001869!2.73e-09!21;UBERON:0000203!2.73e-09!21;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10;UBERON:0002619!2.45e-07!17;UBERON:0000025!9.55e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.35e-20,54;UBERON:0001017,1.46e-19,73;UBERON:0001016,1.78e-18,75;UBERON:0002020,2.60e-18,34;UBERON:0001049,2.69e-18,52;UBERON:0005068,2.69e-18,52;UBERON:0006241,2.69e-18,52;UBERON:0007135,2.69e-18,52;UBERON:0000955,4.20e-15,47;UBERON:0006238,4.20e-15,47;UBERON:0003528,1.05e-14,29;UBERON:0002791,1.05e-14,29;UBERON:0001893,1.05e-14,29;UBERON:0002616,2.21e-14,46;UBERON:0002346,2.33e-14,64;UBERON:0003075,2.33e-14,64;UBERON:0007284,2.33e-14,64;UBERON:0004121,4.08e-13,95;UBERON:0000924,4.08e-13,95;UBERON:0006601,4.08e-13,95;UBERON:0003080,4.39e-13,40;UBERON:0002780,2.20e-12,39;UBERON:0001890,2.20e-12,39;UBERON:0006240,2.20e-12,39;UBERON:0010371,1.01e-11,73;UBERON:0000956,2.72e-11,21;UBERON:0001869,2.72e-11,21;UBERON:0000203,2.72e-11,21;UBERON:0003056,2.47e-10,49;UBERON:0002021,8.21e-10,10;UBERON:0000411,8.21e-10,10;UBERON:0001950,8.21e-10,10;UBERON:0010314,3.61e-09,92;UBERON:0002619,1.04e-08,17;UBERON:0000025,7.25e-08,114;UBERON:0004111,2.47e-07,122|phase1_expression=1.12104192973356,2.79180326111489,2.27499619694768,8.16653370528441,4.00716583957078,0.839396359559449,1.86890112476421,0.516493293766305,0.281577444303333,1.17032263160997,0.856089841127525,0.797721589953364,1.02720437958723,1.04904482902797,0.333109761815663,0,0.699561878128147,2.05050407482854,2.19383093769182,2.12194825899015,1.7008658030214,0.297872853602656,0.522399578277871,0,0.68822784320151,1.72269589234506,1.7230479846363,1.07735616342945,1.90023419456374,1.26015064879965,1.10865255327652,0,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,0,0,0,0,0.629484089877886,1.11514624341466,0.367093504323363,0,0,0.659058548203415,0.194429899074283,0.139986421625363,1.43752564364972,2.68452169692378,1.45072428402269,0.336093799142464,0.771778308107841,0.85960031981627,0,1.82084814773638,1.5869729378161,0.633831403506179,0,0,0,0,0.7104801149461,0.299600110518405,0,2.28117147078651,3.37514845829227,2.10324961351382,3.42781181284564,3.53389665522582,1.46988959057945,1.53352753629178,0.919218786610021,5.50579404996943,3.83062014255563,3.5329502648936,2.37395317914349,2.28719109006024,0.52091337055676,3.35019598801657,3.37657566019008,3.20876320331301,4.41942878210502,3.13217697758026,2.98239113320481,0.227178579999552,0.377857800533928,2.31891590961342,0,0,0,2.59910566979068,1.34408066129201,1.12355536105401,0.511290967734173,0.519572009205738,0.70667914902068,0.985903938436763,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0.505524445014783,1.25602267690966,0,0.445326417194474,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,1.29347577849275,0.753999547978053,1.23597483867187,0.86759614151947,0.884610551949874,0.647067399789637,0.662524555381181,0.969750506270444,1.86391761218122,4.68449275218475,4.81727425670947,1.53274233125155,0.599075622529601,0,0.381210681219194,4.49371918214468,1.37250180845588,4.64921102817598,4.69325664519146,7.41574826257959,4.98691306942944,5.19172041816825,1.42575109390443,0.870848794270651,0.505445516867349,1.89397670297827,0.910843100738926,0.919608417733892,0.360124259610698,0.30140963567143,0.612328492361951,0.768682321709099,0.937017245597288,2.32833033665114,0.431135985865684,1.51284864134255,0.351902248327898,0.43839146485515,1.94633074457919,1.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| ||
|EntrezGene=18754 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P16054,B1B1C8 | |||
|association_with_transcript=-167bp_to_ENSMUST00000097275,NM_011104,uc008dug.2_5end | |||
|description=CAGE_peak_3_at_Prkce_5end | |||
|id=chr17:86566937..86566957,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.88e-09!23;CL:0000337!2.88e-09!23;CL:0000540!2.28e-08!33;CL:0000047!2.28e-08!33;CL:0000031!2.28e-08!33;CL:0000404!2.28e-08!33;CL:0000393!7.84e-07!39;CL:0000211!7.84e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.90e-11,23;CL:0000337,8.90e-11,23;CL:0000540,1.25e-09,33;CL:0000047,1.25e-09,33;CL:0000031,1.25e-09,33;CL:0000404,1.25e-09,33;CL:0000393,2.28e-07,39;CL:0000211,2.28e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.18e-14!34;UBERON:0001017!4.27e-14!73;UBERON:0005743!4.27e-14!73;UBERON:0001049!1.22e-13!52;UBERON:0005068!1.22e-13!52;UBERON:0006241!1.22e-13!52;UBERON:0007135!1.22e-13!52;UBERON:0000073!4.62e-13!75;UBERON:0001016!4.62e-13!75;UBERON:0000955!6.57e-13!50;UBERON:0006238!6.57e-13!50;UBERON:0002616!2.34e-12!49;UBERON:0002791!6.12e-12!29;UBERON:0003528!6.12e-12!29;UBERON:0001893!6.12e-12!29;UBERON:0000033!2.31e-11!63;UBERON:0003080!1.33e-10!40;UBERON:0002346!4.35e-10!71;UBERON:0003075!4.35e-10!71;UBERON:0007284!4.35e-10!71;UBERON:0002780!4.50e-10!39;UBERON:0001890!4.50e-10!39;UBERON:0006240!4.50e-10!39;UBERON:0003056!8.80e-10!49;UBERON:0004121!1.49e-09!102;UBERON:0000924!1.49e-09!102;UBERON:0006601!1.49e-09!102;UBERON:0000956!2.73e-09!21;UBERON:0001869!2.73e-09!21;UBERON:0000203!2.73e-09!21;UBERON:0002021!1.03e-07!10;UBERON:0000411!1.03e-07!10;UBERON:0001950!1.03e-07!10;UBERON:0002619!2.45e-07!17;UBERON:0000025!9.55e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.35e-20,54;UBERON:0001017,1.46e-19,73;UBERON:0001016,1.78e-18,75;UBERON:0002020,2.60e-18,34;UBERON:0001049,2.69e-18,52;UBERON:0005068,2.69e-18,52;UBERON:0006241,2.69e-18,52;UBERON:0007135,2.69e-18,52;UBERON:0000955,4.20e-15,47;UBERON:0006238,4.20e-15,47;UBERON:0003528,1.05e-14,29;UBERON:0002791,1.05e-14,29;UBERON:0001893,1.05e-14,29;UBERON:0002616,2.21e-14,46;UBERON:0002346,2.33e-14,64;UBERON:0003075,2.33e-14,64;UBERON:0007284,2.33e-14,64;UBERON:0004121,4.08e-13,95;UBERON:0000924,4.08e-13,95;UBERON:0006601,4.08e-13,95;UBERON:0003080,4.39e-13,40;UBERON:0002780,2.20e-12,39;UBERON:0001890,2.20e-12,39;UBERON:0006240,2.20e-12,39;UBERON:0010371,1.01e-11,73;UBERON:0000956,2.72e-11,21;UBERON:0001869,2.72e-11,21;UBERON:0000203,2.72e-11,21;UBERON:0003056,2.47e-10,49;UBERON:0002021,8.21e-10,10;UBERON:0000411,8.21e-10,10;UBERON:0001950,8.21e-10,10;UBERON:0010314,3.61e-09,92;UBERON:0002619,1.04e-08,17;UBERON:0000025,7.25e-08,114;UBERON:0004111,2.47e-07,122 | |||
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| |||
|short_description=p3@Prkce | |||
}} |
Revision as of 15:32, 13 September 2013
Short description: | p3@Prkce |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Prkce_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -167bp_to_ENSMUST00000097275, NM_011104, uc008dug.2_5end |
EntrezGene: | Prkce |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.90e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.90e-11 | 23 |
neuron | 1.25e-09 | 33 |
neuronal stem cell | 1.25e-09 | 33 |
neuroblast | 1.25e-09 | 33 |
electrically signaling cell | 1.25e-09 | 33 |
electrically responsive cell | 2.28e-07 | 39 |
electrically active cell | 2.28e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.