FFCP PHASE1:Mm9::chr17:31772973..31772975,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=120|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:31772973..31772975,+|id=chr17:31772973..31772975,+|ontology_enrichment_celltype=CL:0000181!9.20e-19!5;CL:0000417!9.20e-19!5;CL:0000668!9.20e-19!5;CL:0000412!9.20e-19!5;CL:0000182!9.20e-19!5;CL:0000414!1.22e-08!11;CL:0000057!4.68e-07!1;CL:0000632!4.68e-07!1|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-18,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.20e-24!22;UBERON:0007499!1.20e-24!22;UBERON:0006925!1.20e-24!22;UBERON:0009497!1.20e-24!22;UBERON:0000015!1.20e-24!22;UBERON:0002423!1.20e-24!22;UBERON:0006235!1.20e-24!22;UBERON:0008835!1.20e-24!22;UBERON:0003894!1.20e-24!22;UBERON:0004161!1.20e-24!22;UBERON:0008836!1.20e-24!22;UBERON:0009854!1.59e-23!23;UBERON:0009856!1.59e-23!23;UBERON:0002365!1.51e-21!25;UBERON:0002330!1.51e-21!25;UBERON:0003914!7.20e-11!47;UBERON:0005256!7.20e-11!47;UBERON:0005172!2.26e-10!49;UBERON:0005173!2.26e-10!49;UBERON:0002417!2.26e-10!49;UBERON:0000916!2.26e-10!49;UBERON:0005057!6.51e-10!51;UBERON:0003929!4.29e-09!55;UBERON:0002368!3.18e-08!60;UBERON:0002530!1.74e-07!65;UBERON:0000490!2.37e-07!66;UBERON:0009569!2.37e-07!66;UBERON:0005911!5.67e-07!69;UBERON:0002405!7.47e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.26e-16,22;UBERON:0007499,1.26e-16,22;UBERON:0006925,1.26e-16,22;UBERON:0009497,1.26e-16,22;UBERON:0000015,1.26e-16,22;UBERON:0002423,1.26e-16,22;UBERON:0006235,1.26e-16,22;UBERON:0008835,1.26e-16,22;UBERON:0003894,1.26e-16,22;UBERON:0004161,1.26e-16,22;UBERON:0008836,1.26e-16,22;UBERON:0009854,6.04e-16,23;UBERON:0009856,6.04e-16,23;UBERON:0002365,9.61e-15,25;UBERON:0002330,9.61e-15,25;UBERON:0005256,1.45e-08,45;UBERON:0003914,3.12e-08,47;UBERON:0005172,6.29e-08,49;UBERON:0005173,6.29e-08,49;UBERON:0002417,6.29e-08,49;UBERON:0000916,6.29e-08,49;UBERON:0003929,3.83e-07,55|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0.539703191637817,0.649776417447669,2.24013443548668,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,1.26289438973556,0.538192240565737,5.30687873499704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:31772973..31772975,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=120 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:31772973..31772975,+ | |||
|id=chr17:31772973..31772975,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.20e-19!5;CL:0000417!9.20e-19!5;CL:0000668!9.20e-19!5;CL:0000412!9.20e-19!5;CL:0000182!9.20e-19!5;CL:0000414!1.22e-08!11;CL:0000057!4.68e-07!1;CL:0000632!4.68e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.13e-18,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.20e-24!22;UBERON:0007499!1.20e-24!22;UBERON:0006925!1.20e-24!22;UBERON:0009497!1.20e-24!22;UBERON:0000015!1.20e-24!22;UBERON:0002423!1.20e-24!22;UBERON:0006235!1.20e-24!22;UBERON:0008835!1.20e-24!22;UBERON:0003894!1.20e-24!22;UBERON:0004161!1.20e-24!22;UBERON:0008836!1.20e-24!22;UBERON:0009854!1.59e-23!23;UBERON:0009856!1.59e-23!23;UBERON:0002365!1.51e-21!25;UBERON:0002330!1.51e-21!25;UBERON:0003914!7.20e-11!47;UBERON:0005256!7.20e-11!47;UBERON:0005172!2.26e-10!49;UBERON:0005173!2.26e-10!49;UBERON:0002417!2.26e-10!49;UBERON:0000916!2.26e-10!49;UBERON:0005057!6.51e-10!51;UBERON:0003929!4.29e-09!55;UBERON:0002368!3.18e-08!60;UBERON:0002530!1.74e-07!65;UBERON:0000490!2.37e-07!66;UBERON:0009569!2.37e-07!66;UBERON:0005911!5.67e-07!69;UBERON:0002405!7.47e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.26e-16,22;UBERON:0007499,1.26e-16,22;UBERON:0006925,1.26e-16,22;UBERON:0009497,1.26e-16,22;UBERON:0000015,1.26e-16,22;UBERON:0002423,1.26e-16,22;UBERON:0006235,1.26e-16,22;UBERON:0008835,1.26e-16,22;UBERON:0003894,1.26e-16,22;UBERON:0004161,1.26e-16,22;UBERON:0008836,1.26e-16,22;UBERON:0009854,6.04e-16,23;UBERON:0009856,6.04e-16,23;UBERON:0002365,9.61e-15,25;UBERON:0002330,9.61e-15,25;UBERON:0005256,1.45e-08,45;UBERON:0003914,3.12e-08,47;UBERON:0005172,6.29e-08,49;UBERON:0005173,6.29e-08,49;UBERON:0002417,6.29e-08,49;UBERON:0000916,6.29e-08,49;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0.539703191637817,0.649776417447669,2.24013443548668,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,1.26289438973556,0.538192240565737,5.30687873499704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:31772973..31772975,+ | |||
}} |
Revision as of 14:04, 13 September 2013
Short description: | p@chr17:31772973..31772975, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:31772973..31772975, + |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.13e-18 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.26e-16 | 22 |
epithelial sac | 1.26e-16 | 22 |
digestive gland | 1.26e-16 | 22 |
epithelium of foregut-midgut junction | 1.26e-16 | 22 |
anatomical boundary | 1.26e-16 | 22 |
hepatobiliary system | 1.26e-16 | 22 |
foregut-midgut junction | 1.26e-16 | 22 |
hepatic diverticulum | 1.26e-16 | 22 |
liver primordium | 1.26e-16 | 22 |
septum transversum | 1.26e-16 | 22 |
liver bud | 1.26e-16 | 22 |
digestive tract diverticulum | 6.04e-16 | 23 |
sac | 6.04e-16 | 23 |
exocrine gland | 9.61e-15 | 25 |
exocrine system | 9.61e-15 | 25 |
trunk mesenchyme | 1.45e-08 | 45 |
epithelial tube | 3.12e-08 | 47 |
abdomen element | 6.29e-08 | 49 |
abdominal segment element | 6.29e-08 | 49 |
abdominal segment of trunk | 6.29e-08 | 49 |
abdomen | 6.29e-08 | 49 |
gut epithelium | 3.83e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.