FFCP PHASE1:Mm9::chr17:43938737..43938766,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53901|HGNC=|MCL_coexpression_id=405|UniProt=Q8VIP4,Q9JHG2,Q543P2|association_with_transcript=-33bp_to_ENSMUST00000044895,NM_207649,uc008cpo.1_5end|description=CAGE_peak_4_at_Rcan2_5end|id=chr17:43938737..43938766,+|ontology_enrichment_celltype=CL:0000117!1.80e-09!23;CL:0000337!1.80e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-12,23;CL:0000337,7.31e-12,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.04e-18!73;UBERON:0005743!1.04e-18!73;UBERON:0000073!6.87e-18!75;UBERON:0001016!6.87e-18!75;UBERON:0001049!3.06e-17!52;UBERON:0005068!3.06e-17!52;UBERON:0006241!3.06e-17!52;UBERON:0007135!3.06e-17!52;UBERON:0002346!1.01e-16!71;UBERON:0003075!1.01e-16!71;UBERON:0007284!1.01e-16!71;UBERON:0000955!1.20e-16!50;UBERON:0006238!1.20e-16!50;UBERON:0000033!1.85e-16!63;UBERON:0002616!4.03e-16!49;UBERON:0002020!3.81e-15!34;UBERON:0004121!5.11e-15!102;UBERON:0000924!5.11e-15!102;UBERON:0006601!5.11e-15!102;UBERON:0003056!2.54e-14!49;UBERON:0000025!3.10e-14!114;UBERON:0003080!2.90e-13!40;UBERON:0004111!8.69e-13!122;UBERON:0002791!1.07e-12!29;UBERON:0003528!1.07e-12!29;UBERON:0001893!1.07e-12!29;UBERON:0002780!1.21e-12!39;UBERON:0001890!1.21e-12!39;UBERON:0006240!1.21e-12!39;UBERON:0002619!1.69e-09!17;UBERON:0000956!2.45e-08!21;UBERON:0001869!2.45e-08!21;UBERON:0000203!2.45e-08!21;UBERON:0002021!4.90e-08!10;UBERON:0000411!4.90e-08!10;UBERON:0001950!4.90e-08!10;UBERON:0003103!6.64e-08!43;UBERON:0000468!1.50e-07!333;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.06e-25,92;UBERON:0000073,2.99e-24,54;UBERON:0001049,2.55e-22,52;UBERON:0005068,2.55e-22,52;UBERON:0006241,2.55e-22,52;UBERON:0007135,2.55e-22,52;UBERON:0001017,1.26e-20,73;UBERON:0002020,1.46e-19,34;UBERON:0001016,1.55e-19,75;UBERON:0002346,1.60e-19,64;UBERON:0003075,1.60e-19,64;UBERON:0007284,1.60e-19,64;UBERON:0000955,5.20e-19,47;UBERON:0006238,5.20e-19,47;UBERON:0002616,2.55e-18,46;UBERON:0003080,1.84e-16,40;UBERON:0003528,3.13e-16,29;UBERON:0002791,3.13e-16,29;UBERON:0001893,3.13e-16,29;UBERON:0004121,1.19e-15,95;UBERON:0000924,1.19e-15,95;UBERON:0006601,1.19e-15,95;UBERON:0002780,1.25e-15,39;UBERON:0001890,1.25e-15,39;UBERON:0006240,1.25e-15,39;UBERON:0003056,1.43e-15,49;UBERON:0010371,6.76e-15,73;UBERON:0000025,1.56e-14,114;UBERON:0004111,2.32e-13,122;UBERON:0002619,2.16e-12,17;UBERON:0002021,2.12e-10,10;UBERON:0000411,2.12e-10,10;UBERON:0001950,2.12e-10,10;UBERON:0000956,2.46e-10,21;UBERON:0001869,2.46e-10,21;UBERON:0000203,2.46e-10,21;UBERON:0007100,7.42e-10,18;UBERON:0000948,7.42e-10,18;UBERON:0005498,7.42e-10,18;UBERON:0004140,7.42e-10,18;UBERON:0009881,7.42e-10,18;UBERON:0004141,7.42e-10,18;UBERON:0003084,7.42e-10,18;UBERON:0007005,7.42e-10,18;UBERON:0004139,7.42e-10,18;UBERON:0004291,7.42e-10,18;UBERON:0003103,2.24e-08,43;UBERON:0004535,2.97e-08,23;UBERON:0001009,2.97e-08,23;UBERON:0002420,2.17e-07,8;UBERON:0007245,2.17e-07,8;UBERON:0010009,2.17e-07,8;UBERON:0010011,2.17e-07,8;UBERON:0000454,2.17e-07,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0,4.14247797122848,1.97717564461025,4.27745777963423,1.25987779462826,1.43752564364972,0,0,0,0,0.286533439938757,1.54701627683233,7.28339259094552,11.1088105647127,9.50747105259269,0,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0.311068836925433,0.135005938331691,0.420649922702764,5.14171771926846,3.53389665522582,1.46988959057945,1.72521847832825,1.83843757322004,9.91042928994498,10.3426743849002,8.1411462625809,12.5291973343684,11.0700048758916,9.89735404057844,4.18774498502071,4.50210088025344,7.94550888439413,5.30331453852602,6.83384067835694,7.26957838718672,0.151452386666368,0.302286240427142,1.15945795480671,0,0,0,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.45673551887624,0,0.890652834388949,0.173485326766136,1.21786191324856,0.691846491768175,0.301445281105245,0.940709657085638,0.251333182659351,0,2.89198713839823,0.884610551949874,0.970601099684455,0.441683036920787,0,0,2.63502717310392,1.25668024088073,0.255457055208591,0,0,0,10.7849260371472,11.4375150704657,3.01570445070875,9.73416193076748,10.2286182932132,8.10373373782284,7.62533936418461,2.03678727700633,0.995255764880744,0.505445516867349,1.47309299120532,0.780722657776222,0.689706313300419,0.720248519221397,0.753524089178575,1.42876648217788,1.66547836370305,1.59292931751539,2.32833033665114,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,3.10688658803253,4.69052119962192,5.04173772090842,7.8125762743119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| ||
|EntrezGene=53901 | |||
|HGNC= | |||
|MCL_coexpression_id=405 | |||
|UniProt=Q8VIP4,Q9JHG2,Q543P2 | |||
|association_with_transcript=-33bp_to_ENSMUST00000044895,NM_207649,uc008cpo.1_5end | |||
|description=CAGE_peak_4_at_Rcan2_5end | |||
|id=chr17:43938737..43938766,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.80e-09!23;CL:0000337!1.80e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-12,23;CL:0000337,7.31e-12,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.04e-18!73;UBERON:0005743!1.04e-18!73;UBERON:0000073!6.87e-18!75;UBERON:0001016!6.87e-18!75;UBERON:0001049!3.06e-17!52;UBERON:0005068!3.06e-17!52;UBERON:0006241!3.06e-17!52;UBERON:0007135!3.06e-17!52;UBERON:0002346!1.01e-16!71;UBERON:0003075!1.01e-16!71;UBERON:0007284!1.01e-16!71;UBERON:0000955!1.20e-16!50;UBERON:0006238!1.20e-16!50;UBERON:0000033!1.85e-16!63;UBERON:0002616!4.03e-16!49;UBERON:0002020!3.81e-15!34;UBERON:0004121!5.11e-15!102;UBERON:0000924!5.11e-15!102;UBERON:0006601!5.11e-15!102;UBERON:0003056!2.54e-14!49;UBERON:0000025!3.10e-14!114;UBERON:0003080!2.90e-13!40;UBERON:0004111!8.69e-13!122;UBERON:0002791!1.07e-12!29;UBERON:0003528!1.07e-12!29;UBERON:0001893!1.07e-12!29;UBERON:0002780!1.21e-12!39;UBERON:0001890!1.21e-12!39;UBERON:0006240!1.21e-12!39;UBERON:0002619!1.69e-09!17;UBERON:0000956!2.45e-08!21;UBERON:0001869!2.45e-08!21;UBERON:0000203!2.45e-08!21;UBERON:0002021!4.90e-08!10;UBERON:0000411!4.90e-08!10;UBERON:0001950!4.90e-08!10;UBERON:0003103!6.64e-08!43;UBERON:0000468!1.50e-07!333;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.06e-25,92;UBERON:0000073,2.99e-24,54;UBERON:0001049,2.55e-22,52;UBERON:0005068,2.55e-22,52;UBERON:0006241,2.55e-22,52;UBERON:0007135,2.55e-22,52;UBERON:0001017,1.26e-20,73;UBERON:0002020,1.46e-19,34;UBERON:0001016,1.55e-19,75;UBERON:0002346,1.60e-19,64;UBERON:0003075,1.60e-19,64;UBERON:0007284,1.60e-19,64;UBERON:0000955,5.20e-19,47;UBERON:0006238,5.20e-19,47;UBERON:0002616,2.55e-18,46;UBERON:0003080,1.84e-16,40;UBERON:0003528,3.13e-16,29;UBERON:0002791,3.13e-16,29;UBERON:0001893,3.13e-16,29;UBERON:0004121,1.19e-15,95;UBERON:0000924,1.19e-15,95;UBERON:0006601,1.19e-15,95;UBERON:0002780,1.25e-15,39;UBERON:0001890,1.25e-15,39;UBERON:0006240,1.25e-15,39;UBERON:0003056,1.43e-15,49;UBERON:0010371,6.76e-15,73;UBERON:0000025,1.56e-14,114;UBERON:0004111,2.32e-13,122;UBERON:0002619,2.16e-12,17;UBERON:0002021,2.12e-10,10;UBERON:0000411,2.12e-10,10;UBERON:0001950,2.12e-10,10;UBERON:0000956,2.46e-10,21;UBERON:0001869,2.46e-10,21;UBERON:0000203,2.46e-10,21;UBERON:0007100,7.42e-10,18;UBERON:0000948,7.42e-10,18;UBERON:0005498,7.42e-10,18;UBERON:0004140,7.42e-10,18;UBERON:0009881,7.42e-10,18;UBERON:0004141,7.42e-10,18;UBERON:0003084,7.42e-10,18;UBERON:0007005,7.42e-10,18;UBERON:0004139,7.42e-10,18;UBERON:0004291,7.42e-10,18;UBERON:0003103,2.24e-08,43;UBERON:0004535,2.97e-08,23;UBERON:0001009,2.97e-08,23;UBERON:0002420,2.17e-07,8;UBERON:0007245,2.17e-07,8;UBERON:0010009,2.17e-07,8;UBERON:0010011,2.17e-07,8;UBERON:0000454,2.17e-07,8 | |||
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|short_description=p4@Rcan2 | |||
}} |
Revision as of 14:34, 13 September 2013
Short description: | p4@Rcan2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rcan2_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | -33bp_to_ENSMUST00000044895, NM_207649, uc008cpo.1_5end |
EntrezGene: | Rcan2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.31e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.31e-12 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.