FFCP PHASE1:Mm9::chr17:70871489..70871509,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=224997|HGNC=|MCL_coexpression_id=1|UniProt=D3Z508|association_with_transcript=0bp_to_ENSMUST00000140728_5end|description=CAGE_peak_6_at_Dlgap1_5end|id=chr17:70871489..70871509,+|ontology_enrichment_celltype=CL:0000221!1.01e-10!44;CL:0000133!1.01e-10!44;CL:0000540!2.21e-10!33;CL:0000047!2.21e-10!33;CL:0000031!2.21e-10!33;CL:0000404!2.21e-10!33;CL:0002319!3.70e-10!43;CL:0000117!1.83e-09!23;CL:0000337!1.83e-09!23;CL:0000393!2.09e-07!39;CL:0000211!2.09e-07!39;CL:0000055!2.76e-07!50|ontology_enrichment_celltype_v019_2=CL:0002614,6.79e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.76e-30!73;UBERON:0005743!3.76e-30!73;UBERON:0000073!6.65e-30!75;UBERON:0001016!6.65e-30!75;UBERON:0004121!9.58e-27!102;UBERON:0000924!9.58e-27!102;UBERON:0006601!9.58e-27!102;UBERON:0001049!3.99e-26!52;UBERON:0005068!3.99e-26!52;UBERON:0006241!3.99e-26!52;UBERON:0007135!3.99e-26!52;UBERON:0000033!5.16e-26!63;UBERON:0002346!3.52e-24!71;UBERON:0003075!3.52e-24!71;UBERON:0007284!3.52e-24!71;UBERON:0000955!8.10e-24!50;UBERON:0006238!8.10e-24!50;UBERON:0002616!7.41e-23!49;UBERON:0003056!1.54e-22!49;UBERON:0002020!2.34e-21!34;UBERON:0003080!1.91e-20!40;UBERON:0002780!1.24e-19!39;UBERON:0001890!1.24e-19!39;UBERON:0006240!1.24e-19!39;UBERON:0002791!2.99e-18!29;UBERON:0003528!2.99e-18!29;UBERON:0001893!2.99e-18!29;UBERON:0007811!1.55e-13!86;UBERON:0000956!5.13e-13!21;UBERON:0001869!5.13e-13!21;UBERON:0000203!5.13e-13!21;UBERON:0000153!1.13e-12!94;UBERON:0002619!4.20e-11!17;UBERON:0002021!3.23e-10!10;UBERON:0000411!3.23e-10!10;UBERON:0001950!3.23e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.54e-32,54;UBERON:0001049,4.08e-31,52;UBERON:0005068,4.08e-31,52;UBERON:0006241,4.08e-31,52;UBERON:0007135,4.08e-31,52;UBERON:0000955,2.80e-28,47;UBERON:0006238,2.80e-28,47;UBERON:0001017,1.40e-27,73;UBERON:0001016,1.21e-26,75;UBERON:0002616,2.29e-26,46;UBERON:0002346,8.79e-26,64;UBERON:0003075,8.79e-26,64;UBERON:0007284,8.79e-26,64;UBERON:0002020,3.43e-25,34;UBERON:0002021,1.80e-23,10;UBERON:0000411,1.80e-23,10;UBERON:0001950,1.80e-23,10;UBERON:0010371,2.17e-23,73;UBERON:0003528,2.44e-22,29;UBERON:0002791,2.44e-22,29;UBERON:0001893,2.44e-22,29;UBERON:0004121,2.63e-22,95;UBERON:0000924,2.63e-22,95;UBERON:0006601,2.63e-22,95;UBERON:0003080,4.10e-21,40;UBERON:0002780,1.49e-19,39;UBERON:0001890,1.49e-19,39;UBERON:0006240,1.49e-19,39;UBERON:0002619,2.00e-18,17;UBERON:0003056,6.58e-18,49;UBERON:0000956,4.36e-17,21;UBERON:0001869,4.36e-17,21;UBERON:0000203,4.36e-17,21;UBERON:0010314,4.52e-17,92;UBERON:0000025,1.79e-11,114;UBERON:0004111,3.44e-11,122;UBERON:0003076,1.74e-10,12;UBERON:0003057,1.74e-10,12;UBERON:0002950,7.70e-09,4;UBERON:0001891,7.70e-09,4;UBERON:0009616,7.70e-09,4;UBERON:0010286,7.70e-09,4;UBERON:0002038,6.79e-07,3;UBERON:0009663,6.79e-07,3;UBERON:0009661,6.79e-07,3;UBERON:0000125,6.79e-07,3;UBERON:0002308,6.79e-07,3|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.725827286159344,0.135005938331691,0.630974884054146,1.42825492201902,0.662605622854841,0.367472397644862,0.191690942036473,0,0,4.97980618532232,3.68655679814984,0.659431438650969,0.640413505216868,0.52091337055676,3.07101298901519,1.12552522006336,3.20876320331301,1.47314292736834,1.85083185038834,0.372798891650601,0,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,1.40843419776681,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,28.6925181071316,27.4375185925626,0,0,0,0,4.19413790333504,5.94750783664214,1.38219787324151,23.292458905765,18.6672283851141,4.1557608911912,6.32740925964255,0.712875546952214,0.124406970610093,0.758168275301024,0.420883711772948,0.130120442962704,0,0.360124259610698,0.150704817835715,0.272145996605311,0.512454881139399,0.281105173679186,1.03481348295606,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1363853193356,1.64647379806855,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,2.25415471346161,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.9266070798535,1.99259867206745,0,0,0,0,0.215423397732799,0.477937595905104,0,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,32.4534529586025,0.567760340833074,0.35613120733451,0.81443479676788,2.96946221350564,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,2.56412273974171,0.428736758158132,0,15.8130515932779,21.1749608793301,13.1765968091061,14.6075204992134,28.0883833105963,23.4172108190807,19.5756525067224,24.3173449741079,28.5479717660049,22.2636934053283,0,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,1.01078884705519,0.760437899670719,0.943131706930381,0.561849044819294,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.929621047115796,0,0.749431733813838,0.467863216890817,0.214871054048298,0,0,0.231867835620421|short_description=p6@Dlgap1}} | ||
|EntrezGene=224997 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=D3Z508 | |||
|association_with_transcript=0bp_to_ENSMUST00000140728_5end | |||
|description=CAGE_peak_6_at_Dlgap1_5end | |||
|id=chr17:70871489..70871509,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.01e-10!44;CL:0000133!1.01e-10!44;CL:0000540!2.21e-10!33;CL:0000047!2.21e-10!33;CL:0000031!2.21e-10!33;CL:0000404!2.21e-10!33;CL:0002319!3.70e-10!43;CL:0000117!1.83e-09!23;CL:0000337!1.83e-09!23;CL:0000393!2.09e-07!39;CL:0000211!2.09e-07!39;CL:0000055!2.76e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,6.79e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.76e-30!73;UBERON:0005743!3.76e-30!73;UBERON:0000073!6.65e-30!75;UBERON:0001016!6.65e-30!75;UBERON:0004121!9.58e-27!102;UBERON:0000924!9.58e-27!102;UBERON:0006601!9.58e-27!102;UBERON:0001049!3.99e-26!52;UBERON:0005068!3.99e-26!52;UBERON:0006241!3.99e-26!52;UBERON:0007135!3.99e-26!52;UBERON:0000033!5.16e-26!63;UBERON:0002346!3.52e-24!71;UBERON:0003075!3.52e-24!71;UBERON:0007284!3.52e-24!71;UBERON:0000955!8.10e-24!50;UBERON:0006238!8.10e-24!50;UBERON:0002616!7.41e-23!49;UBERON:0003056!1.54e-22!49;UBERON:0002020!2.34e-21!34;UBERON:0003080!1.91e-20!40;UBERON:0002780!1.24e-19!39;UBERON:0001890!1.24e-19!39;UBERON:0006240!1.24e-19!39;UBERON:0002791!2.99e-18!29;UBERON:0003528!2.99e-18!29;UBERON:0001893!2.99e-18!29;UBERON:0007811!1.55e-13!86;UBERON:0000956!5.13e-13!21;UBERON:0001869!5.13e-13!21;UBERON:0000203!5.13e-13!21;UBERON:0000153!1.13e-12!94;UBERON:0002619!4.20e-11!17;UBERON:0002021!3.23e-10!10;UBERON:0000411!3.23e-10!10;UBERON:0001950!3.23e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.54e-32,54;UBERON:0001049,4.08e-31,52;UBERON:0005068,4.08e-31,52;UBERON:0006241,4.08e-31,52;UBERON:0007135,4.08e-31,52;UBERON:0000955,2.80e-28,47;UBERON:0006238,2.80e-28,47;UBERON:0001017,1.40e-27,73;UBERON:0001016,1.21e-26,75;UBERON:0002616,2.29e-26,46;UBERON:0002346,8.79e-26,64;UBERON:0003075,8.79e-26,64;UBERON:0007284,8.79e-26,64;UBERON:0002020,3.43e-25,34;UBERON:0002021,1.80e-23,10;UBERON:0000411,1.80e-23,10;UBERON:0001950,1.80e-23,10;UBERON:0010371,2.17e-23,73;UBERON:0003528,2.44e-22,29;UBERON:0002791,2.44e-22,29;UBERON:0001893,2.44e-22,29;UBERON:0004121,2.63e-22,95;UBERON:0000924,2.63e-22,95;UBERON:0006601,2.63e-22,95;UBERON:0003080,4.10e-21,40;UBERON:0002780,1.49e-19,39;UBERON:0001890,1.49e-19,39;UBERON:0006240,1.49e-19,39;UBERON:0002619,2.00e-18,17;UBERON:0003056,6.58e-18,49;UBERON:0000956,4.36e-17,21;UBERON:0001869,4.36e-17,21;UBERON:0000203,4.36e-17,21;UBERON:0010314,4.52e-17,92;UBERON:0000025,1.79e-11,114;UBERON:0004111,3.44e-11,122;UBERON:0003076,1.74e-10,12;UBERON:0003057,1.74e-10,12;UBERON:0002950,7.70e-09,4;UBERON:0001891,7.70e-09,4;UBERON:0009616,7.70e-09,4;UBERON:0010286,7.70e-09,4;UBERON:0002038,6.79e-07,3;UBERON:0009663,6.79e-07,3;UBERON:0009661,6.79e-07,3;UBERON:0000125,6.79e-07,3;UBERON:0002308,6.79e-07,3 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.725827286159344,0.135005938331691,0.630974884054146,1.42825492201902,0.662605622854841,0.367472397644862,0.191690942036473,0,0,4.97980618532232,3.68655679814984,0.659431438650969,0.640413505216868,0.52091337055676,3.07101298901519,1.12552522006336,3.20876320331301,1.47314292736834,1.85083185038834,0.372798891650601,0,0.377857800533928,0,0,0,0,0,0,0.280888840263504,0,0,0,1.40843419776681,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0.220841518460394,0,0,28.6925181071316,27.4375185925626,0,0,0,0,4.19413790333504,5.94750783664214,1.38219787324151,23.292458905765,18.6672283851141,4.1557608911912,6.32740925964255,0.712875546952214,0.124406970610093,0.758168275301024,0.420883711772948,0.130120442962704,0,0.360124259610698,0.150704817835715,0.272145996605311,0.512454881139399,0.281105173679186,1.03481348295606,0,0.189106080167819,0.527853372491847,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1363853193356,1.64647379806855,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,2.25415471346161,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,1.9266070798535,1.99259867206745,0,0,0,0,0.215423397732799,0.477937595905104,0,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,32.4534529586025,0.567760340833074,0.35613120733451,0.81443479676788,2.96946221350564,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0.32977250588296,0,0.120625849856312,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,2.56412273974171,0.428736758158132,0,15.8130515932779,21.1749608793301,13.1765968091061,14.6075204992134,28.0883833105963,23.4172108190807,19.5756525067224,24.3173449741079,28.5479717660049,22.2636934053283,0,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,1.01078884705519,0.760437899670719,0.943131706930381,0.561849044819294,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.929621047115796,0,0.749431733813838,0.467863216890817,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p6@Dlgap1 | |||
}} |
Revision as of 15:12, 13 September 2013
Short description: | p6@Dlgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dlgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000140728_5end |
EntrezGene: | Dlgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 6.79e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.