Personal tools

FFCP PHASE1:Mm9::chr17:48572048..48572066,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=11811|HGNC=|MCL_coexpression_id=14|UniProt=Q9WV35|association_with_transcript=0bp_to_ENSMUST00000046549,NM_009694,uc008cxx.1_5end|description=CAGE_peak_1_at_Apobec2_5end|id=chr17:48572048..48572066,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.98e-07!18;UBERON:0000948!3.98e-07!18;UBERON:0005498!3.98e-07!18;UBERON:0004140!3.98e-07!18;UBERON:0009881!3.98e-07!18;UBERON:0004141!3.98e-07!18;UBERON:0003084!3.98e-07!18;UBERON:0007005!3.98e-07!18;UBERON:0004139!3.98e-07!18;UBERON:0004291!3.98e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.60e-07,18;UBERON:0000948,2.60e-07,18;UBERON:0005498,2.60e-07,18;UBERON:0004140,2.60e-07,18;UBERON:0009881,2.60e-07,18;UBERON:0004141,2.60e-07,18;UBERON:0003084,2.60e-07,18;UBERON:0007005,2.60e-07,18;UBERON:0004139,2.60e-07,18;UBERON:0004291,2.60e-07,18;UBERON:0003102,7.81e-07,22|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.934450562382103,0,2.956563165185,0.468129052643987,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,7.56885282344521,0,0,2.3998863419011,2.52350209173887,0,0.430761996159075,0.646413698057667,0,0,1.33038306393183,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,1.34437519656986,0.257259436035947,0.85960031981627,5.15672092277442,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0.299600110518405,1.92109152660777,0.311068836925433,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.287536413054709,0,0,0.127687338085188,0.307213066512487,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,1.42371680799103,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,180.751968709565,0,0,0,1.54927761754349,0,0,0,0.216491041011214,0,0,16.6708464389828,0,1.03909497345377,3.29622120855658,8.52503339273995,8.53277339847416,3.61734337326294,8.70156432804216,0.753999547978053,0,1.73519228303894,31.8459798701955,243.459109170851,226.804239458824,137.219696637268,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0.162241263067758,3.05518091550949,83.3526703087623,0.252722758433675,12.416069497302,1.17108398666433,7.35686734187113,9.54329287968351,20.1944455899858,28.643366142709,20.498195245576,17.4285207681096,20.9549730298603,0,6.61871280587367,8.09375171154165,18.6316372563439,7.22922847986555,70.6951898039998,24.0765099597294,0.199034266818493,0,0,0,82.6431832416653,85.367485833119,97.413575250409,77.4155285363638,87.1665546640999,88.8578570231299,83.0146182758956,83.4330278352816,77.9992487012692,79.811527208038,68.6219999850618,68.016731208973,64.3279944671462,69.8169366625541,101.05743332656,0.210289948564127,0.102904612379284,0.330418782983798,0.793351699990633,0.213288250535234,1.16118335930219,4.38149368495117,1.21010114774006,1.77902435075896,4.1849637744763,0,0.329397909448022,1.00534083520108,1.1937388322469,1.36474860983384,0,0.216138049874694,0.199141273254367,0.379335801906163,2.62771579002376,0,2.03651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.784993639206874,0,0,3.17005700860579,0.982794975566015,0.224862112384854,0.811440485554012,0.72353147925725,2.5462585178142,0.575392274901621,0.810676133875177,3.29473695825698,2.87536413054709,3.34926852901653,4.36852742360385,2.52578877947112,8.61107584905178,0,1.47802552133284,7.76914788258988,4.88894929326078,2.20668611507745,1.40814148973101,3.35012514883632,4.28478553594825,3.51240566144038,6.14777062014145,2.43611158613652,3.98636921643718,31.1340297959902,32.6374615726543,1.73578870297814,0,0,8.35999264132362,0.551873492609465,0.160550589987792,0,0,837.951007391314,0.631016438832513,0.390438744296638,0,0.477937595905104,0,0.283076530788832,1.21443210502468,0,0.395287777946524,0,1.13552068166615,6.7664929393557,8.1443479676788,1.48473110675282,0,0.728341908464944,0.604647113929502,0.188605079755898,6.79194353625777,0,1.55056975900933,0.363533729477506,14.2598951353889,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0.857348140126369,0.709360934569094,0.356737635204141,0.329098041204242,0.913394847343798,0,0.21183207086382,0.220528398054962,77.0018801236712,60.7106244376605,32.5689794612042,15.8765217524172,15.4292445760358,0.582961673259701,4.07935664423121,0.341741761595705,0,1.11116716421827,0.376736914009382,0.546776910884101,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,27.6854479224383,0.158167996790568,2.23651413839534,1.29606408986162,1.88179466413022,2.62035076495413,0.944050424693745,2.64491058321075,60.4656225983108,0.777689839750757,1.24267862617385,0,1.49516546043979,0.330916980914195,0,0,0,0.234714477291508,0.2604087696879,0,0,69.1272015018877,0,0.405450430580328,3.49217254360413,2.33857481360031,2.32734704367726,3.9736270956253,1.32214994471966,3.10148007066612,2.52416124870369,0.609654453239999,0.604957110821043,1.46186821109629,0.577271049841977,0.233753804363138,104.976167613843,0,0.0897138566094757,0,0,0.187682475451182,71.2459818399661,6.43105137237198,0,0,0,0,0,0,0,0,0,0,0,4.25528125095124,3.19219898720825,9.56108192223151,44.7316359405661,35.843850809385,50.5569648237539,139.793191787216,134.540892376998,146.018240364276,145.806291187711,130.795318743364,153.730468229652,158.347789131571,154.876843667379,165.873634343811,135.267408324393,136.51173596304,157.799742339311,124.449942042599,133.509420561898,124.461538615906,126.185298179289,136.862373029762,155.520665796592,143.516805133379,154.167815578635,143.415530732254,128.378019181667,157.940184402737,118.962161591441,145.80243727461,154.75054181201,95.7600641017073,148.274557014969,84.8789088317022,71.9454464461284,111.351445620014,110.013979672729,288.845381423953,161.914101633724,182.943722304513|short_description=p1@Apobec2}}
|EntrezGene=11811
|HGNC=
|MCL_coexpression_id=14
|UniProt=Q9WV35
|association_with_transcript=0bp_to_ENSMUST00000046549,NM_009694,uc008cxx.1_5end
|description=CAGE_peak_1_at_Apobec2_5end
|id=chr17:48572048..48572066,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!3.98e-07!18;UBERON:0000948!3.98e-07!18;UBERON:0005498!3.98e-07!18;UBERON:0004140!3.98e-07!18;UBERON:0009881!3.98e-07!18;UBERON:0004141!3.98e-07!18;UBERON:0003084!3.98e-07!18;UBERON:0007005!3.98e-07!18;UBERON:0004139!3.98e-07!18;UBERON:0004291!3.98e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.60e-07,18;UBERON:0000948,2.60e-07,18;UBERON:0005498,2.60e-07,18;UBERON:0004140,2.60e-07,18;UBERON:0009881,2.60e-07,18;UBERON:0004141,2.60e-07,18;UBERON:0003084,2.60e-07,18;UBERON:0007005,2.60e-07,18;UBERON:0004139,2.60e-07,18;UBERON:0004291,2.60e-07,18;UBERON:0003102,7.81e-07,22
|phase1_expression=0.80074423552397,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.934450562382103,0,2.956563165185,0.468129052643987,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,7.56885282344521,0,0,2.3998863419011,2.52350209173887,0,0.430761996159075,0.646413698057667,0,0,1.33038306393183,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,1.34437519656986,0.257259436035947,0.85960031981627,5.15672092277442,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0.299600110518405,1.92109152660777,0.311068836925433,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.287536413054709,0,0,0.127687338085188,0.307213066512487,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,1.42371680799103,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,180.751968709565,0,0,0,1.54927761754349,0,0,0,0.216491041011214,0,0,16.6708464389828,0,1.03909497345377,3.29622120855658,8.52503339273995,8.53277339847416,3.61734337326294,8.70156432804216,0.753999547978053,0,1.73519228303894,31.8459798701955,243.459109170851,226.804239458824,137.219696637268,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0.162241263067758,3.05518091550949,83.3526703087623,0.252722758433675,12.416069497302,1.17108398666433,7.35686734187113,9.54329287968351,20.1944455899858,28.643366142709,20.498195245576,17.4285207681096,20.9549730298603,0,6.61871280587367,8.09375171154165,18.6316372563439,7.22922847986555,70.6951898039998,24.0765099597294,0.199034266818493,0,0,0,82.6431832416653,85.367485833119,97.413575250409,77.4155285363638,87.1665546640999,88.8578570231299,83.0146182758956,83.4330278352816,77.9992487012692,79.811527208038,68.6219999850618,68.016731208973,64.3279944671462,69.8169366625541,101.05743332656,0.210289948564127,0.102904612379284,0.330418782983798,0.793351699990633,0.213288250535234,1.16118335930219,4.38149368495117,1.21010114774006,1.77902435075896,4.1849637744763,0,0.329397909448022,1.00534083520108,1.1937388322469,1.36474860983384,0,0.216138049874694,0.199141273254367,0.379335801906163,2.62771579002376,0,2.03651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.784993639206874,0,0,3.17005700860579,0.982794975566015,0.224862112384854,0.811440485554012,0.72353147925725,2.5462585178142,0.575392274901621,0.810676133875177,3.29473695825698,2.87536413054709,3.34926852901653,4.36852742360385,2.52578877947112,8.61107584905178,0,1.47802552133284,7.76914788258988,4.88894929326078,2.20668611507745,1.40814148973101,3.35012514883632,4.28478553594825,3.51240566144038,6.14777062014145,2.43611158613652,3.98636921643718,31.1340297959902,32.6374615726543,1.73578870297814,0,0,8.35999264132362,0.551873492609465,0.160550589987792,0,0,837.951007391314,0.631016438832513,0.390438744296638,0,0.477937595905104,0,0.283076530788832,1.21443210502468,0,0.395287777946524,0,1.13552068166615,6.7664929393557,8.1443479676788,1.48473110675282,0,0.728341908464944,0.604647113929502,0.188605079755898,6.79194353625777,0,1.55056975900933,0.363533729477506,14.2598951353889,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0.857348140126369,0.709360934569094,0.356737635204141,0.329098041204242,0.913394847343798,0,0.21183207086382,0.220528398054962,77.0018801236712,60.7106244376605,32.5689794612042,15.8765217524172,15.4292445760358,0.582961673259701,4.07935664423121,0.341741761595705,0,1.11116716421827,0.376736914009382,0.546776910884101,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,27.6854479224383,0.158167996790568,2.23651413839534,1.29606408986162,1.88179466413022,2.62035076495413,0.944050424693745,2.64491058321075,60.4656225983108,0.777689839750757,1.24267862617385,0,1.49516546043979,0.330916980914195,0,0,0,0.234714477291508,0.2604087696879,0,0,69.1272015018877,0,0.405450430580328,3.49217254360413,2.33857481360031,2.32734704367726,3.9736270956253,1.32214994471966,3.10148007066612,2.52416124870369,0.609654453239999,0.604957110821043,1.46186821109629,0.577271049841977,0.233753804363138,104.976167613843,0,0.0897138566094757,0,0,0.187682475451182,71.2459818399661,6.43105137237198,0,0,0,0,0,0,0,0,0,0,0,4.25528125095124,3.19219898720825,9.56108192223151,44.7316359405661,35.843850809385,50.5569648237539,139.793191787216,134.540892376998,146.018240364276,145.806291187711,130.795318743364,153.730468229652,158.347789131571,154.876843667379,165.873634343811,135.267408324393,136.51173596304,157.799742339311,124.449942042599,133.509420561898,124.461538615906,126.185298179289,136.862373029762,155.520665796592,143.516805133379,154.167815578635,143.415530732254,128.378019181667,157.940184402737,118.962161591441,145.80243727461,154.75054181201,95.7600641017073,148.274557014969,84.8789088317022,71.9454464461284,111.351445620014,110.013979672729,288.845381423953,161.914101633724,182.943722304513
|short_description=p1@Apobec2
}}

Revision as of 14:47, 13 September 2013

Short description:p1@Apobec2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apobec2_5end
Coexpression cluster:MCL_coexpression_mm9:14
Association with transcript: 0bp_to_ENSMUST00000046549, NM_009694, uc008cxx.1_5end
EntrezGene:Apobec2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apobec2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7180.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.67
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C18.70
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G231.85
bone (os femoris), neonate N02.CNhs11227.1985-43F5243.46
bone (os femoris), neonate N16.CNhs11225.1525-43A6226.80
bone (os femoris), neonate N20.CNhs11195.1350-25C3137.22
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A283.35
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G412.42
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C99.54
eyeball, embryo E17.CNhs11023.1261-18D420.19
eyeball, neonate N00.CNhs11207.633-15C628.64
eyeball, neonate N01.CNhs11140.1532-43E720.50
eyeball, neonate N02.CNhs11205.1551-44G817.43
eyeball, neonate N16.CNhs11188.777-19A220.95
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H26.62
forelimb, embryo E13.CNhs10589.384-1E28.09
forelimb, embryo E14.CNhs10577.413-26A818.63
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C470.70
forelimb, embryo E18.CNhs11008.1520-43B524.08
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E982.64
heart, embryo E12.CNhs11015.353-12F585.37
heart, embryo E13.CNhs11013.376-3I997.41
heart, embryo E14.CNhs10597.403-26D477.42
heart, embryo E15.CNhs11017.431-16C887.17
heart, embryo E16.CNhs11021.457-17C688.86
heart, embryo E17.CNhs11025.479-18E583.01
heart, embryo E18.CNhs11030.1283-20G383.43
heart, neonate N00.CNhs11213.639-21E378.00
heart, neonate N03.CNhs11221.1349-25I279.81
heart, neonate N10.CNhs11118.749-24G168.62
heart, neonate N16.CNhs11209.782-15G168.02
heart, neonate N20.CNhs11127.821-26I664.33
heart, neonate N25.CNhs11196.1351-25D369.82
heart, neonate N30.CNhs11202.1390-42D2101.06
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H18.61
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G27.77
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A431.13
lung, neonate N25.CNhs11119.1359-25C732.64
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2837.95
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D814.26
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C377.00
skin, neonate N00.CNhs11124.650-25G460.71
skin, neonate N03.CNhs11215.662-22H332.57
skin, neonate N06.CNhs11097.693-20I515.88
skin, neonate N10.CNhs11108.762-6C415.43
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E460.47
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E269.13
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I23.49
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B4104.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E571.25
vagina, adult.CNhs10502.89-27D56.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.26
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H29.56
whole body, embryo E14.5.CNhs10578.420-27D244.73
whole body, embryo E14.CNhs10519.395-14B135.84
whole body, embryo E16.CNhs10514.453-14F250.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5139.79
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5134.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5146.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5145.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5130.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5153.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5158.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5154.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5165.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5135.27
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5136.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5157.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5124.45
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5133.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5124.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5126.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5136.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5155.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5143.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5154.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5143.42
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5128.38
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5157.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5118.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5145.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5154.75
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G595.76
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5148.27
whole body, embryo E17.5.CNhs10513.490-9F984.88
whole body, embryo E17.CNhs10517.475-3I571.95
whole body, embryo E18.CNhs10516.493-3B3111.35
whole body, neonate N00.CNhs10525.657-19C2110.01
whole body, neonate N01.CNhs10576.659-23C6288.85
whole body, neonate N06.CNhs10515.692-21D1161.91
whole body, neonate N10.CNhs10518.761-6B4182.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primary circulatory organ2.60e-0718
heart2.60e-0718
primitive heart tube2.60e-0718
primary heart field2.60e-0718
anterior lateral plate mesoderm2.60e-0718
heart tube2.60e-0718
heart primordium2.60e-0718
cardiac mesoderm2.60e-0718
cardiogenic plate2.60e-0718
heart rudiment2.60e-0718
surface structure7.81e-0722







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:48572048..48572066,-&oldid=2945447"