FFCP PHASE1:Mm9::chr17:47730501..47730522,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12445|HGNC=|MCL_coexpression_id=2216|UniProt=P30282,Q3TSW4,Q3TWY0|association_with_transcript=85bp_to_ENSMUST00000037333,NM_007632,uc008cvo.1,uc008cvp.1_5end|description=CAGE_peak_3_at_Ccnd3_5end|id=chr17:47730501..47730522,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!9.09e-08!193;UBERON:0004120!9.09e-08!193;UBERON:0006603!9.09e-08!193|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.28e-08,120;UBERON:0004120,3.28e-08,120;UBERON:0006603,3.28e-08,120|phase1_expression=4.64431656603902,1.04692622291808,0.454999239389536,0.60492842261366,0.500895729946347,1.84667199103079,1.16806320297763,4.00282302668886,8.16574588479667,12.1713553687437,0.34243593645101,1.11681022593471,3.25281386869291,5.15780374272085,10.9926221399169,14.3757439846776,33.578970150151,1.89277299214943,3.01651753932625,1.69755860719212,3.57181818634493,5.36171136484781,5.22399578277871,0.639969691173627,1.14704640533585,0.57423196411502,0.86152399231815,0.430942465371778,0,1.00812051903972,0.221730510655305,10.7955214488137,11.0711661765223,15.8481681015439,0,1.16364251750945,0.816677425049476,66.9650609179052,56.2561448057136,42.4054232618777,63.5290007073495,66.9384575259277,71.3700218955796,10.0717454380462,8.71841608487825,4.22157529971868,82.9334825008922,17.0059621976748,15.817405156882,20.609569301874,27.2973522169457,20.125359011096,0.671130424230945,3.62681071005672,3.36093799142464,5.65970759279083,5.73066879877513,8.76642556871652,1.82084814773638,2.11596391708813,1.90149421051854,42.0167219765724,35.5717918444456,2.6996991518442,0.988866362566974,4.9733608046227,18.5752068521411,19.9793518767208,2.17748185847803,2.43010688997043,1.89292465216244,2.57085885963423,3.09215957332259,1.10241719293459,1.43768206527355,0.919218786610021,3.30347642998166,1.27687338085188,1.0752457327937,1.84640802822271,2.28719109006024,0.52091337055676,1.11673199600552,0.56276261003168,1.37518422999129,4.41942878210502,2.56269025438385,2.98239113320481,1.59025005999687,1.73814588245607,5.50742528533188,1.72084775396277,0,1.07940638327563,0.649776417447669,1.34408066129201,4.91555470461132,2.72688516124892,2.33807404142582,4.59341446863442,6.19711047017394,1.28326477414318,7.64415719119937,0,2.59789249213457,2.53359865475099,1.51657333504435,3.9964357901671,4.14300613835475,15.289540323677,17.6955033301459,27.7063585264048,20.7553947530453,16.2780451796832,10.8181610564848,22.2429866653526,1.73036477414062,3.18118585223806,20.3460426948471,13.9119490954772,12.1462835153216,11.6370060752453,7.45567044872489,1.75668478206928,1.04723353406728,2.04365644166873,8.02761334189666,4.19931911695385,7.24300294316469,1.9472783122627,0.457500602818626,1.25654352112864,1.91206752211504,0.511430914660661,2.0778804455956,0.973447578406546,23.830411140974,9.82815067819735,0.758168275301024,0.841767423545896,10.9301172088671,8.27647575960503,7.38254732201932,9.19299388797862,5.91917542616552,8.07116437794554,4.68508622798644,4.39795730256327,6.03590380211958,7.37513712654495,10.0292140773451,13.3709396780821,18.9072129473407,13.9300866608867,15.6394423670037,9.95171334092466,1.40442637462647,3.3455227924913,6.53576048609863,16.3629360303046,20.1692411583743,16.9258337773354,12.3107262504309,19.0861304794982,17.7407179820485,14.6496385192757,9.92611585178591,6.42209383019432,8.55711219550098,5.25335885053105,3.16168357228837,2.77779976108131,2.85415149878366,4.16039898157152,2.73376933133365,3.19004298375782,1.32167513193519,1.85115396664481,15.1434657880016,15.0953836709285,11.3403365963442,9.27744213267376,7.56085349072559,8.17970192284004,3.32170343081158,7.90554982675252,4.02136334080431,6.76452004939913,7.40863531052657,0.898819408654221,0.648414149624083,0.995706366271836,10.6214024533726,9.82537208443668,4.50830942692322,7.53509913027663,6.0125271021964,5.26018649177389,5.56481526693464,3.54264355151045,2.66897837330337,3.70191491765402,0.889357881261447,16.1839752544611,16.3143965943958,17.0895205412489,20.0831520174618,17.364755502174,15.5321769586666,13.8094145976389,14.2678999562031,12.6298250066517,7.18841032636773,10.0478055870496,8.42501717409313,2.52578877947112,2.15276896226295,4.82443521363367,5.54259570499814,8.7166049414423,5.86673915191293,8.99648954608497,7.97946844180907,7.53778158488171,6.42717830392237,5.46374214001837,10.8768249433272,8.63712289630222,7.01600982092943,5.73521601505083,7.9435091658312,5.49666422609744,1.50791283939272,5.98296252200581,2.45882136509518,1.65562047782839,1.76605648986571,1.17211686592203,5.90165803356032,2.7771801992481,5.67914794949262,2.73307121007647,5.81643173878557,5.4962823529087,3.7875774594007,4.81230102341015,3.64329631507405,5.55286130031493,5.13874111330481,2.89189184779626,3.83238230062325,27.6001685684246,16.7773568134183,5.1140738121486,1.32745138339963,16.9946445308487,13.302236506449,9.05304382828311,10.0402643579463,11.0676653259814,10.3371317267288,6.1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| ||
|EntrezGene=12445 | |||
|HGNC= | |||
|MCL_coexpression_id=2216 | |||
|UniProt=P30282,Q3TSW4,Q3TWY0 | |||
|association_with_transcript=85bp_to_ENSMUST00000037333,NM_007632,uc008cvo.1,uc008cvp.1_5end | |||
|description=CAGE_peak_3_at_Ccnd3_5end | |||
|id=chr17:47730501..47730522,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.09e-08!193;UBERON:0004120!9.09e-08!193;UBERON:0006603!9.09e-08!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.28e-08,120;UBERON:0004120,3.28e-08,120;UBERON:0006603,3.28e-08,120 | |||
|phase1_expression=4.64431656603902,1.04692622291808,0.454999239389536,0.60492842261366,0.500895729946347,1.84667199103079,1.16806320297763,4.00282302668886,8.16574588479667,12.1713553687437,0.34243593645101,1.11681022593471,3.25281386869291,5.15780374272085,10.9926221399169,14.3757439846776,33.578970150151,1.89277299214943,3.01651753932625,1.69755860719212,3.57181818634493,5.36171136484781,5.22399578277871,0.639969691173627,1.14704640533585,0.57423196411502,0.86152399231815,0.430942465371778,0,1.00812051903972,0.221730510655305,10.7955214488137,11.0711661765223,15.8481681015439,0,1.16364251750945,0.816677425049476,66.9650609179052,56.2561448057136,42.4054232618777,63.5290007073495,66.9384575259277,71.3700218955796,10.0717454380462,8.71841608487825,4.22157529971868,82.9334825008922,17.0059621976748,15.817405156882,20.609569301874,27.2973522169457,20.125359011096,0.671130424230945,3.62681071005672,3.36093799142464,5.65970759279083,5.73066879877513,8.76642556871652,1.82084814773638,2.11596391708813,1.90149421051854,42.0167219765724,35.5717918444456,2.6996991518442,0.988866362566974,4.9733608046227,18.5752068521411,19.9793518767208,2.17748185847803,2.43010688997043,1.89292465216244,2.57085885963423,3.09215957332259,1.10241719293459,1.43768206527355,0.919218786610021,3.30347642998166,1.27687338085188,1.0752457327937,1.84640802822271,2.28719109006024,0.52091337055676,1.11673199600552,0.56276261003168,1.37518422999129,4.41942878210502,2.56269025438385,2.98239113320481,1.59025005999687,1.73814588245607,5.50742528533188,1.72084775396277,0,1.07940638327563,0.649776417447669,1.34408066129201,4.91555470461132,2.72688516124892,2.33807404142582,4.59341446863442,6.19711047017394,1.28326477414318,7.64415719119937,0,2.59789249213457,2.53359865475099,1.51657333504435,3.9964357901671,4.14300613835475,15.289540323677,17.6955033301459,27.7063585264048,20.7553947530453,16.2780451796832,10.8181610564848,22.2429866653526,1.73036477414062,3.18118585223806,20.3460426948471,13.9119490954772,12.1462835153216,11.6370060752453,7.45567044872489,1.75668478206928,1.04723353406728,2.04365644166873,8.02761334189666,4.19931911695385,7.24300294316469,1.9472783122627,0.457500602818626,1.25654352112864,1.91206752211504,0.511430914660661,2.0778804455956,0.973447578406546,23.830411140974,9.82815067819735,0.758168275301024,0.841767423545896,10.9301172088671,8.27647575960503,7.38254732201932,9.19299388797862,5.91917542616552,8.07116437794554,4.68508622798644,4.39795730256327,6.03590380211958,7.37513712654495,10.0292140773451,13.3709396780821,18.9072129473407,13.9300866608867,15.6394423670037,9.95171334092466,1.40442637462647,3.3455227924913,6.53576048609863,16.3629360303046,20.1692411583743,16.9258337773354,12.3107262504309,19.0861304794982,17.7407179820485,14.6496385192757,9.92611585178591,6.42209383019432,8.55711219550098,5.25335885053105,3.16168357228837,2.77779976108131,2.85415149878366,4.16039898157152,2.73376933133365,3.19004298375782,1.32167513193519,1.85115396664481,15.1434657880016,15.0953836709285,11.3403365963442,9.27744213267376,7.56085349072559,8.17970192284004,3.32170343081158,7.90554982675252,4.02136334080431,6.76452004939913,7.40863531052657,0.898819408654221,0.648414149624083,0.995706366271836,10.6214024533726,9.82537208443668,4.50830942692322,7.53509913027663,6.0125271021964,5.26018649177389,5.56481526693464,3.54264355151045,2.66897837330337,3.70191491765402,0.889357881261447,16.1839752544611,16.3143965943958,17.0895205412489,20.0831520174618,17.364755502174,15.5321769586666,13.8094145976389,14.2678999562031,12.6298250066517,7.18841032636773,10.0478055870496,8.42501717409313,2.52578877947112,2.15276896226295,4.82443521363367,5.54259570499814,8.7166049414423,5.86673915191293,8.99648954608497,7.97946844180907,7.53778158488171,6.42717830392237,5.46374214001837,10.8768249433272,8.63712289630222,7.01600982092943,5.73521601505083,7.9435091658312,5.49666422609744,1.50791283939272,5.98296252200581,2.45882136509518,1.65562047782839,1.76605648986571,1.17211686592203,5.90165803356032,2.7771801992481,5.67914794949262,2.73307121007647,5.81643173878557,5.4962823529087,3.7875774594007,4.81230102341015,3.64329631507405,5.55286130031493,5.13874111330481,2.89189184779626,3.83238230062325,27.6001685684246,16.7773568134183,5.1140738121486,1.32745138339963,16.9946445308487,13.302236506449,9.05304382828311,10.0402643579463,11.0676653259814,10.3371317267288,6.18007340111759,7.12994756769443,5.68866164284469,1.05418608574999,3.09406629744561,8.17055053809091,9.54323798365944,11.9009989080134,16.5039516974326,8.33499098118686,13.7343989553594,12.5057255657612,10.656273219011,6.10146440965647,2.54198485036584,1.98475558249466,0.98931751764888,10.172258881842,8.2025577902292,5.84924485615369,3.61109979439135,1.45740418314925,1.8542530201051,18.1123133645724,19.6067524565061,14.0747840800981,25.618110152638,29.2525647322994,17.3871411636957,5.60928818979723,7.69732987780119,7.87739850685216,2.86401185404534,14.2351197111511,12.1991680276109,14.148699647656,1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| |||
|short_description=p3@Ccnd3 | |||
}} | |||
Revision as of 14:44, 13 September 2013
| Short description: | p3@Ccnd3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Ccnd3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2216 |
| Association with transcript: | 85bp_to_ENSMUST00000037333, NM_007632, uc008cvo.1, uc008cvp.1_5end |
| EntrezGene: | Ccnd3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 3.28e-08 | 120 |
| mesoderm-derived structure | 3.28e-08 | 120 |
| presumptive mesoderm | 3.28e-08 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
