FFCP PHASE1:Hg19::chr5:160975364..160975379,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2561|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4082|TSSclassifier=S|UniProt=P47870|association_with_transcript=-131bp_to_ENST00000353437_5end|coexpression_cluster_id=C118|description=CAGE_peak_5_at_GABRB2_5end|id=chr5:160975364..160975379,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;1.47e-08;1|ontology_enrichment_celltype_v019_2=CL:0002553,1.84e-08,1|ontology_enrichment_development_v019=UBERON:0006215;2.49e-23;3!UBERON:0006601;2.12e-13;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.21e-64!57;UBERON:0005068!4.21e-64!57;UBERON:0006241!4.21e-64!57;UBERON:0007135!4.21e-64!57;UBERON:0002780!3.85e-62!41;UBERON:0001890!3.85e-62!41;UBERON:0006240!3.85e-62!41;UBERON:0002616!1.48e-61!59;UBERON:0003080!1.88e-60!42;UBERON:0001893!6.16e-59!34;UBERON:0001017!3.39e-58!82;UBERON:0005743!1.65e-57!86;UBERON:0002791!1.93e-56!33;UBERON:0000955!5.66e-56!69;UBERON:0006238!5.66e-56!69;UBERON:0001869!6.58e-55!32;UBERON:0002020!2.29e-54!34;UBERON:0003528!2.29e-54!34;UBERON:0007023!2.31e-54!115;UBERON:0000073!4.15e-53!94;UBERON:0001016!4.15e-53!94;UBERON:0003075!6.96e-48!86;UBERON:0007284!6.96e-48!86;UBERON:0001950!1.26e-46!20;UBERON:0002619!4.35e-46!22;UBERON:0002346!3.33e-45!90;UBERON:0000956!9.47e-44!25;UBERON:0000203!9.47e-44!25;UBERON:0003056!2.66e-41!61;UBERON:0000033!1.50e-29!123;UBERON:0000153!5.13e-29!129;UBERON:0007811!5.13e-29!129;UBERON:0004121!4.27e-25!169;UBERON:0000924!3.28e-24!173;UBERON:0006601!3.28e-24!173;UBERON:0002420!3.20e-16!9;UBERON:0007245!3.20e-16!9;UBERON:0010009!3.20e-16!9;UBERON:0010011!3.20e-16!9;UBERON:0000454!3.20e-16!9;UBERON:0000200!4.24e-16!6;UBERON:0001871!2.15e-15!7;UBERON:0000025!2.69e-14!194;UBERON:0002021!1.20e-13!5;UBERON:0000064!1.22e-13!219;UBERON:0001872!1.40e-13!5;UBERON:0002308!4.82e-12!9;UBERON:0000125!4.82e-12!9;UBERON:0009663!6.87e-12!7;UBERON:0004111!2.52e-11!241;UBERON:0000477!8.64e-11!286;UBERON:0000483!1.14e-09!309;UBERON:0004733!1.30e-09!12;UBERON:0002028!1.30e-09!12;UBERON:0007277!1.30e-09!12;UBERON:0000119!1.88e-09!312;UBERON:0000481!2.67e-09!347;UBERON:0000062!4.61e-09!511;UBERON:0004732!8.82e-09!13;UBERON:0002771!1.10e-08!3;UBERON:0000475!2.60e-08!365;UBERON:0000349!3.11e-08!5;UBERON:0003076!1.87e-07!15;UBERON:0003057!1.87e-07!15;UBERON:0000922!3.76e-07!612;UBERON:0002680!4.18e-07!9;UBERON:0001895!4.18e-07!9;UBERON:0010092!4.18e-07!9;UBERON:0002298!4.20e-07!8;UBERON:0000923!5.88e-07!604;UBERON:0005291!5.88e-07!604;UBERON:0006598!5.88e-07!604;UBERON:0002532!5.88e-07!604;UBERON:0002050!6.46e-07!605;UBERON:0005423!6.46e-07!605|ontology_enrichment_uberon_v019=UBERON:0001950;1.10e-73;20!UBERON:0002619;4.84e-67;22!UBERON:0001869;3.90e-60;32!UBERON:0000956;5.43e-59;25!UBERON:0000203;5.43e-59;25!UBERON:0001893;2.11e-56;34!UBERON:0002791;9.06e-53;32!UBERON:0003528;1.73e-48;34!UBERON:0002020;1.73e-48;34!UBERON:0002780;2.58e-37;41!UBERON:0001890;2.58e-37;41!UBERON:0001872;3.46e-35;5!UBERON:0000073;5.83e-35;53!UBERON:0002616;5.83e-35;53!UBERON:0000200;9.19e-30;6!UBERON:0001017;1.73e-24;75!UBERON:0000955;8.27e-24;68!UBERON:0002021;1.60e-23;5!UBERON:0001870;1.95e-22;3!UBERON:0001016;1.31e-20;83!UBERON:0002702;2.08e-15;2!UBERON:0002037;6.09e-12;6!UBERON:0007023;4.33e-11;114!UBERON:0004733;4.61e-10;12!UBERON:0002028;4.61e-10;12!UBERON:0004732;2.69e-09;13!UBERON:0002902;6.50e-09;1!UBERON:0009899;6.50e-09;1!UBERON:0002022;8.77e-09;1!UBERON:0007190;8.77e-09;1!UBERON:0002581;1.47e-08;1!UBERON:0001882;3.05e-08;1!UBERON:0005403;3.05e-08;1!UBERON:0002680;4.10e-08;9!UBERON:0001895;4.10e-08;9!UBERON:0011216;9.80e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.01e-74,20;UBERON:0002619,4.03e-67,22;UBERON:0001869,1.28e-66,32;UBERON:0000073,3.97e-66,53;UBERON:0002616,3.97e-66,53;UBERON:0001893,1.26e-62,34;UBERON:0001049,1.93e-62,56;UBERON:0005068,1.93e-62,56;UBERON:0006241,1.93e-62,56;UBERON:0007135,1.93e-62,56;UBERON:0002791,4.10e-59,32;UBERON:0000956,4.62e-59,25;UBERON:0000203,4.62e-59,25;UBERON:0002780,1.18e-57,41;UBERON:0001890,1.18e-57,41;UBERON:0003080,1.18e-57,41;UBERON:0006240,1.18e-57,41;UBERON:0003528,1.48e-55,34;UBERON:0002020,1.48e-55,34;UBERON:0000955,7.96e-55,68;UBERON:0006238,7.96e-55,68;UBERON:0001017,8.91e-50,81;UBERON:0001016,1.68e-44,89;UBERON:0003075,1.24e-41,82;UBERON:0007284,1.24e-41,82;UBERON:0002346,1.55e-39,86;UBERON:0003056,6.27e-38,61;UBERON:0001872,3.72e-35,5;UBERON:0010371,4.61e-32,104;UBERON:0000200,5.36e-30,6;UBERON:0007023,2.68e-29,114;UBERON:0010314,1.89e-24,132;UBERON:0002021,2.14e-23,5;UBERON:0001870,1.57e-22,3;UBERON:0004121,1.59e-21,171;UBERON:0000924,1.59e-21,171;UBERON:0006601,1.59e-21,171;UBERON:0000025,3.32e-17,192;UBERON:0011216,4.88e-17,223;UBERON:0002702,1.80e-15,2;UBERON:0004111,6.48e-13,240;UBERON:0002037,5.88e-12,6;UBERON:0006215,5.88e-12,6;UBERON:0004733,4.61e-10,12;UBERON:0002028,4.61e-10,12;UBERON:0007277,4.61e-10,12;UBERON:0004732,2.69e-09,13;UBERON:0000483,3.44e-09,306;UBERON:0000119,4.66e-09,309;UBERON:0002902,7.01e-09,1;UBERON:0009899,7.01e-09,1;UBERON:0007190,8.78e-09,1;UBERON:0002022,9.46e-09,1;UBERON:0002581,1.10e-08,1;UBERON:0001882,2.29e-08,1;UBERON:0005403,2.29e-08,1;UBERON:0002680,4.01e-08,9;UBERON:0001895,4.01e-08,9;UBERON:0010092,4.01e-08,9;UBERON:0003076,4.53e-08,15;UBERON:0003057,4.53e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.41197055220813,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,6.10326945268333,7.85112745511695,6.2064999980245,2.63262476584767,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.337005664903385,0,0.937057782901357,0,0,0,0.394584402849391,0,0.61214552326098,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,3.73533696139684,0,0,0,0,0,0,1.20116498503375,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,3.15897694621728,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.83039397352945,2.50381861413,0,1.22021956690538,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,1.92687675289379,1.41696576325585,2.39450788585727,4.1023272848151,0.756215088665154,6.01668096438696,0.968853873791107,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,3.51195440015652,1.56215619722769,2.27355476151302,2.7902956485319,1.09394961803644,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.339848664884159,2.89400203676536,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,2.92363407820933,0.436350690340377,0.5290268405154,0,0,0,0,0,2.4072715192173,0,0,0,0,0.0757786982182394,0.267964130156178,1.65833887891756,0.310298987585686,0,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@GABRB2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2561 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4082 | |||
|TSSclassifier=S | |||
|UniProt=P47870 | |||
|association_with_transcript=-131bp_to_ENST00000353437_5end | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_5_at_GABRB2_5end | |||
|id=chr5:160975364..160975379,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.47e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.84e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.49e-23;3!UBERON:0006601;2.12e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@GABRB2 | |||
}} |
Revision as of 14:32, 13 September 2013
Short description: | p5@GABRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GABRB2_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | -131bp_to_ENST00000353437_5end |
EntrezGene: | GABRB2 |
HGNC: | 4082 |
UniProt: | P47870 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.84e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.